PMC:7127386 / 2556-4288 JSONTXT

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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"113","span":{"begin":1347,"end":1351},"obj":"Gene"},{"id":"114","span":{"begin":1370,"end":1374},"obj":"Gene"},{"id":"115","span":{"begin":4,"end":14},"obj":"Species"},{"id":"116","span":{"begin":58,"end":66},"obj":"Species"},{"id":"117","span":{"begin":99,"end":112},"obj":"Species"},{"id":"118","span":{"begin":230,"end":238},"obj":"Species"},{"id":"119","span":{"begin":248,"end":261},"obj":"Species"},{"id":"120","span":{"begin":287,"end":297},"obj":"Species"},{"id":"121","span":{"begin":546,"end":559},"obj":"Species"},{"id":"122","span":{"begin":659,"end":668},"obj":"Species"},{"id":"123","span":{"begin":735,"end":752},"obj":"Species"},{"id":"124","span":{"begin":830,"end":836},"obj":"Species"},{"id":"125","span":{"begin":1608,"end":1619},"obj":"Species"},{"id":"126","span":{"begin":1687,"end":1695},"obj":"Species"},{"id":"127","span":{"begin":1440,"end":1450},"obj":"Species"},{"id":"128","span":{"begin":411,"end":421},"obj":"Chemical"},{"id":"129","span":{"begin":423,"end":430},"obj":"Chemical"},{"id":"130","span":{"begin":446,"end":455},"obj":"Chemical"},{"id":"131","span":{"begin":922,"end":941},"obj":"Chemical"},{"id":"132","span":{"begin":943,"end":952},"obj":"Chemical"},{"id":"133","span":{"begin":973,"end":992},"obj":"Chemical"},{"id":"134","span":{"begin":994,"end":1015},"obj":"Chemical"},{"id":"135","span":{"begin":1020,"end":1027},"obj":"Chemical"},{"id":"136","span":{"begin":1125,"end":1135},"obj":"Chemical"},{"id":"137","span":{"begin":1174,"end":1193},"obj":"Chemical"},{"id":"138","span":{"begin":1195,"end":1210},"obj":"Chemical"},{"id":"139","span":{"begin":1212,"end":1221},"obj":"Chemical"},{"id":"140","span":{"begin":1257,"end":1265},"obj":"Chemical"},{"id":"141","span":{"begin":1376,"end":1387},"obj":"Chemical"},{"id":"142","span":{"begin":1701,"end":1720},"obj":"Disease"},{"id":"143","span":{"begin":1722,"end":1730},"obj":"Disease"}],"attributes":[{"id":"A113","pred":"tao:has_database_id","subj":"113","obj":"Gene:6622"},{"id":"A114","pred":"tao:has_database_id","subj":"114","obj":"Gene:3569"},{"id":"A115","pred":"tao:has_database_id","subj":"115","obj":"Tax:2697049"},{"id":"A116","pred":"tao:has_database_id","subj":"116","obj":"Tax:694009"},{"id":"A117","pred":"tao:has_database_id","subj":"117","obj":"Tax:11118"},{"id":"A118","pred":"tao:has_database_id","subj":"118","obj":"Tax:694009"},{"id":"A119","pred":"tao:has_database_id","subj":"119","obj":"Tax:11118"},{"id":"A120","pred":"tao:has_database_id","subj":"120","obj":"Tax:2697049"},{"id":"A121","pred":"tao:has_database_id","subj":"121","obj":"Tax:11118"},{"id":"A122","pred":"tao:has_database_id","subj":"122","obj":"Tax:2697049"},{"id":"A123","pred":"tao:has_database_id","subj":"123","obj":"Tax:2697049"},{"id":"A124","pred":"tao:has_database_id","subj":"124","obj":"Tax:9606"},{"id":"A125","pred":"tao:has_database_id","subj":"125","obj":"Tax:11118"},{"id":"A126","pred":"tao:has_database_id","subj":"126","obj":"Tax:9606"},{"id":"A127","pred":"tao:has_database_id","subj":"127","obj":"Tax:2697049"},{"id":"A128","pred":"tao:has_database_id","subj":"128","obj":"MESH:C000606551"},{"id":"A129","pred":"tao:has_database_id","subj":"129","obj":"MESH:C000606551"},{"id":"A130","pred":"tao:has_database_id","subj":"130","obj":"MESH:D000241"},{"id":"A131","pred":"tao:has_database_id","subj":"131","obj":"MESH:C558899"},{"id":"A132","pred":"tao:has_database_id","subj":"132","obj":"MESH:D012254"},{"id":"A133","pred":"tao:has_database_id","subj":"133","obj":"MESH:C558899"},{"id":"A134","pred":"tao:has_database_id","subj":"134","obj":"MESH:C023676"},{"id":"A135","pred":"tao:has_database_id","subj":"135","obj":"MESH:C086979"},{"id":"A136","pred":"tao:has_database_id","subj":"136","obj":"MESH:C000606551"},{"id":"A137","pred":"tao:has_database_id","subj":"137","obj":"MESH:C558899"},{"id":"A139","pred":"tao:has_database_id","subj":"139","obj":"MESH:D000069454"},{"id":"A140","pred":"tao:has_database_id","subj":"140","obj":"MESH:C540945"},{"id":"A141","pred":"tao:has_database_id","subj":"141","obj":"MESH:C502936"},{"id":"A142","pred":"tao:has_database_id","subj":"142","obj":"MESH:D018352"},{"id":"A143","pred":"tao:has_database_id","subj":"143","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"The