> top > docs > PMC:7143707 > spans > 6391-10928 > annotations

PMC:7143707 / 6391-10928 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
128 164-168 Species denotes OSHA Tax:54719
129 150-158 Disease denotes COVID-19 MESH:C000657245
131 1014-1017 Chemical denotes oil MESH:D009821
134 1590-1594 Species denotes OSHA Tax:54719
135 1667-1671 Species denotes OSHA Tax:54719
138 3363-3369 Species denotes banana Tax:4641
139 3346-3361 Chemical denotes isoamyl acetate MESH:C020377

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T8 320-324 Body_part denotes skin http://purl.org/sig/ont/fma/fma7163
T9 749-753 Body_part denotes skin http://purl.org/sig/ont/fma/fma7163
T10 826-830 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T11 2612-2620 Body_part denotes Appendix http://purl.org/sig/ont/fma/fma14542
T12 2771-2775 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T13 3241-3248 Body_part denotes bearded http://purl.org/sig/ont/fma/fma54240
T14 4102-4113 Body_part denotes facial hair http://purl.org/sig/ont/fma/fma54360
T15 4435-4439 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T16 4522-4525 Body_part denotes eye http://purl.org/sig/ont/fma/fma54448

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T8 320-324 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T9 749-753 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T10 826-830 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T11 2771-2775 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T12 4435-4439 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T13 4522-4525 Body_part denotes eye http://purl.obolibrary.org/obo/UBERON_0000970

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T41 150-158 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T54 160-163 http://purl.obolibrary.org/obo/CLO_0008190 denotes Per
T55 207-213 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T56 226-227 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 256-262 http://purl.obolibrary.org/obo/OBI_0000968 denotes device
T58 288-289 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T59 320-324 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T60 320-324 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T61 320-324 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T62 320-324 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T63 320-324 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T64 420-424 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T65 557-563 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T66 644-645 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T67 691-692 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T68 741-742 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T69 749-753 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T70 749-753 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T71 749-753 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T72 749-753 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T73 749-753 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T74 797-804 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T75 826-830 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T76 925-926 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T77 1062-1065 http://purl.obolibrary.org/obo/CLO_0008724 denotes R95
T78 1066-1069 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T79 1311-1314 http://purl.obolibrary.org/obo/CLO_0008724 denotes R95
T80 1340-1341 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T81 1579-1581 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T82 1737-1738 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T83 1924-1931 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T84 2009-2010 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T85 2088-2092 http://purl.obolibrary.org/obo/CLO_0002860 denotes e)(2
T86 2174-2175 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T87 2301-2302 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T88 2454-2455 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T89 2524-2525 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T90 2607-2608 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T91 2689-2690 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T92 2754-2755 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T93 2771-2775 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T94 2875-2876 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T95 2926-2927 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T96 3055-3056 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T97 3213-3217 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T98 3260-3267 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T99 3463-3469 http://purl.obolibrary.org/obo/OBI_0000968 denotes device
T100 3484-3485 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T101 3515-3517 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T102 3528-3532 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T103 3650-3657 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T104 3721-3725 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T105 3854-3859 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T106 3881-3882 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T107 3982-3983 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T108 4001-4005 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T109 4011-4021 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing is
T110 4134-4135 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T111 4230-4231 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T112 4306-4313 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T113 4377-4381 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T114 4382-4388 http://purl.obolibrary.org/obo/OBI_0000968 denotes device
T115 4435-4439 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T116 4522-4525 http://www.ebi.ac.uk/efo/EFO_0000827 denotes eye

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T13 1126-1134 Chemical denotes solvents http://purl.obolibrary.org/obo/CHEBI_46787
T14 1572-1578 Chemical denotes Moldex http://purl.obolibrary.org/obo/CHEBI_31835
T15 3346-3361 Chemical denotes isoamyl acetate http://purl.obolibrary.org/obo/CHEBI_31725
T16 3354-3361 Chemical denotes acetate http://purl.obolibrary.org/obo/CHEBI_30089|http://purl.obolibrary.org/obo/CHEBI_47622
T18 3375-3384 Chemical denotes saccharin http://purl.obolibrary.org/obo/CHEBI_32111
T19 3385-3393 Chemical denotes solution http://purl.obolibrary.org/obo/CHEBI_75958
T20 3883-3888 Chemical denotes probe http://purl.obolibrary.org/obo/CHEBI_50406

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T2 169-180 http://purl.obolibrary.org/obo/GO_0065007 denotes regulations
T3 1973-1980 http://purl.obolibrary.org/obo/GO_0051235 denotes storage
T4 4162-4171 http://purl.obolibrary.org/obo/GO_0007585 denotes breathing

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T7 743-753 Phenotype denotes tight skin http://purl.obolibrary.org/obo/HP_0100679

