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PMC:7134578 / 7772-12889 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
168 29-37 Disease denotes COVID 19 MESH:C000657245
169 49-55 Disease denotes cancer MESH:D009369
172 207-215 Species denotes patients Tax:9606
173 200-206 Disease denotes cancer MESH:D009369
177 403-411 Species denotes patients Tax:9606
178 396-402 Disease denotes cancer MESH:D009369
179 758-764 Disease denotes cancer MESH:D009369
190 868-876 Species denotes patients Tax:9606
191 989-997 Species denotes patients Tax:9606
192 1087-1095 Species denotes patients Tax:9606
193 1545-1551 Species denotes people Tax:9606
194 1622-1630 Species denotes patients Tax:9606
195 1176-1184 Disease denotes COVID-19 MESH:C000657245
196 1185-1194 Disease denotes infection MESH:D007239
197 1207-1216 Disease denotes infection MESH:D007239
198 1229-1235 Disease denotes cancer MESH:D009369
199 1445-1451 Disease denotes cancer MESH:D009369
205 1861-1869 Species denotes patients Tax:9606
206 2189-2197 Species denotes patients Tax:9606
207 1786-1792 Disease denotes Cancer MESH:D009369
208 2182-2188 Disease denotes cancer MESH:D009369
209 2465-2473 Disease denotes COVID-19 MESH:C000657245
212 2886-2894 Species denotes patients Tax:9606
213 2922-2930 Species denotes patients Tax:9606
215 3074-3085 Species denotes coronavirus Tax:11118
218 3121-3138 Disease denotes Palliative cancer MESH:D009369
219 3155-3163 Disease denotes COVID-19 MESH:C000657245
222 3883-3891 Species denotes patients Tax:9606
223 3897-3905 Disease denotes COVID-19 MESH:C000657245
225 4046-4054 Species denotes patients Tax:9606
228 4216-4224 Species denotes patients Tax:9606
229 4230-4236 Disease denotes cancer MESH:D009369
234 3283-3291 Species denotes patients Tax:9606
235 3357-3363 Species denotes people Tax:9606
236 3276-3282 Disease denotes cancer MESH:D009369
237 3369-3375 Disease denotes cancer MESH:D009369
242 4340-4348 Disease denotes COVID-19 MESH:C000657245
243 4424-4430 Disease denotes deaths MESH:D003643
244 4436-4444 Disease denotes COVID-19 MESH:C000657245
245 4577-4583 Disease denotes cancer MESH:D009369
247 5107-5116 Disease denotes infection MESH:D007239

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T57 29-37 Disease denotes COVID 19 http://purl.obolibrary.org/obo/MONDO_0100096
T58 49-55 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T59 200-206 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T60 396-402 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T61 758-764 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T62 1176-1184 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T63 1185-1194 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T64 1207-1216 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T65 1229-1235 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T66 1445-1451 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T67 1786-1792 Disease denotes Cancer http://purl.obolibrary.org/obo/MONDO_0004992
T68 2182-2188 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T69 2465-2473 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T70 3132-3138 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T71 3155-3163 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T72 3276-3282 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T73 3369-3375 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T74 3897-3905 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T75 4230-4236 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T76 4340-4348 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T77 4436-4444 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T78 4577-4583 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T79 5107-5116 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T61 27-28 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T62 149-150 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T63 221-222 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T64 712-713 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T65 927-934 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T66 1344-1345 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T67 1760-1767 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T68 1827-1834 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T69 1920-1921 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T70 1990-1997 http://www.ebi.ac.uk/efo/EFO_0000881 denotes Digital
T71 2287-2288 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T72 2356-2363 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T73 2839-2840 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T74 2971-2972 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T75 3040-3054 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization’s
T76 3295-3296 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T77 3307-3309 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T78 3423-3424 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T79 3435-3437 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T80 3460-3461 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T81 3778-3785 http://purl.obolibrary.org/obo/CLO_0009985 denotes focused
T82 4188-4189 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T83 4525-4526 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T84 4560-4561 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T85 4891-4892 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T86 4911-4912 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T87 4918-4922 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T33 49-55 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T34 75-83 Phenotype denotes oncology http://purl.obolibrary.org/obo/HP_0002664
T35 200-206 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T36 396-402 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T37 758-764 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T38 771-779 Phenotype denotes Oncology http://purl.obolibrary.org/obo/HP_0002664
T39 1229-1235 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T40 1445-1451 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T41 1786-1792 Phenotype denotes Cancer http://purl.obolibrary.org/obo/HP_0002664
T42 1874-1882 Phenotype denotes oncology http://purl.obolibrary.org/obo/HP_0002664
T43 1944-1952 Phenotype denotes oncology http://purl.obolibrary.org/obo/HP_0002664
T44 2182-2188 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T45 3132-3138 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T46 3276-3282 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T47 3369-3375 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T48 4230-4236 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T49 4577-4583 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T50 0-18 Sentence denotes How do we respond?