SARS-CoV-2 virus shared 79.5% genetic homology to the SARS-CoV and both are descendants of bat coronaviruses within the Betacoronavirus genus (Zhou et al., 2020). Antiviral compounds previously reported to show effect against SARS-CoV or other coronaviruses may be effective against SARS-CoV-2 (Chu et al., 2004; de Wilde et al., 2014; Dyall et al., 2014; Shen et al., 2019; Cao et al., 2015). In addition, remdesivir (GS-5734), a prodrug of adenosine analog with a broad-spectrum antiviral activity against filoviruses, paramyxoviruses, and coronaviruses (Brown et al., 2019; Sheahan et al., 2017; de Wit et al., 2020), was recently confirmed to inhibit 2019-nCoV in vitro (Wang et al., 2020). According to the 7th edition of the novel coronavirus diagnosis and treatment plan issued by the National Health Commission of the People's Republic of China, options for antiviral therapy include aerosolized α-interferon, lopinavir/ritonavir, ribavirin in combination with lopinavir/ritonavir, chloroquine phosphate, or Arbidol (China National Health Commission, 2020). Ongoing clinical trials are evaluating the efficacy of remdesivir, and various HIV-protease inhibitors (lopinavir/ritonavir, ASC09/ritonavir, darunavir), reverse transcriptase inhibitor (Azvudine), anti-influenza compounds, interferon alfa-2b, or monoclonal antibody targeting PD-1 (Camrelizumab) or IL-6 (Tocilizumab) (Chinese Clinical Trial Re). We evaluated the anti-SARS-CoV-2 effect of compounds that have been under development or already approved for other clinical applications; some compounds were previously reported to inhibit coronavirus replication in vitro, and some are evaluated in clinical trials in patients with coronavirus disease (COVID-19)."}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T4","span":{"begin":1149,"end":1152},"obj":"Body_part"},{"id":"T5","span":{"begin":1328,"end":1336},"obj":"Body_part"}],"attributes":[{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma278683"},{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma62871"}],"text":"The SARS-CoV-2 virus shared 79.5% genetic homology to the SARS-CoV and both are descendants of bat coronaviruses within the Betacoronavirus genus (Zhou et al., 2020). Antiviral compounds previously reported to show effect against SARS-CoV or other coronaviruses may be effective against SARS-CoV-2 (Chu et al., 2004; de Wilde et al., 2014; Dyall et al., 2014; Shen et al., 2019; Cao et al., 2015). In addition, remdesivir (GS-5734), a prodrug of adenosine analog with a broad-spectrum antiviral activity against filoviruses, paramyxoviruses, and coronaviruses (Brown et al., 2019; Sheahan et al., 2017; de Wit et al., 2020), was recently confirmed to inhibit 2019-nCoV in vitro (Wang et al., 2020). According to the 7th edition of the novel coronavirus diagnosis and treatment plan issued by the National Health Commission of the People's Republic of China, options for antiviral therapy include aerosolized α-interferon, lopinavir/ritonavir, ribavirin in combination with lopinavir/ritonavir, chloroquine phosphate, or Arbidol (China National Health Commission, 2020). Ongoing clinical trials are evaluating the efficacy of remdesivir, and various HIV-protease inhibitors (lopinavir/ritonavir, ASC09/ritonavir, darunavir), reverse transcriptase inhibitor (Azvudine), anti-influenza compounds, interferon alfa-2b, or monoclonal antibody targeting PD-1 (Camrelizumab) or IL-6 (Tocilizumab) (Chinese Clinical Trial Re). We evaluated the anti-SARS-CoV-2 effect of compounds that have been under development or already approved for other clinical applications; some compounds were previously reported to inhibit coronavirus replication in vitro, and some are evaluated in clinical trials in patients with coronavirus disease (COVID-19)."}

