PMC:7126544 / 29030-33578
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T46 | 329-333 | Body_part | denotes | nose | http://purl.org/sig/ont/fma/fma46472 |
| T47 | 340-346 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T48 | 907-911 | Body_part | denotes | hand | http://purl.org/sig/ont/fma/fma9712 |
| T49 | 1326-1332 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
| T50 | 2230-2236 | Body_part | denotes | muscle | http://purl.org/sig/ont/fma/fma32558 |
| T51 | 2286-2292 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T52 | 2316-2321 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T53 | 2458-2463 | Body_part | denotes | organ | http://purl.org/sig/ont/fma/fma67498 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T22 | 329-333 | Body_part | denotes | nose | http://purl.obolibrary.org/obo/UBERON_0000004 |
| T23 | 340-346 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T24 | 907-911 | Body_part | denotes | hand | http://purl.obolibrary.org/obo/UBERON_0002398 |
| T25 | 1326-1332 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
| T26 | 2286-2292 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T27 | 2316-2321 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T28 | 2458-2463 | Body_part | denotes | organ | http://purl.obolibrary.org/obo/UBERON_0000062 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T234 | 220-228 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T235 | 323-333 | Disease | denotes | runny nose | http://purl.obolibrary.org/obo/MONDO_0003014 |
| T236 | 335-346 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T237 | 352-360 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T238 | 420-429 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T239 | 452-461 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T240 | 472-481 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T241 | 565-574 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T242 | 618-653 | Disease | denotes | acute respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T243 | 624-653 | Disease | denotes | respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0009971 |
| T244 | 655-659 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T245 | 676-694 | Disease | denotes | metabolic acidosis | http://purl.obolibrary.org/obo/MONDO_0000440 |
| T246 | 686-694 | Disease | denotes | acidosis | http://purl.obolibrary.org/obo/MONDO_0006022 |
| T247 | 927-935 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T248 | 1085-1093 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T249 | 1371-1379 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T250 | 1458-1469 | Disease | denotes | lymphopenia | http://purl.obolibrary.org/obo/MONDO_0003783 |
| T251 | 1596-1600 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T252 | 1652-1656 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T253 | 1712-1718 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T254 | 1924-1932 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T255 | 1924-1928 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T256 | 1935-1944 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T257 | 2281-2292 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T258 | 2337-2345 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T259 | 2505-2509 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T260 | 2542-2548 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T261 | 2575-2581 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T262 | 2648-2657 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T263 | 2879-2887 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T264 | 2879-2883 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T265 | 2890-2899 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T266 | 3118-3122 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T267 | 3189-3193 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T268 | 3195-3205 | Disease | denotes | arrhythmia | http://purl.obolibrary.org/obo/MONDO_0007263 |
| T269 | 3849-3857 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T270 | 4175-4184 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T271 | 4194-4198 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T272 | 4374-4382 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T273 | 4374-4378 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T274 | 4383-4392 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T240 | 174-175 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T241 | 268-269 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T242 | 329-333 | http://www.ebi.ac.uk/efo/EFO_0000828 | denotes | nose |
| T243 | 386-387 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T244 | 998-1000 | http://purl.obolibrary.org/obo/CLO_0053794 | denotes | 41 |
| T245 | 1140-1142 | http://purl.obolibrary.org/obo/CLO_0053794 | denotes | 41 |
| T246 | 1402-1404 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T247 | 1442-1444 | http://purl.obolibrary.org/obo/CLO_0053794 | denotes | 41 |
| T248 | 1622-1623 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T249 | 2025-2026 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T250 | 2230-2236 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