T51 19-61 Sentence denotes Develop a COVID 19 policy for cancer care:
T52 62-191 Sentence denotes Establish an oncology multidisciplinary committee to create, review and rapidly update a clinical policy suitable to our setting.
T53 192-324 Sentence denotes Provide cancer patients with a cover note that enables seamless movement if they get stopped by law enforcement agents on the roads.
T54 325-387 Sentence denotes Strategise to reduce clinic visits and accelerate remote care:
T55 388-613 Sentence denotes Because cancer patients and caregivers are expectedly anxious whether they are symptomatic or not, and their genuine desire for improved survival; they will require information, counselling, symptomatic control and treatment.
T56 614-705 Sentence denotes Traditionally this is achieved through hospital visits but can be achieved by telemedicine.
T57 706-770 Sentence denotes It is a matter of urgency that we accelerate remote cancer care.
T58 771-859 Sentence denotes Oncology centres should within 72 hours transit to delivering 30-50% of services online.
T59 860-914 Sentence denotes Empower patients and caregivers through communication:
T60 915-1018 Sentence denotes Leverage on digital technologies to ensure we continue to communicate, to patients and with each other.
T61 1019-1255 Sentence denotes Bulk text messaging, email and or voice calls can ensure we provide patients with clear communication about how the hospital is responding to and preventing COVID-19 infection and how the infection will affect cancer care going forward.
T62 1256-1320 Sentence denotes This will keep them abreast of happenings and allay their fears.
T63 1321-1478 Sentence denotes For example, establish a clinical call centre manned by administrative and clinical staff knowledgeable in the provision of cancer care and support services.
T64 1479-1631 Sentence denotes This category of responders must be trained in client service and people relations as the bulk of the calls would be from agitated and worried patients.
T65 1632-1741 Sentence denotes This is so that the staff do not react in untoward ways to the emotion-laden calls they are bound to receive.
T66 1742-1785 Sentence denotes Leverage existing digital health platforms:
T67 1786-1989 Sentence denotes Cancer centres should integrate existing digital health platforms to limit patients and oncology professional’s physical interaction, a strategy that several oncology centres in the USA are adopting [9].
T68 1990-2091 Sentence denotes Digital platforms such as www.oncopadi.com already exist and were designed for low-resource settings.
T69 2092-2219 Sentence denotes They can provide telemedicine services, consultations, symptom control and counselling to cancer patients and their caregivers.
T70 2220-2579 Sentence denotes To facilitate the use of telehealth solutions across all contexts, a global directory of telehealth platforms is also being compiled by digital health experts which outlines multiple platforms (many are free) to support care delivery during the COVID-19 outbreak: https://docs.google.com/spreadsheets/d/1XMsJJIduO6yI_GEo1Vy_b_SXoz9YwbgtEL63-siNS_Q/edit#gid=0.
T71 2580-2591 Sentence denotes Administer:
T72 2592-2707 Sentence denotes Continue providing only emergencies and essential services such as radiotherapy under established safety protocols.
T73 2708-2794 Sentence denotes Switch: from systemic therapy to oral chemotherapy, and monitor side effects remotely.
T74 2795-2958 Sentence denotes This should be discussed and agreed upon by a multidisciplinary team and communicated with patients only if the pandemic stops patients from visiting the hospital.
T75 2959-3012 Sentence denotes This may be a better option than no treatment at all.
T76 3013-3119 Sentence denotes Practice: the World Health Organization’s advice on reducing coronavirus transmission for the public [10].
T77 3121-3172 Sentence denotes Palliative cancer care during the COVID-19 outbreak
T78 3173-3311 Sentence denotes Palliation is an ethical obligation and we should strive for good symptom control and comfort care for cancer patients in a pandemic [11].