    LitCovid-PD-MONDO

    {"project":"LitCovid-PD-MONDO","denotations":[{"id":"T15","span":{"begin":4,"end":12},"obj":"Disease"},{"id":"T16","span":{"begin":58,"end":66},"obj":"Disease"},{"id":"T17","span":{"begin":230,"end":238},"obj":"Disease"},{"id":"T18","span":{"begin":287,"end":295},"obj":"Disease"},{"id":"T19","span":{"begin":423,"end":425},"obj":"Disease"},{"id":"T20","span":{"begin":1273,"end":1282},"obj":"Disease"},{"id":"T21","span":{"begin":1440,"end":1448},"obj":"Disease"},{"id":"T22","span":{"begin":1722,"end":1730},"obj":"Disease"}],"attributes":[{"id":"A15","pred":"mondo_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A16","pred":"mondo_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A17","pred":"mondo_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A18","pred":"mondo_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A19","pred":"mondo_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/MONDO_0005773"},{"id":"A20","pred":"mondo_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/MONDO_0005812"},{"id":"A21","pred":"mondo_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A22","pred":"mondo_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"The SARS-CoV-2 virus shared 79.5% genetic homology to the SARS-CoV and both are descendants of bat coronaviruses within the Betacoronavirus genus (Zhou et al., 2020). Antiviral compounds previously reported to show effect against SARS-CoV or other coronaviruses may be effective against SARS-CoV-2 (Chu et al., 2004; de Wilde et al., 2014; Dyall et al., 2014; Shen et al., 2019; Cao et al., 2015). In addition, remdesivir (GS-5734), a prodrug of adenosine analog with a broad-spectrum antiviral activity against filoviruses, paramyxoviruses, and coronaviruses (Brown et al., 2019; Sheahan et al., 2017; de Wit et al., 2020), was recently confirmed to inhibit 2019-nCoV in vitro (Wang et al., 2020). According to the 7th edition of the novel coronavirus diagnosis and treatment plan issued by the National Health Commission of the People's Republic of China, options for antiviral therapy include aerosolized α-interferon, lopinavir/ritonavir, ribavirin in combination with lopinavir/ritonavir, chloroquine phosphate, or Arbidol (China National Health Commission, 2020). Ongoing clinical trials are evaluating the efficacy of remdesivir, and various HIV-protease inhibitors (lopinavir/ritonavir, ASC09/ritonavir, darunavir), reverse transcriptase inhibitor (Azvudine), anti-influenza compounds, interferon alfa-2b, or monoclonal antibody targeting PD-1 (Camrelizumab) or IL-6 (Tocilizumab) (Chinese Clinical Trial Re). We evaluated the anti-SARS-CoV-2 effect of compounds that have been under development or already approved for other clinical applications; some compounds were previously reported to inhibit coronavirus replication in vitro, and some are evaluated in clinical trials in patients with coronavirus disease (COVID-19)."}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T14","span":{"begin":15,"end":20},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T15","span":{"begin":95,"end":98},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T16","span":{"begin":433,"end":434},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T17","span":{"begin":468,"end":469},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T18","span":{"begin":495,"end":503},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"}],"text":"The SARS-CoV-2 virus shared 79.5% genetic homology to the SARS-CoV and both are descendants of bat coronaviruses within the Betacoronavirus genus (Zhou et al., 2020). Antiviral compounds previously reported to show effect against SARS-CoV or other coronaviruses may be effective against SARS-CoV-2 (Chu et al., 2004; de Wilde et al., 2014; Dyall