PMC:7126544 / 39709-41675
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T85 | 1047-1053 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T86 | 1122-1130 | Body_part | denotes | alveolar | http://purl.org/sig/ont/fma/fma264783 |
| T87 | 1160-1165 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T44 | 1047-1053 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T45 | 1160-1165 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T324 | 24-32 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T325 | 24-28 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T326 | 185-193 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T327 | 185-189 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T328 | 247-255 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T329 | 247-251 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T330 | 318-326 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T331 | 318-322 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T332 | 1880-1889 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T326 | 121-126 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T327 | 808-811 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T328 | 945-950 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T329 | 1101-1105 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T330 | 1160-1165 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T331 | 1180-1187 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T332 | 1221-1222 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T333 | 1231-1232 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T334 | 1326-1331 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T335 | 1496-1500 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T336 | 1927-1928 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T68 | 258-270 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T69 | 266-270 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T70 | 329-341 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T71 | 337-341 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T72 | 932-944 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T73 | 940-944 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T74 | 1088-1100 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T75 | 1096-1100 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T76 | 1442-1455 | Chemical | denotes | nucleic acids | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T77 | 1450-1455 | Chemical | denotes | acids | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T78 | 1472-1480 | Chemical | denotes | reagents | http://purl.obolibrary.org/obo/CHEBI_33893 |
| T79 | 1589-1597 | Chemical | denotes | reagents | http://purl.obolibrary.org/obo/CHEBI_33893 |
| T80 | 1798-1801 | Chemical | denotes | NHC | http://purl.obolibrary.org/obo/CHEBI_51369 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T116 | 1880-1889 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T334 | 0-82 | Sentence | denotes | 8 The effectiveness of SARS-CoV-2 rapid diagnosis in preventing spread of disease |
| T335 | 83-205 | Sentence | denotes | Several rapid and sensitive detection tests have been developed for the prevention and control of the SARS-CoV-2 outbreak. |
| T336 | 206-449 | Sentence | denotes | At present, seven products including the SARS-CoV-2 nucleic acid detection kit (fluorescent PCR method) and the SARS-CoV-2 nucleic acid sequencing system have been approved on an emergency basis by the National Medical Products Administration. |
| T337 | 450-546 | Sentence | denotes | Biological product companies have expanded production of detection kits for the new coronavirus. |
| T338 | 547-760 | Sentence | denotes | The use of detection kits can accelerate accurate diagnosis of patients, help to determine quarantine and isolation requirements, assist in determining the treatment of patients and save limited medical resources. |
| T339 | 761-860 | Sentence | denotes | However, the rapidity of spread of the disease has led to an insufficient supply of detection kits. |
| T340 | 861-1144 | Sentence | denotes | It is worth noting that there have been confirmed patients whose viral nucleic acid tests are negative multiple times in the early stages, and there have also been confirmed cases whose throat swabs were negative for the viral nucleic acid test but positive in alveolar lavage fluid. |
| T341 | 1145-1289 | Sentence | denotes | Correlation of Chest CT and RT-PCR testing of 1014 cases showed that CT had a 88% had a positive CT scan but only 59% had positive RT-PCR. [86]. |
| T342 | 1290-1386 | Sentence | denotes | The poor sensitivity of the current tests makes diagnosis and epidemic control more challenging. |
| T343 | 1387-1509 | Sentence | denotes | Sampling techniques, extraction and detection of viral nucleic acids, and diagnostic reagents may affect the test results. |
| T344 | 1510-1756 | Sentence | denotes | More attention should be paid to the sensitivity and specificity of diagnostic reagents, and diagnostic decisions should rely on comprehensive judgment based on the clinical manifestations, laboratory results and imaging examinations of patients. |
| T345 | 1757-1966 | Sentence | denotes | According to the latest guideline of the NHC [82], if the suspected cases in Hubei Province have imaging characteristic of pneumonia, the CT image results can be used as a basis for “clinical diagnosis cases”. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 1047 | 24-34 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1054 | 185-195 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1055 | 247-257 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1056 | 318-328 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 1057 | 530-545 | Species | denotes | new coronavirus | Tax:2697049 |
| 1058 | 610-618 | Species | denotes | patients | Tax:9606 |
| 1059 | 716-724 | Species | denotes | patients | Tax:9606 |
| 1063 | 911-919 | Species | denotes | patients | Tax:9606 |
| 1064 | 1747-1755 | Species | denotes | patients | Tax:9606 |
| 1065 | 1880-1889 | Disease | denotes | pneumonia | MESH:D011014 |