| T251 | 2230-2236 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
| T252 | 2230-2236 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
| T253 | 2230-2236 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
| T254 | 2244-2246 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T255 | 2316-2321 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T256 | 2458-2463 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organ |
| T257 | 2699-2701 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T258 | 3291-3293 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 36 |
| T259 | 3557-3563 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | airway |
| T260 | 3713-3716 | http://purl.obolibrary.org/obo/CLO_0001415 | denotes | 552 |
| T261 | 4327-4328 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T262 | 4338-4340 | http://purl.obolibrary.org/obo/CLO_0053794 | denotes | 41 |
| T263 | 4487-4495 | http://purl.obolibrary.org/obo/CLO_0001046 | denotes | 11 and 6 |
| T264 | 4518-4519 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T43 | 74-77 | Chemical | denotes | NHC | http://purl.obolibrary.org/obo/CHEBI_51369 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T20 | 507-516 | http://purl.obolibrary.org/obo/GO_0007585 | denotes | breathing |
| T21 | 696-707 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | coagulation |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T28 | 237-242 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T29 | 244-251 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T30 | 257-266 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
| T31 | 305-321 | Phenotype | denotes | nasal congestion | http://purl.obolibrary.org/obo/HP_0001742 |
| T32 | 323-333 | Phenotype | denotes | runny nose | http://purl.obolibrary.org/obo/HP_0031417 |
| T33 | 335-346 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
| T34 | 352-360 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T35 | 392-397 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T36 | 404-411 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T37 | 420-429 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T38 | 472-481 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T39 | 483-502 | Phenotype | denotes | shortness of breath | http://purl.obolibrary.org/obo/HP_0002098 |
| T40 | 507-529 | Phenotype | denotes | breathing difficulties | http://purl.obolibrary.org/obo/HP_0002098 |
| T41 | 624-644 | Phenotype | denotes | respiratory distress | http://purl.obolibrary.org/obo/HP_0002098 |
| T42 | 669-674 | Phenotype | denotes | shock | http://purl.obolibrary.org/obo/HP_0031273 |
| T43 | 676-694 | Phenotype | denotes | metabolic acidosis | http://purl.obolibrary.org/obo/HP_0001942 |
| T44 | 837-852 | Phenotype | denotes | low-grade fever | http://purl.obolibrary.org/obo/HP_0011134 |
| T45 | 872-877 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T46 | 1244-1249 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T47 | 1257-1262 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T48 | 1274-1281 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
| T49 | 1285-1292 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T50 | 1345-1353 | Phenotype | denotes | headache | http://purl.obolibrary.org/obo/HP_0002315 |
| T51 | 1355-1365 | Phenotype | denotes | hemoptysis | http://purl.obolibrary.org/obo/HP_0002105 |
| T52 | 1371-1379 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T53 | 1381-1388 | Phenotype | denotes | Dyspnea | http://purl.obolibrary.org/obo/HP_0002094 |
| T54 | 1458-1469 | Phenotype | denotes | lymphopenia | http://purl.obolibrary.org/obo/HP_0001888 |
| T55 | 1555-1574 | Phenotype | denotes | shortness of breath | http://purl.obolibrary.org/obo/HP_0002098 |
| T56 | 1935-1944 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T57 | 2177-2182 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T58 | 2190-2195 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T59 | 2203-2222 | Phenotype | denotes | shortness of breath | http://purl.obolibrary.org/obo/HP_0002098 |
| T60 | 2230-2242 | Phenotype | denotes | muscle aches | http://purl.obolibrary.org/obo/HP_0003326 |
| T61 | 2266-2274 | Phenotype | denotes | headache | http://purl.obolibrary.org/obo/HP_0002315 |
| T62 | 2281-2292 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
| T63 | 2299-2309 | Phenotype | denotes | rhinorrhea | http://purl.obolibrary.org/obo/HP_0031417 |
| T64 | 2316-2326 | Phenotype | denotes | chest pain | http://purl.obolibrary.org/obo/HP_0100749 |
| T65 | 2337-2345 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T66 | 2603-2608 | Phenotype | denotes | shock | http://purl.obolibrary.org/obo/HP_0031273 |
| T67 | 2648-2657 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T68 | 2890-2899 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T69 | 2926-2931 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T70 | 2941-2948 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T71 | 2958-2967 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
| T72 | 2977-2984 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