et al., 2014; Shen et al., 2019; Cao et al., 2015). In addition, remdesivir (GS-5734), a prodrug of adenosine analog with a broad-spectrum antiviral activity against filoviruses, paramyxoviruses, and coronaviruses (Brown et al., 2019; Sheahan et al., 2017; de Wit et al., 2020), was recently confirmed to inhibit 2019-nCoV in vitro (Wang et al., 2020). According to the 7th edition of the novel coronavirus diagnosis and treatment plan issued by the National Health Commission of the People's Republic of China, options for antiviral therapy include aerosolized α-interferon, lopinavir/ritonavir, ribavirin in combination with lopinavir/ritonavir, chloroquine phosphate, or Arbidol (China National Health Commission, 2020). Ongoing clinical trials are evaluating the efficacy of remdesivir, and various HIV-protease inhibitors (lopinavir/ritonavir, ASC09/ritonavir, darunavir), reverse transcriptase inhibitor (Azvudine), anti-influenza compounds, interferon alfa-2b, or monoclonal antibody targeting PD-1 (Camrelizumab) or IL-6 (Tocilizumab) (Chinese Clinical Trial Re). We evaluated the anti-SARS-CoV-2 effect of compounds that have been under development or already approved for other clinical applications; some compounds were previously reported to inhibit coronavirus replication in vitro, and some are evaluated in clinical trials in patients with coronavirus disease (COVID-19)."}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T21","span":{"begin":411,"end":421},"obj":"Chemical"},{"id":"T22","span":{"begin":423,"end":430},"obj":"Chemical"},{"id":"T23","span":{"begin":423,"end":425},"obj":"Chemical"},{"id":"T24","span":{"begin":435,"end":442},"obj":"Chemical"},{"id":"T25","span":{"begin":446,"end":455},"obj":"Chemical"},{"id":"T26","span":{"begin":485,"end":494},"obj":"Chemical"},{"id":"T27","span":{"begin":870,"end":879},"obj":"Chemical"},{"id":"T28","span":{"begin":910,"end":920},"obj":"Chemical"},{"id":"T29","span":{"begin":922,"end":941},"obj":"Chemical"},{"id":"T30","span":{"begin":922,"end":931},"obj":"Chemical"},{"id":"T31","span":{"begin":932,"end":941},"obj":"Chemical"},{"id":"T32","span":{"begin":943,"end":952},"obj":"Chemical"},{"id":"T33","span":{"begin":973,"end":992},"obj":"Chemical"},{"id":"T34","span":{"begin":973,"end":982},"obj":"Chemical"},{"id":"T35","span":{"begin":983,"end":992},"obj":"Chemical"},{"id":"T36","span":{"begin":994,"end":1005},"obj":"Chemical"},{"id":"T37","span":{"begin":1006,"end":1015},"obj":"Chemical"},{"id":"T41","span":{"begin":1125,"end":1135},"obj":"Chemical"},{"id":"T42","span":{"begin":1149,"end":1172},"obj":"Chemical"},{"id":"T43","span":{"begin":1153,"end":1172},"obj":"Chemical"},{"id":"T45","span":{"begin":1162,"end":1172},"obj":"Chemical"},{"id":"T46","span":{"begin":1174,"end":1193},"obj":"Chemical"},{"id":"T47","span":{"begin":1174,"end":1183},"obj":"Chemical"},{"id":"T48","span":{"begin":1184,"end":1193},"obj":"Chemical"},{"id":"T49","span":{"begin":1201,"end":1210},"obj":"Chemical"},{"id":"T50","span":{"begin":1212,"end":1221},"obj":"Chemical"},{"id":"T51","span":{"begin":1224,"end":1255},"obj":"Chemical"},{"id":"T53","span":{"begin":1232,"end":1255},"obj":"Chemical"},{"id":"T54","span":{"begin":1246,"end":1255},"obj":"Chemical"},{"id":"T55","span":{"begin":1294,"end":1304},"obj":"Chemical"},{"id":"T56","span":{"begin":1347,"end":1349},"obj":"Chemical"},{"id":"T57","span":{"begin":1370,"end":1372},"obj":"Chemical"},{"id":"T59","span":{"begin":1413,"end":1415},"obj":"Chemical"}],"attributes":[{"id":"A21","pred":"chebi_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/CHEBI_145994"},{"id":"A22","pred":"chebi_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/CHEBI_145994"},{"id":"A23","pred":"chebi_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/CHEBI_73516"},{"id":"A24","pred":"chebi_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/CHEBI_50266"},{"id":"A25","pred":"chebi_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/CHEBI_16335"},{"id":"A26","