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PMC:7143707 / 6431-10928 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
128 124-128 Species denotes OSHA Tax:54719
129 110-118 Disease denotes COVID-19 MESH:C000657245
131 974-977 Chemical denotes oil MESH:D009821
134 1550-1554 Species denotes OSHA Tax:54719
135 1627-1631 Species denotes OSHA Tax:54719
138 3323-3329 Species denotes banana Tax:4641
139 3306-3321 Chemical denotes isoamyl acetate MESH:C020377

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T8 280-284 Body_part denotes skin http://purl.org/sig/ont/fma/fma7163
T9 709-713 Body_part denotes skin http://purl.org/sig/ont/fma/fma7163
T10 786-790 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T11 2572-2580 Body_part denotes Appendix http://purl.org/sig/ont/fma/fma14542
T12 2731-2735 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T13 3201-3208 Body_part denotes bearded http://purl.org/sig/ont/fma/fma54240
T14 4062-4073 Body_part denotes facial hair http://purl.org/sig/ont/fma/fma54360
T15 4395-4399 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T16 4482-4485 Body_part denotes eye http://purl.org/sig/ont/fma/fma54448

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T8 280-284 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T9 709-713 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T10 786-790 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T11 2731-2735 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T12 4395-4399 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T13 4482-4485 Body_part denotes eye http://purl.obolibrary.org/obo/UBERON_0000970

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T41 110-118 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T54 120-123 http://purl.obolibrary.org/obo/CLO_0008190 denotes Per
T55 167-173 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T56 186-187 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 216-222 http://purl.obolibrary.org/obo/OBI_0000968 denotes device
T58 248-249 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T59 280-284 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T60 280-284 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T61 280-284 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T62 280-284 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T63 280-284 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T64 380-384 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T65 517-523 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T66 604-605 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T67 651-652 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T68 701-702 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T69 709-713 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T70 709-713 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T71 709-713 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T72 709-713 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T73 709-713 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T74 757-764 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T75 786-790 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T76 885-886 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T77 1022-1025 http://purl.obolibrary.org/obo/CLO_0008724 denotes R95
T78 1026-1029 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T79 1271-1274 http://purl.obolibrary.org/obo/CLO_0008724 denotes R95
T80 1300-1301 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T81 1539-1541 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T82 1697-1698 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T83 1884-1891 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T84 1969-1970 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T85 2048-2052 http://purl.obolibrary.org/obo/CLO_0002860 denotes e)(2
T86 2134-2135 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T87 2261-2262 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T88 2414-2415 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T89 2484-2485 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T90 2567-2568 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T91 2649-2650 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T92 2714-2715 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T93 2731-2735 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T94 2835-2836 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T95 2886-2887 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T96 3015-3016 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T97 3173-3177 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T98 3220-3227 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T99 3423-3429 http://purl.obolibrary.org/obo/OBI_0000968 denotes device
T100 3444-3445 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T101 3475-3477 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T102 3488-3492 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T103 3610-3617 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T104 3681-3685 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T105 3814-3819 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T106 3841-3842 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T107 3942-3943 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T108 3961-3965 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T109 3971-3981 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing is
T110 4094-4095 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T111 4190-4191 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T112 4266-4273 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T113 4337-4341 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T114 4342-4348 http://purl.obolibrary.org/obo/OBI_0000968 denotes device
T115 4395-4399 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T116 4482-4485 http://www.ebi.ac.uk/efo/EFO_0000827 denotes eye

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T13 1086-1094 Chemical denotes solvents http://purl.obolibrary.org/obo/CHEBI_46787
T14 1532-1538 Chemical denotes Moldex http://purl.obolibrary.org/obo/CHEBI_31835
T15 3306-3321 Chemical denotes isoamyl acetate http://purl.obolibrary.org/obo/CHEBI_31725
T16 3314-3321 Chemical denotes acetate http://purl.obolibrary.org/obo/CHEBI_30089|http://purl.obolibrary.org/obo/CHEBI_47622
T18 3335-3344 Chemical denotes saccharin http://purl.obolibrary.org/obo/CHEBI_32111
T19 3345-3353 Chemical denotes solution http://purl.obolibrary.org/obo/CHEBI_75958
T20 3843-3848 Chemical denotes probe http://purl.obolibrary.org/obo/CHEBI_50406

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T2 129-140 http://purl.obolibrary.org/obo/GO_0065007 denotes regulations
T3 1933-1940 http://purl.obolibrary.org/obo/GO_0051235 denotes storage
T4 4122-4131 http://purl.obolibrary.org/obo/GO_0007585 denotes breathing

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T7 703-713 Phenotype denotes tight skin http://purl.obolibrary.org/obo/HP_0100679

