> top > docs > PMC:7128678 > spans > 8439-9131 > annotations

PMC:7128678 / 8439-9131 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
276 267-280 Species denotes coronaviruses Tax:11118
283 95-106 Chemical denotes carboxylate
284 116-122 Chemical denotes Neu5Ac
285 310-344 Chemical denotes 9-O-acetyl-N-acetylneuraminic acid MESH:C025676
286 477-488 Chemical denotes sialic acid MESH:D019158
287 616-627 Chemical denotes carboxylate
288 641-652 Chemical denotes sialic acid MESH:D019158

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T190 116-122 PR:000002082 denotes Neu5Ac
T191 142-150 CHEBI:36916;CHEBI:36916 denotes cationic
T192 222-229 GO:0032991 denotes complex
T193 267-280 NCBITaxon:11118 denotes coronaviruses
T194 310-311 CHEBI:16066;CHEBI:16066 denotes 9
T195 314-320 CHEBI:40574;CHEBI:40574 denotes acetyl
T196 321-344 CHEBI:17012;CHEBI:17012 denotes N-acetylneuraminic acid
T197 477-488 CHEBI:26667;CHEBI:26667 denotes sialic acid
T198 628-633 CHEBI:24433;CHEBI:24433 denotes group
T199 641-652 CHEBI:26667;CHEBI:26667 denotes sialic acid
T200 673-687 CHEBI:64766;CHEBI:64766 denotes cationic group

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T41 321-344 Body_part denotes N-acetylneuraminic acid http://purl.org/sig/ont/fma/fma82788

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T54 13-14 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T55 15-16 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T56 377-378 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 490-491 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T58 545-548 http://purl.obolibrary.org/obo/CLO_0002755 denotes d–f
T59 585-587 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T134 107-112 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T135 116-122 Chemical denotes Neu5Ac http://purl.obolibrary.org/obo/CHEBI_17012|http://purl.obolibrary.org/obo/CHEBI_75133
T137 314-320 Chemical denotes acetyl http://purl.obolibrary.org/obo/CHEBI_40574|http://purl.obolibrary.org/obo/CHEBI_46887
T139 321-344 Chemical denotes N-acetylneuraminic acid http://purl.obolibrary.org/obo/CHEBI_17012
T140 340-344 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T141 477-488 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T142 484-488 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T143 628-633 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T144 641-652 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T145 648-652 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T146 673-687 Chemical denotes cationic group http://purl.obolibrary.org/obo/CHEBI_64766
T147 682-687 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T66 19-187 Sentence denotes The interaction was driven by the positioning of the negative charge of the carboxylate group of Neu5Ac and one of the two cationic charges of CLQ (pKa 10.2) Fig. 2(c).
T67 188-263 Sentence denotes The energy of interaction of this complex was estimated to be -47 kJ.mol−1.
T68 264-489 Sentence denotes As coronaviruses preferentially interact with 9-O-acetyl-N-acetylneuraminic acid (9-O-SIA) [10], this study used a similar molecular modelling approach to assess whether CLQ could also interact with this specific sialic acid.
T69 490-597 Sentence denotes A good fit between CLQ and 9-O-SIA was obtained Fig. 2(d–f), with an energy of interaction of -45 kJ.mol−1.

2_test

Id Subject Object Predicate Lexical cue
32251731-23873408-48149952 356-358 23873408 denotes 10
T46400 356-358 23873408 denotes 10