pred":"chebi_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/CHEBI_22587"},{"id":"A27","pred":"chebi_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/CHEBI_22587"},{"id":"A28","pred":"chebi_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/CHEBI_52999"},{"id":"A29","pred":"chebi_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/CHEBI_145924"},{"id":"A30","pred":"chebi_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/CHEBI_31781"},{"id":"A31","pred":"chebi_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/CHEBI_45409"},{"id":"A32","pred":"chebi_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/CHEBI_63580"},{"id":"A33","pred":"chebi_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/CHEBI_145924"},{"id":"A34","pred":"chebi_id","subj":"T34","obj":"http://purl.obolibrary.org/obo/CHEBI_31781"},{"id":"A35","pred":"chebi_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/CHEBI_45409"},{"id":"A36","pred":"chebi_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/CHEBI_3638"},{"id":"A37","pred":"chebi_id","subj":"T37","obj":"http://purl.obolibrary.org/obo/CHEBI_18367"},{"id":"A38","pred":"chebi_id","subj":"T37","obj":"http://purl.obolibrary.org/obo/CHEBI_26020"},{"id":"A39","pred":"chebi_id","subj":"T37","obj":"http://purl.obolibrary.org/obo/CHEBI_35780"},{"id":"A40","pred":"chebi_id","subj":"T37","obj":"http://purl.obolibrary.org/obo/CHEBI_43474"},{"id":"A41","pred":"chebi_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/CHEBI_145994"},{"id":"A42","pred":"chebi_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/CHEBI_35660"},{"id":"A43","pred":"chebi_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/CHEBI_37670"},{"id":"A44","pred":"chebi_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/CHEBI_60258"},{"id":"A45","pred":"chebi_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/CHEBI_35222"},{"id":"A46","pred":"chebi_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/CHEBI_145924"},{"id":"A47","pred":"chebi_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/CHEBI_31781"},{"id":"A48","pred":"chebi_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/CHEBI_45409"},{"id":"A49","pred":"chebi_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/CHEBI_45409"},{"id":"A50","pred":"chebi_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/CHEBI_367163"},{"id":"A51","pred":"chebi_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/CHEBI_53756"},{"id":"A52","pred":"chebi_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/CHEBI_59897"},{"id":"A53","pred":"chebi_id","subj":"T53","obj":"http://purl.obolibrary.org/obo/CHEBI_37416"},{"id":"A54","pred":"chebi_id","subj":"T54","obj":"http://purl.obolibrary.org/obo/CHEBI_35222"},{"id":"A55","pred":"chebi_id","subj":"T55","obj":"http://purl.obolibrary.org/obo/CHEBI_52999"},{"id":"A56","pred":"chebi_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/CHEBI_74756"},{"id":"A57","pred":"chebi_id","subj":"T57","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A58","pred":"chebi_id","subj":"T57","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A59","pred":"chebi_id","subj":"T59","obj":"http://purl.obolibrary.org/obo/CHEBI_49882"}],"text":"The SARS-CoV-2 virus shared 79.5% genetic homology to the SARS-CoV and both are descendants of bat coronaviruses within the Betacoronavirus genus (Zhou et al., 2020). Antiviral compounds previously reported to show effect against SARS-CoV or other coronaviruses may be effective against SARS-CoV-2 (Chu et al., 2004; de Wilde et al., 2014; Dyall et al., 2014; Shen et al., 2019; Cao et al., 2015). In addition, remdesivir (GS-5734), a prodrug of adenosine analog with a broad-spectrum antiviral activity against filoviruses, paramyxoviruses, and coronaviruses (Brown et al., 2019; Sheahan et al., 2017; de Wit et al., 2020), was recently confirmed to inhibit 2019-nCoV in vitro (Wang et al., 2020). According to the 7th edition of the novel coronavirus diagnosis and treatment plan