PMC:7140597 / 9480-9702
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
116 | 50-82 | Gene | denotes | ORF1ab: ORF encoding polyprotein | Gene:43740578 |
117 | 3-15 | Gene | denotes | nucleocapsid | Gene:43740575 |
118 | 109-119 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
119 | 121-166 | Species | denotes | severe acute respiratory syndrome coronavirus | Tax:694009 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T46 | 16-23 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T47 | 95-107 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T26 | 109-117 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T27 | 118-166 | Disease | denotes | 2: severe acute respiratory syndrome coronavirus | http://purl.obolibrary.org/obo/MONDO_0100096 |
T28 | 121-154 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T18 | 16-23 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T19 | 95-107 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T67 | 0-222 | Sentence | denotes | N: nucleocapsid protein; ORF: open reading frame; ORF1ab: ORF encoding polyprotein; S: surface glycoprotein; SARS-CoV-2: severe acute respiratory syndrome coronavirus; SNP: single nt polymorphism; UTR: untranslated region. |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T81 | 3-23 | PG_4 | denotes | nucleocapsid protein |
T82 | 25-28 | SO:0000236 | denotes | ORF |
T83 | 30-48 | SO:0000236 | denotes | open reading frame |
T84 | 58-61 | SO:0000236 | denotes | ORF |
T85 | 87-94 | GO:0009986 | denotes | surface |
T86 | 95-107 | CHEBI:17089;BV_11;CHEBI:17089 | denotes | glycoprotein |
T87 | 109-119 | SP_7 | denotes | SARS-CoV-2 |
T88 | 121-133 | SP_10 | denotes | severe acute |
T89 | 134-145 | SP_10;GO:0045333 | denotes | respiratory |
T90 | 146-166 | SP_10 | denotes | syndrome coronavirus |
T91 | 168-171 | SO:0000694 | denotes | SNP |
T92 | 173-179 | SO:0000984 | denotes | single |
T93 | 197-200 | SO:0000203 | denotes | UTR |
T94 | 202-214 | GO:0006412;SO:0000203 | denotes | untranslated |
T95 | 215-221 | SO:0000203 | denotes | region |
T91217 | 3-23 | PG_4 | denotes | nucleocapsid protein |
T59024 | 25-28 | SO:0000236 | denotes | ORF |
T73720 | 30-48 | SO:0000236 | denotes | open reading frame |
T97869 | 58-61 | SO:0000236 | denotes | ORF |
T1631 | 87-94 | GO:0009986 | denotes | surface |
T5223 | 95-107 | CHEBI:17089;BV_11;CHEBI:17089 | denotes | glycoprotein |
T36038 | 109-119 | SP_7 | denotes | SARS-CoV-2 |
T69447 | 121-133 | SP_10 | denotes | severe acute |
T347 | 134-145 | SP_10;GO:0045333 | denotes | respiratory |
T36070 | 146-166 | SP_10 | denotes | syndrome coronavirus |
T97368 | 168-171 | SO:0000694 | denotes | SNP |
T83634 | 173-179 | SO:0000984 | denotes | single |
T75808 | 197-200 | SO:0000203 | denotes | UTR |
T28454 | 202-214 | GO:0006412;SO:0000203 | denotes | untranslated |
T3332 | 215-221 | SO:0000203 | denotes | region |