PMC:7127067 / 14370-15422
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T45 | 831-835 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T46 | 901-911 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T120 | 0-8 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T121 | 153-161 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T122 | 284-292 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T123 | 324-332 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T124 | 324-328 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T125 | 413-421 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T126 | 519-527 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T127 | 738-746 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T128 | 747-757 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T129 | 980-988 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T130 | 980-984 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T111 | 78-84 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
| T112 | 89-92 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T113 | 168-169 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T114 | 366-367 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T115 | 401-407 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
| T116 | 449-452 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
| T117 | 534-537 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
| T118 | 565-566 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T119 | 617-618 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T120 | 632-638 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T121 | 671-677 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T122 | 720-726 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T123 | 780-787 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T124 | 793-794 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T125 | 831-835 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T126 | 848-849 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T127 | 871-874 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
| T128 | 1012-1019 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T11 | 858-867 | Chemical | denotes | indicator | http://purl.obolibrary.org/obo/CHEBI_47867 |
| T12 | 901-911 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T13 | 901-906 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T14 | 907-911 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T102 | 0-148 | Sentence | denotes | COVID-19 represents the seventh member of the coronavirus family that infects humans and has been classified under the orthocoronavirinae subfamily. |
| T103 | 149-214 | Sentence | denotes | The COVID-19 forms a clade within the subgenus sarbecovirus [25]. |
| T104 | 215-408 | Sentence | denotes | Based on the genetic sequence identity and the phylogenetic reports, COVID-19 is sufficiently different from SARS-CoV and it can thus be considered as a new betacoronavirus that infects humans. |
| T105 | 409-474 | Sentence | denotes | The COVID-19 most likely developed from bat origin coronaviruses. |
| T106 | 475-763 | Sentence | denotes | Another piece of evidence that supports the COVID-19 is of bat origin is the existence of a high degree of homology of the ACE2 receptor from a diversity of animal species, thus implicating these animal species as possible intermediate hosts or animal models for COVID-19 infections [20]. |
| T107 | 764-887 | Sentence | denotes | Moreover, these viruses have a single intact open reading frame on gene 8, which is a further indicator of bat-origin CoVs. |
| T108 | 888-1052 | Sentence | denotes | However, the amino acid sequence of the tentative receptor-binding domain resembles that of SARS-CoV, indicating that these viruses might use the same receptor [5]. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 522 | 598-602 | Gene | denotes | ACE2 | Gene:59272 |
| 523 | 46-57 | Species | denotes | coronavirus | Tax:11118 |
| 524 | 78-84 | Species | denotes | humans | Tax:9606 |
| 525 | 324-332 | Species | denotes | SARS-CoV | Tax:694009 |
| 526 | 372-387 | Species | denotes | betacoronavirus | Tax:694002 |
| 527 | 401-407 | Species | denotes | humans | Tax:9606 |
| 528 | 460-473 | Species | denotes | coronaviruses | Tax:11118 |
| 529 | 882-886 | Species | denotes | CoVs | Tax:11118 |
| 530 | 980-988 | Species | denotes | SARS-CoV | Tax:694009 |
| 531 | 0-8 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 532 | 153-161 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 533 | 284-292 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 534 | 413-421 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 535 | 519-527 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 536 | 738-746 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 537 | 747-757 | Disease | denotes | infections | MESH:D007239 |