issued by the National Health Commission of the People's Republic of China, options for antiviral therapy include aerosolized α-interferon, lopinavir/ritonavir, ribavirin in combination with lopinavir/ritonavir, chloroquine phosphate, or Arbidol (China National Health Commission, 2020). Ongoing clinical trials are evaluating the efficacy of remdesivir, and various HIV-protease inhibitors (lopinavir/ritonavir, ASC09/ritonavir, darunavir), reverse transcriptase inhibitor (Azvudine), anti-influenza compounds, interferon alfa-2b, or monoclonal antibody targeting PD-1 (Camrelizumab) or IL-6 (Tocilizumab) (Chinese Clinical Trial Re). We evaluated the anti-SARS-CoV-2 effect of compounds that have been under development or already approved for other clinical applications; some compounds were previously reported to inhibit coronavirus replication in vitro, and some are evaluated in clinical trials in patients with coronavirus disease (COVID-19)."}

    LitCovid-PD-GO-BP

    {"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":1232,"end":1245},"obj":"http://purl.obolibrary.org/obo/GO_0003968"},{"id":"T2","span":{"begin":1232,"end":1245},"obj":"http://purl.obolibrary.org/obo/GO_0003899"}],"text":"The SARS-CoV-2 virus shared 79.5% genetic homology to the SARS-CoV and both are descendants of bat coronaviruses within the Betacoronavirus genus (Zhou et al., 2020). Antiviral compounds previously reported to show effect against SARS-CoV or other coronaviruses may be effective against SARS-CoV-2 (Chu et al., 2004; de Wilde et al., 2014; Dyall et al., 2014; Shen et al., 2019; Cao et al., 2015). In addition, remdesivir (GS-5734), a prodrug of adenosine analog with a broad-spectrum antiviral activity against filoviruses, paramyxoviruses, and coronaviruses (Brown et al., 2019; Sheahan et al., 2017; de Wit et al., 2020), was recently confirmed to inhibit 2019-nCoV in vitro (Wang et al., 2020). According to the 7th edition of the novel coronavirus diagnosis and treatment plan issued by the National Health Commission of the People's Republic of China, options for antiviral therapy include aerosolized α-interferon, lopinavir/ritonavir, ribavirin in combination with lopinavir/ritonavir, chloroquine phosphate, or Arbidol (China National Health Commission, 2020). Ongoing clinical trials are evaluating the efficacy of remdesivir, and various HIV-protease inhibitors (lopinavir/ritonavir, ASC09/ritonavir, darunavir), reverse transcriptase inhibitor (Azvudine), anti-influenza compounds, interferon alfa-2b, or monoclonal antibody targeting PD-1 (Camrelizumab) or IL-6 (Tocilizumab) (Chinese Clinical Trial Re). We evaluated the anti-SARS-CoV-2 effect of compounds that have been under development or already approved for other clinical applications; some compounds were previously reported to inhibit coronavirus replication in vitro, and some are evaluated in clinical trials in patients with coronavirus disease (COVID-19)."}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T19","span":{"begin":0,"end":166},"obj":"Sentence"},{"id":"T20","span":{"begin":167,"end":397},"obj":"Sentence"},{"id":"T21","span":{"begin":398,"end":698},"obj":"Sentence"},{"id":"T22","span":{"begin":699,"end":1069},"obj":"Sentence"},{"id":"T23","span":{"begin":1070,"end":1417},"obj":"Sentence"},{"id":"T24","span":{"begin":1418,"end":1732},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The SARS-CoV-2 virus shared 79.5% genetic homology to the SARS-CoV and both are descendants of bat coronaviruses within the Betacoronavirus genus (Zhou et al., 2020). Antiviral compounds previously reported to show effect against SARS-CoV or other coronaviruses may be effective against SARS-CoV-2 (Chu et al., 2004; de Wilde et al., 2014; Dyall et al., 2014; Shen et al., 2019; Cao et al., 2015). In addition, remdesivir (GS-5734), a prodrug of adenosine analog with a broad-spectrum antiviral activity against filoviruses, paramyxoviruses, and coronaviruses (Brown et al., 2019; Sheahan