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PMC:7126544 / 41709-42360 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T88 394-398 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T89 437-460 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662
T90 600-623 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T46 394-398 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T47 437-460 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T48 443-460 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T49 600-623 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T50 606-623 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T334 51-60 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T335 94-102 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T336 94-98 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T337 174-193 Disease denotes respiratory disease http://purl.obolibrary.org/obo/MONDO_0005087
T338 274-285 Disease denotes common cold http://purl.obolibrary.org/obo/MONDO_0005709
T339 323-336 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T340 400-408 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T341 400-404 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T342 538-546 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T343 538-542 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T344 563-571 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T345 563-567 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T346 641-650 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T337 157-163 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T338 437-460 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T339 471-472 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T340 504-509 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T341 600-623 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T26 29-41 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T117 316-333 Phenotype denotes severe infections http://purl.obolibrary.org/obo/HP_0032169
T118 641-650 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T347 0-105 Sentence denotes Current understanding of the pathogenesis of HCoVs infection is still limited, especially for SARS-CoV-2.
T348 106-194 Sentence denotes Before 2019, there were six CoVs that could infect humans and cause respiratory disease.
T349 195-380 Sentence denotes HCoV-229E, HCoV-OC43, HCoV-NL63 and HCoV-HKU1 are sometimes attributed to the “common cold”, but in rare cases can cause severe infections in infants, young children and elderly people.
T350 381-517 Sentence denotes On the other hand, SARS-CoV and MERS-CoV can infect the lower respiratory tract and cause a severe respiratory syndrome in human [3,12].
T351 518-651 Sentence denotes The new coronavirus SARS-CoV-2 is similar to SARS-CoV and MERS-CoV and can infect lower respiratory tract and cause severe pneumonia.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1092 94-104 Species denotes SARS-CoV-2 Tax:2697049
1093 134-138 Species denotes CoVs Tax:11118
1094 157-163 Species denotes humans Tax:9606
1095 195-204 Species denotes HCoV-229E Tax:11137
1096 206-215 Species denotes HCoV-OC43 Tax:31631
1097 217-226 Species denotes HCoV-NL63 Tax:277944
1098 231-240 Species denotes HCoV-HKU1 Tax:290028
1099 337-344 Species denotes infants Tax:9606
1100 352-360 Species denotes children Tax:9606
1101 373-379 Species denotes people Tax:9606
1102 400-408 Species denotes SARS-CoV Tax:694009
1103 413-421 Species denotes MERS-CoV Tax:1335626
1104 504-509 Species denotes human Tax:9606
1105 522-537 Species denotes new coronavirus Tax:2697049
1106 538-548 Species denotes SARS-CoV-2 Tax:2697049
1107 563-571 Species denotes SARS-CoV Tax:694009
1108 576-584 Species denotes MERS-CoV Tax:1335626
1109 443-454 Species denotes respiratory Tax:12814
1110 480-491 Species denotes respiratory Tax:12814
1111 606-617 Species denotes respiratory Tax:12814
1112 45-60 Disease denotes HCoVs infection MESH:D007239
1113 174-193 Disease denotes respiratory disease MESH:D012140
1114 323-333 Disease denotes infections MESH:D007239
1115 641-650 Disease denotes pneumonia MESH:D011014

2_test

Id Subject Object Predicate Lexical cue
32143990-27012512-55637409 511-512 27012512 denotes 3
32143990-25720466-55637410 513-515 25720466 denotes 12