| T73 | 2998-3005 | Phenotype | denotes | dyspnea | http://purl.obolibrary.org/obo/HP_0002094 |
| T74 | 3053-3060 | Phenotype | denotes | dyspnea | http://purl.obolibrary.org/obo/HP_0002094 |
| T75 | 3195-3205 | Phenotype | denotes | arrhythmia | http://purl.obolibrary.org/obo/HP_0011675 |
| T76 | 3211-3216 | Phenotype | denotes | shock | http://purl.obolibrary.org/obo/HP_0031273 |
| T77 | 3497-3502 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T78 | 3582-3587 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T79 | 3595-3602 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
| T80 | 3614-3622 | Phenotype | denotes | headache | http://purl.obolibrary.org/obo/HP_0002315 |
| T81 | 3808-3813 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T82 | 3826-3831 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T83 | 3849-3857 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T84 | 3869-3877 | Phenotype | denotes | vomiting | http://purl.obolibrary.org/obo/HP_0002013 |
| T85 | 3954-3959 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T86 | 3996-4001 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T87 | 4175-4184 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T88 | 4210-4215 | Phenotype | denotes | shock | http://purl.obolibrary.org/obo/HP_0031273 |
| T89 | 4383-4392 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T241 | 0-28 | Sentence | denotes | 6.1 Clinical manifestations |
| T242 | 29-200 | Sentence | denotes | According to the guidelines published by the NHC and based on current epidemiological studies, the incubation period is typically 3–7 days, with a maximum of 14 days [82]. |
| T243 | 201-267 | Sentence | denotes | Common symptoms of COVID-19 include fever, fatigue, and dry cough. |
| T244 | 268-361 | Sentence | denotes | A few patients have symptoms such as nasal congestion, runny nose, sore throat, and diarrhea. |
| T245 | 362-430 | Sentence | denotes | Some patients only have a low fever, mild fatigue, and no pneumonia. |
| T246 | 431-575 | Sentence | denotes | In severe cases, the infection can cause pneumonia, shortness of breath and breathing difficulties occurring more than one week after infection. |
| T247 | 576-736 | Sentence | denotes | Critical patients may progress rapidly to acute respiratory distress syndrome (ARDS), septic shock, metabolic acidosis, coagulation dysfunction, and even death. |
| T248 | 737-878 | Sentence | denotes | It is worth noting that during the course of severe and critical patients, there can be moderate to low-grade fever or even no obvious fever. |
| T249 | 879-941 | Sentence | denotes | Huang et al. provided first-hand data regarding COVID-19 [26]. |
| T250 | 942-1113 | Sentence | denotes | Their study reported the clinical features of the first 41 patients admitted to the designated hospital in Wuhan who were laboratory-confirmed COVID-19 by January 2, 2020. |
| T251 | 1114-1198 | Sentence | denotes | Twenty-seven (66%) of the 41 patients had been exposed to the Huanan seafood market. |
| T252 | 1199-1299 | Sentence | denotes | Common symptoms at the onset of illness were fever (98%), cough (76%), and myalgia or fatigue (44%). |
| T253 | 1300-1380 | Sentence | denotes | Less common symptoms were sputum production, headache, hemoptysis, and diarrhea. |
| T254 | 1381-1470 | Sentence | denotes | Dyspnea developed in 22 (55%) of 40 patients and 26 (63%) of 41 patients had lymphopenia. |
| T255 | 1471-1614 | Sentence | denotes | The median time from onset of symptoms to first hospital admission was 7.0 days, to shortness of breath was 8.0 days, and to ARDS was 9.0 days. |
| T256 | 1615-1765 | Sentence | denotes | Almost a third of patients developed ARDS requiring intensive care, 5 patients had acute cardiac injury, and 4 patients required assisted ventilation. |
| T257 | 1766-1885 | Sentence | denotes | Eventually 28 patients were discharged, 13 patients were admitted to the intensive care unit (ICU) and 6 patients died. |
| T258 | 1886-1994 | Sentence | denotes | Chen et al. reported 99 patients with SARS-CoV-2 pneumonia admitted to the Jinyintan Hospital in Wuhan [37]. |
| T259 | 1995-2136 | Sentence | denotes | Forty-nine (49%) patients had a history of exposure to the local Huanan seafood market and 50 patients (51%) had chronic underlying diseases. |
| T260 | 2137-2351 | Sentence | denotes | Patients had clinical manifestations of fever (83%), cough (82%), shortness of breath (31%), muscle aches (11%), confusion (9%), headache (8%), sore throat (5%), rhinorrhea (4%), chest pain (2%), and diarrhea (2%). |
| T261 | 2352-2405 | Sentence | denotes | Eighty-nine (90%) patients had more than one symptom. |
| T262 | 2406-2658 | Sentence | denotes | According to their study, many cases presented with organ function damage, including 17 cases with ARDS, 8 cases with acute respiratory injury, 3 cases with acute renal injury, 4 cases with septic shock, and 1 case with ventilator-associated pneumonia. |
| T263 | 2659-2770 | Sentence | denotes | Eventually 31 patients were discharged, 11 patients died, and the remaining 57 patients were still in hospital. |