et al., 2017; de Wit et al., 2020), was recently confirmed to inhibit 2019-nCoV in vitro (Wang et al., 2020). According to the 7th edition of the novel coronavirus diagnosis and treatment plan issued by the National Health Commission of the People's Republic of China, options for antiviral therapy include aerosolized α-interferon, lopinavir/ritonavir, ribavirin in combination with lopinavir/ritonavir, chloroquine phosphate, or Arbidol (China National Health Commission, 2020). Ongoing clinical trials are evaluating the efficacy of remdesivir, and various HIV-protease inhibitors (lopinavir/ritonavir, ASC09/ritonavir, darunavir), reverse transcriptase inhibitor (Azvudine), anti-influenza compounds, interferon alfa-2b, or monoclonal antibody targeting PD-1 (Camrelizumab) or IL-6 (Tocilizumab) (Chinese Clinical Trial Re). We evaluated the anti-SARS-CoV-2 effect of compounds that have been under development or already approved for other clinical applications; some compounds were previously reported to inhibit coronavirus replication in vitro, and some are evaluated in clinical trials in patients with coronavirus disease (COVID-19)."}

    LitCovid-PMC-OGER-BB

    {"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T62","span":{"begin":4,"end":14},"obj":"SP_7"},{"id":"T63","span":{"begin":15,"end":20},"obj":"NCBITaxon:10239"},{"id":"T64","span":{"begin":34,"end":41},"obj":"SO:0000704"},{"id":"T65","span":{"begin":42,"end":50},"obj":"SO:0000853"},{"id":"T66","span":{"begin":58,"end":66},"obj":"SP_10"},{"id":"T67","span":{"begin":95,"end":98},"obj":"SP_2"},{"id":"T68","span":{"begin":99,"end":112},"obj":"NCBITaxon:11118"},{"id":"T69","span":{"begin":124,"end":139},"obj":"SP_8;NCBITaxon:694002"},{"id":"T70","span":{"begin":177,"end":186},"obj":"CHEBI:36357;CHEBI:36357"},{"id":"T71","span":{"begin":230,"end":238},"obj":"SP_10"},{"id":"T72","span":{"begin":248,"end":261},"obj":"NCBITaxon:11118"},{"id":"T73","span":{"begin":287,"end":297},"obj":"SP_7"},{"id":"T74","span":{"begin":411,"end":421},"obj":"DG_28"},{"id":"T75","span":{"begin":423,"end":430},"obj":"DG_28"},{"id":"T76","span":{"begin":435,"end":442},"obj":"CHEBI:50266;CHEBI:50266"},{"id":"T77","span":{"begin":446,"end":455},"obj":"CHEBI:22260;CHEBI:22260"},{"id":"T78","span":{"begin":512,"end":523},"obj":"NCBITaxon:4894"},{"id":"T79","span":{"begin":525,"end":540},"obj":"NCBITaxon:7656"},{"id":"T80","span":{"begin":546,"end":559},"obj":"NCBITaxon:11118"},{"id":"T81","span":{"begin":659,"end":668},"obj":"SP_7"},{"id":"T82","span":{"begin":741,"end":752},"obj":"NCBITaxon:11118"},{"id":"T83","span":{"begin":922,"end":931},"obj":"DG_23"},{"id":"T84","span":{"begin":932,"end":941},"obj":"DG_30"},{"id":"T85","span":{"begin":943,"end":952},"obj":"DG_29"},{"id":"T86","span":{"begin":973,"end":982},"obj":"DG_23"},{"id":"T87","span":{"begin":983,"end":992},"obj":"DG_30"},{"id":"T88","span":{"begin":994,"end":1005},"obj":"DG_10;CHEBI:3638;CHEBI:3638"},{"id":"T89","span":{"begin":1020,"end":1027},"obj":"DG_49"},{"id":"T90","span":{"begin":1125,"end":1135},"obj":"DG_28"},{"id":"T91","span":{"begin":1162,"end":1172},"obj":"CHEBI:35660;CHEBI:35660"},{"id":"T92","span":{"begin":1174,"end":1183},"obj":"DG_23"},{"id":"T93","span":{"begin":1184,"end":1193},"obj":"DG_30"},{"id":"T94","span":{"begin":1201,"end":1210},"obj":"DG_30"},{"id":"T95","span":{"begin":1212,"end":1221},"obj":"DG_13"},{"id":"T96","span":{"begin":1246,"end":1255},"obj":"CHEBI:35222;CHEBI:35222"},{"id":"T97","span":{"begin":1283,"end":1292},"obj":"CHEBI:36357;CHEBI:36357"},{"id":"T98","span":{"begin":1328,"end":1336},"obj":"GO:0042571"},{"id":"T99","span":{"begin":1347,"end":1351},"obj":"PR:000001919"},{"id":"T100","span":{"begin":1370,"end":1374},"obj":"PR:000001393"},{"id":"T101","span":{"begin":1376,"end":1387},"obj":"DG_35"},{"id":"T102","span":{"begin":1440,"end":1450},"obj":"SP_7"},{"id":"T103","span":{"begin":1461,"end":1470},"obj":"CHEBI:36357;CHEBI:36357"},{"id":"T104","span":{"begin":1562,"end":1