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{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7140597","sourcedb":"PMC","sourceid":"7140597","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7140597","text":"Whole genome and phylogenetic analysis of two SARS-CoV-2 strains isolated in Italy in January and February 2020: additional clues on multiple introductions and further circulation in Europe\n\nAbstract\nWhole genome sequences of SARS-CoV-2 obtained from two patients, a Chinese tourist visiting Rome and an Italian, were compared with sequences from Europe and elsewhere. In a phylogenetic tree, the Italian patient’s sequence clustered with sequences from Germany while the tourist’s sequence clustered with other European sequences. 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