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T47 0-38 Sentence denotes 8 Personal Protective Equipment (PPE)
T48 40-56 Sentence denotes 8.1 Respiratory
T49 57-159 Sentence denotes N-95 respirators (see Fig 3 & Fig 3a & Fig. 4 15 ) are required for airborne protection from COVID-19.
T50 160-356 Sentence denotes Per OSHA regulations, HCW must be properly fit-tested with either a qualitative or quantitative device to ensure the mask makes a proper seal with the wearer's skin and offers adequate protection.
T51 357-425 Sentence denotes Users must be clean shaven for mask use as well as for the fit test.
T52 426-524 Sentence denotes Numerous brands are available from multiple manufacturers16 (see photos from NIOSH webiste below).
T53 525-619 Sentence denotes Users with beards cannot be fit tested with an N95, since an adequate seal is not possible17 .
T54 620-818 Sentence denotes HCW with beards can use a powered air-purifying respirator (PAPR) with a hood, since these function without the need for a tight skin seal and therefore also do not require fit testing (see photos).
T55 819-870 Sentence denotes Fig. 4 face shield and N95 for airborne protection.
T56 871-1058 Sentence denotes N95 designation is from NIOSH, meaning it is actually a dust-mist respirator which filters out 95% of small particles, but is not resistant to oil (N= Not; 95= 95% filtration efficiency).
T57 1059-1152 Sentence denotes An R95 has the same filtering capacity but is recommended for oily solvents (R= recommended).
T58 1153-1275 Sentence denotes Higher designations such as P100 mean they filter out 99.99% of particles (P= particles; 100=essentially 100% efficiency).
T59 1276-1485 Sentence denotes Higher levels of protection (i.e., R95, P100) are acceptable if a situation calls for N95 and an N95 is not available, but lower levels of protection (i.e., simple procedure or surgical mask) are not (Fig. 9).
T60 1486-1528 Sentence denotes Some of the styles of N95 masks available:
T61 1529-1583 Sentence denotes Photos courtesy of 3M, Kimberly-Clark, and Moldex 18 .
T62 1584-1716 Sentence denotes Since OSHA declares N95 masks for HCW as respirators, their use is governed by the OSHA Respiratory Protection Standard 1910.13419 .
T63 1717-1825 Sentence denotes Employers must have a program in place with the following components:• Written worksite specific procedures;
T64 1826-1847 Sentence denotes • Program evaluation;
T65 1848-1906 Sentence denotes • Selection of an appropriate respirator approved by NIOSH
T66 1907-1917 Sentence denotes • Training
T67 1918-1931 Sentence denotes • Fit testing
T68 1932-2046 Sentence denotes • Inspection, cleaning, maintenance, and storage (for loose-fitting hoods- N/A to disposable single-use N95 masks)
T69 2047-2068 Sentence denotes • Medical evaluations
T70 2069-2422 Sentence denotes Paragraph 1910.134(e)(2)(i) of the standard explains that the medical evaluations are to be performed by a physician or other licensed health care professional (PLHCP) identified by the employer to perform medical evaluations using a medical questionnaire or an initial medical examination that obtains the same information as the medical questionnaire.
T71 2423-2721 Sentence denotes The employer shall ensure that a follow-up medical examination is provided for an employee who gives a positive response to any question among questions 1 through 8 in Section 2, Part A of Appendix C 20 or whose initial medical examination demonstrates the need for a follow-up medical examination.
T72 2722-2846 Sentence denotes Questions 10-15 and all of part B regarding full-face respirators do not apply to HCW using N95 or loose fitting PAPR hoods.
T73 2847-3125 Sentence denotes Since the N95 respirator is a negative pressure respirator, if the PLHCP finds a medical condition that may place the employee's health at increased risk if the respirator is used, the employer shall provide a PAPR (such as the hood described above and pictured in Fig. 5, Figs.
T74 3126-3139 Sentence denotes 5 and 6 21 ).
T75 3140-3148 Sentence denotes Fig. 5 .
T76 3149-3154 Sentence denotes Figs.
T77 3155-3255 Sentence denotes 5 and 6 PAPR loose fitting hood with HEPA filters (no fit test required; suitable for bearded HCWs).
T78 3256-3519 Sentence denotes Fit testing for the N95 respirators is required, but can be performed qualitatively using isoamyl acetate (banana oi), saccharin solution, or Bitrex© Fig. 4a (see Fig. 4a), or quantitative using an approved device, such as Port-a-Count® (see Fig. 7, Fig. 8 ) 22 .
T79 3520-3637 Sentence denotes The fit test must be performed with exact make, model, and size of respirator the HCW with be using in the workplace.
T80 3638-3836 Sentence denotes Qualitative testing does not compromise the mask integrity and therefore after the test the employee can take the N95 with them for future single use (important consideration in time sof shortages).
T81 3837-4006 Sentence denotes Quantitative fit tests require insertion of a probe through the mask, compromising mask integrity, and therefore the N95 must be discarded after a quantitative fit test.
T82 4007-4294 Sentence denotes Fit testing is not required for loose-fitting PAPR hoods (which are used primarily by HCW with facial hair that does not allow a proper seal), because the breathing zone environment is under positive pressure and therefore a tight seal is not required for proper function and protection.
T83 4295-4340 Sentence denotes Fig. 7 Fit testing N95 mask with PortaCount®.
T84 4341-4389 Sentence denotes Fig. 8 Portacount® quantitative fit test device.
T85 4390-4460 Sentence denotes Fig. 9 Simple procedure mask with integrated face shield (not an N95).
T86 4461-4484 Sentence denotes Used by general public.
T87 4485-4537 Sentence denotes This could be worn on top of N95 for eye protection.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T67 150-158 SP_7 denotes COVID-19
T68 629-635 UBERON:0001037 denotes beards
T70 1126-1134 CHEBI:46787;CHEBI:46787 denotes solvents
T71 2612-2620 UBERON:0004529 denotes Appendix
T72 3346-3361 CHEBI:31725;CHEBI:31725 denotes isoamyl acetate
T73 3375-3384 CHEBI:32111;CHEBI:32111 denotes saccharin
T74 3385-3393 CHEBI:75958;CHEBI:75958 denotes solution
T75 4102-4108 UBERON:0001456 denotes facial
T76 4109-4113 UBERON:0001037 denotes hair
T77 4435-4439 UBERON:0001456 denotes face
T78 4522-4525 UBERON:0000970 denotes eye