571},"obj":"CHEBI:36357;CHEBI:36357"},{"id":"T105","span":{"begin":1608,"end":1619},"obj":"NCBITaxon:11118"},{"id":"T106","span":{"begin":1620,"end":1631},"obj":"GO:0006260"},{"id":"T107","span":{"begin":1701,"end":1712},"obj":"NCBITaxon:11118"},{"id":"T108","span":{"begin":1722,"end":1730},"obj":"SP_7"},{"id":"T52826","span":{"begin":7,"end":11},"obj":"CL_6"},{"id":"T12546","span":{"begin":44,"end":49},"obj":"NCBITaxon:10239"},{"id":"T43018","span":{"begin":113,"end":117},"obj":"CL_6"},{"id":"T73353","span":{"begin":182,"end":191},"obj":"CHEBI:17634;CHEBI:17634"},{"id":"T71214","span":{"begin":202,"end":217},"obj":"CHEBI:50144;CHEBI:50144"},{"id":"T87029","span":{"begin":239,"end":249},"obj":"CHEBI:17334;CHEBI:17334"},{"id":"T21525","span":{"begin":250,"end":262},"obj":"CHEBI:17076;CHEBI:17076"},{"id":"T2533","span":{"begin":274,"end":279},"obj":"CHEBI:46756;CHEBI:46756"},{"id":"T79534","span":{"begin":373,"end":377},"obj":"CHEBI:51231;CHEBI:51231"},{"id":"T15231","span":{"begin":385,"end":395},"obj":"DG_28"},{"id":"T67564","span":{"begin":404,"end":414},"obj":"CHEBI:119915;CHEBI:119915;DG_17;NCBITaxon:31032"},{"id":"T87782","span":{"begin":436,"end":445},"obj":"CHEBI:50694;CHEBI:50694"},{"id":"T16835","span":{"begin":453,"end":474},"obj":"CHEBI:63599;CHEBI:63599"},{"id":"T9266","span":{"begin":482,"end":491},"obj":"CHEBI:3213;CHEBI:3213;NCBITaxon:10442"},{"id":"T56626","span":{"begin":499,"end":527},"obj":"CHEBI:3649;CHEBI:3649"},{"id":"T4831","span":{"begin":534,"end":545},"obj":"CHEBI:82721;CHEBI:82721"},{"id":"T84456","span":{"begin":546,"end":559},"obj":"CHEBI:36807;CHEBI:36807"},{"id":"T39900","span":{"begin":592,"end":600},"obj":"CHEBI:31781;CHEBI:31781;DG_23"},{"id":"T49983","span":{"begin":608,"end":617},"obj":"CHEBI:45409;CHEBI:45409;DG_30"},{"id":"T31126","span":{"begin":627,"end":632},"obj":"CHEBI:15377;CHEBI:15377"},{"id":"T62767","span":{"begin":639,"end":646},"obj":"CHEBI:4781;CHEBI:4781"},{"id":"T11480","span":{"begin":647,"end":662},"obj":"CHEBI:50488;CHEBI:50488"},{"id":"T91872","span":{"begin":670,"end":681},"obj":"DG_19"},{"id":"T98412","span":{"begin":682,"end":695},"obj":"CHEBI:36807;CHEBI:36807"},{"id":"T83890","span":{"begin":703,"end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SARS-CoV-2 virus shared 79.5% genetic homology to the SARS-CoV and both are descendants of bat coronaviruses within the Betacoronavirus genus (Zhou et al., 2020). Antiviral compounds previously reported to show effect against SARS-CoV or other coronaviruses may be effective against SARS-CoV-2 (Chu et al., 2004; de Wilde et al., 2014; Dyall et al., 2014; Shen et al., 2019; Cao et al., 2015). In addition, remdesivir (GS-5734), a prodrug of adenosine analog with a broad-spectrum antiviral activity against filoviruses, paramyxoviruses, and coronaviruses (Brown et al., 2019; Sheahan et al., 2017; de Wit et al., 2020), was recently confirmed to inhibit 2019-nCoV in vitro (Wang et al., 2020). According to the 7th edition of the novel coronavirus diagnosis and treatment plan issued by the National Health Commission of the People's Republic of China, options for antiviral therapy include aerosolized α-interferon, lopinavir/ritonavir, ribavirin in combination with lopinavir/ritonavir, chloroquine phosphate, or Arbidol (China National Health Commission, 2020). Ongoing clinical trials are evaluating the efficacy of remdesivir, and various HIV-protease inhibitors (lopinavir/ritonavir, ASC09/ritonavir, darunavir), reverse transcriptase inhibitor (Azvudine), anti-influenza compounds, interferon alfa-2b, or monoclonal antibody targeting PD-1 (Camrelizumab) or IL-6 (Tocilizumab) (Chinese Clinical Trial Re). We evaluated the anti-SARS-CoV-2 effect of compounds that have been under development or already approved for other clinical applications; some compounds were previously reported to inhibit coronavirus replication in vitro, and some are evaluated in clinical trials in patients with coronavirus disease (COVID-19)."}