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T48 0-16 Sentence denotes 8.1 Respiratory
T49 17-119 Sentence denotes N-95 respirators (see Fig 3 & Fig 3a & Fig. 4 15 ) are required for airborne protection from COVID-19.
T50 120-316 Sentence denotes Per OSHA regulations, HCW must be properly fit-tested with either a qualitative or quantitative device to ensure the mask makes a proper seal with the wearer's skin and offers adequate protection.
T51 317-385 Sentence denotes Users must be clean shaven for mask use as well as for the fit test.
T52 386-484 Sentence denotes Numerous brands are available from multiple manufacturers16 (see photos from NIOSH webiste below).
T53 485-579 Sentence denotes Users with beards cannot be fit tested with an N95, since an adequate seal is not possible17 .
T54 580-778 Sentence denotes HCW with beards can use a powered air-purifying respirator (PAPR) with a hood, since these function without the need for a tight skin seal and therefore also do not require fit testing (see photos).
T55 779-830 Sentence denotes Fig. 4 face shield and N95 for airborne protection.
T56 831-1018 Sentence denotes N95 designation is from NIOSH, meaning it is actually a dust-mist respirator which filters out 95% of small particles, but is not resistant to oil (N= Not; 95= 95% filtration efficiency).
T57 1019-1112 Sentence denotes An R95 has the same filtering capacity but is recommended for oily solvents (R= recommended).
T58 1113-1235 Sentence denotes Higher designations such as P100 mean they filter out 99.99% of particles (P= particles; 100=essentially 100% efficiency).
T59 1236-1445 Sentence denotes Higher levels of protection (i.e., R95, P100) are acceptable if a situation calls for N95 and an N95 is not available, but lower levels of protection (i.e., simple procedure or surgical mask) are not (Fig. 9).
T60 1446-1488 Sentence denotes Some of the styles of N95 masks available:
T61 1489-1543 Sentence denotes Photos courtesy of 3M, Kimberly-Clark, and Moldex 18 .
T62 1544-1676 Sentence denotes Since OSHA declares N95 masks for HCW as respirators, their use is governed by the OSHA Respiratory Protection Standard 1910.13419 .
T63 1677-1785 Sentence denotes Employers must have a program in place with the following components:• Written worksite specific procedures;
T64 1786-1807 Sentence denotes • Program evaluation;
T65 1808-1866 Sentence denotes • Selection of an appropriate respirator approved by NIOSH
T66 1867-1877 Sentence denotes • Training
T67 1878-1891 Sentence denotes • Fit testing
T68 1892-2006 Sentence denotes • Inspection, cleaning, maintenance, and storage (for loose-fitting hoods- N/A to disposable single-use N95 masks)
T69 2007-2028 Sentence denotes • Medical evaluations
T70 2029-2382 Sentence denotes Paragraph 1910.134(e)(2)(i) of the standard explains that the medical evaluations are to be performed by a physician or other licensed health care professional (PLHCP) identified by the employer to perform medical evaluations using a medical questionnaire or an initial medical examination that obtains the same information as the medical questionnaire.
T71 2383-2681 Sentence denotes The employer shall ensure that a follow-up medical examination is provided for an employee who gives a positive response to any question among questions 1 through 8 in Section 2, Part A of Appendix C 20 or whose initial medical examination demonstrates the need for a follow-up medical examination.
T72 2682-2806 Sentence denotes Questions 10-15 and all of part B regarding full-face respirators do not apply to HCW using N95 or loose fitting PAPR hoods.
T73 2807-3085 Sentence denotes Since the N95 respirator is a negative pressure respirator, if the PLHCP finds a medical condition that may place the employee's health at increased risk if the respirator is used, the employer shall provide a PAPR (such as the hood described above and pictured in Fig. 5, Figs.
T74 3086-3099 Sentence denotes 5 and 6 21 ).
T75 3100-3108 Sentence denotes Fig. 5 .
T76 3109-3114 Sentence denotes Figs.
T77 3115-3215 Sentence denotes 5 and 6 PAPR loose fitting hood with HEPA filters (no fit test required; suitable for bearded HCWs).
T78 3216-3479 Sentence denotes Fit testing for the N95 respirators is required, but can be performed qualitatively using isoamyl acetate (banana oi), saccharin solution, or Bitrex© Fig. 4a (see Fig. 4a), or quantitative using an approved device, such as Port-a-Count® (see Fig. 7, Fig. 8 ) 22 .
T79 3480-3597 Sentence denotes The fit test must be performed with exact make, model, and size of respirator the HCW with be using in the workplace.
T80 3598-3796 Sentence denotes Qualitative testing does not compromise the mask integrity and therefore after the test the employee can take the N95 with them for future single use (important consideration in time sof shortages).
T81 3797-3966 Sentence denotes Quantitative fit tests require insertion of a probe through the mask, compromising mask integrity, and therefore the N95 must be discarded after a quantitative fit test.
T82 3967-4254 Sentence denotes Fit testing is not required for loose-fitting PAPR hoods (which are used primarily by HCW with facial hair that does not allow a proper seal), because the breathing zone environment is under positive pressure and therefore a tight seal is not required for proper function and protection.
T83 4255-4300 Sentence denotes Fig. 7 Fit testing N95 mask with PortaCount®.
T84 4301-4349 Sentence denotes Fig. 8 Portacount® quantitative fit test device.
T85 4350-4420 Sentence denotes Fig. 9 Simple procedure mask with integrated face shield (not an N95).
T86 4421-4444 Sentence denotes Used by general public.
T87 4445-4497 Sentence denotes This could be worn on top of N95 for eye protection.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T67 110-118 SP_7 denotes COVID-19
T68 589-595 UBERON:0001037 denotes beards
T70 1086-1094 CHEBI:46787;CHEBI:46787 denotes solvents
T71 2572-2580 UBERON:0004529 denotes Appendix
T72 3306-3321 CHEBI:31725;CHEBI:31725 denotes isoamyl acetate
T73 3335-3344 CHEBI:32111;CHEBI:32111 denotes saccharin
T74 3345-3353 CHEBI:75958;CHEBI:75958 denotes solution
T75 4062-4068 UBERON:0001456 denotes facial
T76 4069-4073 UBERON:0001037 denotes hair
T77 4395-4399 UBERON:0001456 denotes face
T78 4482-4485 UBERON:0000970 denotes eye