T79 3312-3685 Sentence denotes To support palliative and supportive care of people with cancer, these proposed four areas (4S) for palliating a pandemic [11] can be used to guide a response but need to be adapted and considered in the context of the availability of resources and expertise in the context of low-resource settings: “Stuff” (i.e. stockpile of medications, equipment to deliver medications)
T80 3686-3906 Sentence denotes “Staff” (identifying and consulting with clinicians with palliative care expertise, deliver focused education sessions to frontline staff for symptom management and supporting end-of-life care for patients with COVID-19)
T81 3907-4071 Sentence denotes “Space” (e.g. identify wards and nonclinical areas in all health care facilities that would be appropriate to accommodate large numbers of patients expected to die)
T82 4072-4286 Sentence denotes “Systems” (e.g. develop systems for direct consultation of palliative care expertise for staff in hospitals, create a triage system to identify patients with cancer in need of specialist palliative care management)
T83 4287-4353 Sentence denotes Bereavement needs to be considered in the context of COVID-19 too.
T84 4354-4445 Sentence denotes Globally we are seeing increasing numbers of unexpected and premature deaths from COVID-19.
T85 4446-4584 Sentence denotes Families will need support with bereavement where they may have been expecting a longer trajectory of illness for a loved one with cancer.
T86 4585-4691 Sentence denotes Furthermore, traditional cultural rituals and ceremonies may be prohibited in line with social distancing.
T87 4692-4890 Sentence denotes We need talk to spiritual leaders to understand what can occur and provide guidance to the families of those who die to discuss how and when they might be able to hold services for their loved ones.
T88 4891-4952 Sentence denotes A time like this is a true test of leadership and our values.
T89 4953-5117 Sentence denotes As leaders we must make clinical and economical decisions in line with the ethical rationing of resources and the global call to flatten the curve of the infection.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T42 29-37 SP_7 denotes COVID 19
T43 591-598 GO:0065007 denotes control
T44 1176-1184 SP_7 denotes COVID-19
T45 1545-1551 NCBITaxon:9606 denotes people
T46 2155-2162 GO:0065007 denotes control
T47 2256-2265 CHEBI:75958;CHEBI:75958 denotes solutions
T48 2465-2473 SP_7 denotes COVID-19
T49 2492-2496 CHEBI:50845;CHEBI:50845 denotes docs
T50 2741-2745 UBERON:0000165 denotes oral
T51 3074-3085 NCBITaxon:11118 denotes coronavirus
T52 3155-3163 SP_7 denotes COVID-19
T53 3247-3254 GO:0065007 denotes control
T54 3357-3363 NCBITaxon:9606 denotes people
T55 3673-3684 CHEBI:23888;CHEBI:23888 denotes medications
T56 3866-3868 UBERON:0000323 denotes of
T57 3869-3873 UBERON:0000104 denotes life
T58 3897-3905 SP_7 denotes COVID-19
T59 4067-4070 GO:0016265 denotes die
T63 4340-4348 SP_7 denotes COVID-19
T64 4424-4430 GO:0016265 denotes deaths
T65 4436-4444 SP_7 denotes COVID-19
T66 4805-4808 GO:0016265 denotes die
T18909 29-37 SP_7 denotes COVID 19
T17827 591-598 GO:0065007 denotes control
T82314 1176-1184 SP_7 denotes COVID-19
T48125 1545-1551 NCBITaxon:9606 denotes people
T6845 2155-2162 GO:0065007 denotes control
T29200 2256-2265 CHEBI:75958;CHEBI:75958 denotes solutions
T8652 2465-2473 SP_7 denotes COVID-19
T13900 2492-2496 CHEBI:50845;CHEBI:50845 denotes docs
T37678 2741-2745 UBERON:0000165 denotes oral
T22160 3074-3085 NCBITaxon:11118 denotes coronavirus
T82376 3155-3163 SP_7 denotes COVID-19
T21028 3247-3254 GO:0065007 denotes control
T97688 3357-3363 NCBITaxon:9606 denotes people
T64263 3673-3684 CHEBI:23888;CHEBI:23888 denotes medications
T34552 3866-3868 UBERON:0000323 denotes of
T65117 3869-3873 UBERON:0000104 denotes life
T72097 3897-3905 SP_7 denotes COVID-19
T94543 4067-4070 GO:0016265 denotes die
T96411 4340-4348 SP_7 denotes COVID-19
T29732 4424-4430 GO:0016265 denotes deaths
T59504 4436-4444 SP_7 denotes COVID-19
T99816 4805-4808 GO:0016265 denotes die