| T264 | 2771-2900 | Sentence | denotes | At Zhongnan Hospital of Wuhan University in Wuhan, Wang et al. [83] enrolled 138 hospitalized patients with SARS-CoV-2 pneumonia. |
| T265 | 2901-3014 | Sentence | denotes | Common symptoms included fever (98.6%), fatigue (69.6%), dry cough (59.4%), myalgia (34.8%), and dyspnea (31.2%). |
| T266 | 3015-3136 | Sentence | denotes | The median time from first symptom to dyspnea was 5.0 days, to hospital admission was 7.0 days, and to ARDS was 8.0 days. |
| T267 | 3137-3217 | Sentence | denotes | Major complications during hospitalization included ARDS, arrhythmia, and shock. |
| T268 | 3218-3353 | Sentence | denotes | Of the 138 hospitalized patients, 47 recovered and have been discharged, 36 patients were admitted to the ICU and 6 patients have died. |
| T269 | 3354-3470 | Sentence | denotes | Chang et al. [84] reported 13 confirmed patients outside of Wuhan, including 2 children (aged 2 years and 15 years). |
| T270 | 3471-3526 | Sentence | denotes | Twelve patients (92%) had fever before hospitalization. |
| T271 | 3527-3629 | Sentence | denotes | Other symptoms included upper airway congestion (62%), cough (46%), myalgia (23%), and headache (23%). |
| T272 | 3630-3657 | Sentence | denotes | All the patients recovered. |
| T273 | 3658-3772 | Sentence | denotes | Guan et al. [85] reported 1099 confirmed patients from 552 hospitals in the whole of China as of January 29, 2020. |
| T274 | 3773-3895 | Sentence | denotes | The most common symptoms including fever (87.9%) and cough (67.7%), whereas diarrhea (3.7%) and vomiting (5.0%) were rare. |
| T275 | 3896-4027 | Sentence | denotes | They also pointed out that only 43.8% of the patients had fever on presentation but 87.9% developed fever after being hospitalized. |
| T276 | 4028-4141 | Sentence | denotes | Moreover, compared with non-severe cases, any underlying diseases were significantly more common in severe cases. |
| T277 | 4142-4223 | Sentence | denotes | The most common complication was pneumonia (79.1%), ARDS (3.4%) and shock (1.0%). |
| T278 | 4224-4305 | Sentence | denotes | Of the 1099 patients, 55 patients were admitted to the ICU, and 15 patients died. |
| T279 | 4306-4548 | Sentence | denotes | There were therefore a total of 41, 99 and 138 (total 278) cases of SARS-CoV pneumonia admitted in the 3 regional hospitals closest to the Huanan Seafood Market that resulted in 6, 11 and 6 deaths (23 deaths) or a case fatality rate of 0.82%. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 649 | 274-282 | Species | denotes | patients | Tax:9606 |
| 650 | 367-375 | Species | denotes | patients | Tax:9606 |
| 651 | 585-593 | Species | denotes | patients | Tax:9606 |
| 652 | 802-810 | Species | denotes | patients | Tax:9606 |
| 653 | 220-228 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 654 | 237-242 | Disease | denotes | fever | MESH:D005334 |
| 655 | 244-251 | Disease | denotes | fatigue | MESH:D005221 |
| 656 | 257-266 | Disease | denotes | dry cough | MESH:D003371 |
| 657 | 335-346 | Disease | denotes | sore throat | MESH:D010608 |
| 658 | 352-360 | Disease | denotes | diarrhea | MESH:D003967 |
| 659 | 388-397 | Disease | denotes | low fever | MESH:D005334 |
| 660 | 404-411 | Disease | denotes | fatigue | MESH:D005221 |
| 661 | 420-429 | Disease | denotes | pneumonia | MESH:D011014 |
| 662 | 452-461 | Disease | denotes | infection | MESH:D007239 |
| 663 | 472-481 | Disease | denotes | pneumonia | MESH:D011014 |
| 664 | 483-502 | Disease | denotes | shortness of breath | MESH:D004417 |
| 665 | 565-574 | Disease | denotes | infection | MESH:D007239 |
| 666 | 618-653 | Disease | denotes | acute respiratory distress syndrome | MESH:D012128 |
| 667 | 655-659 | Disease | denotes | ARDS | MESH:D012128 |
| 668 | 662-674 | Disease | denotes | septic shock | MESH:D012772 |
| 669 | 676-694 | Disease | denotes | metabolic acidosis | MESH:D000138 |
| 670 | 696-719 | Disease | denotes | coagulation dysfunction | MESH:D001778 |
| 671 | 730-735 | Disease | denotes | death | MESH:D003643 |
| 672 | 847-852 | Disease | denotes | fever | MESH:D005334 |
| 673 | 872-877 | Disease | denotes | fever | MESH:D005334 |
| 700 | 1001-1009 | Species | denotes | patients | Tax:9606 |
| 701 | 1143-1151 | Species | denotes | patients | Tax:9606 |
| 702 | 1417-1425 | Species | denotes | patients | Tax:9606 |
| 703 | 1445-1453 | Species | denotes | patients | Tax:9606 |
| 704 | 1633-1641 | Species | denotes | patients | Tax:9606 |
| 705 | 1685-1693 | Species | denotes | patients | Tax:9606 |
| 706 | 1726-1734 | Species | denotes | patients | Tax:9606 |
| 707 | 1780-1788 | Species | denotes | patients | Tax:9606 |
| 708 | 1809-1817 | Species | denotes | patients | Tax:9606 |
| 709 | 1871-1879 | Species | denotes | patients | Tax:9606 |
| 710 | 927-935 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 711 | 1085-1093 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 712 | 1244-1249 | Disease | denotes | fever | MESH:D005334 |
| 713 | 1257-1262 | Disease | denotes | cough | MESH:D003371 |
| 714 | 1274-1281 | Disease | denotes | myalgia | MESH:D063806 |
| 715 | 1285-1292 | Disease | denotes | fatigue | MESH:D005221 |
| 716 | 1345-1353 | Disease | denotes | headache | MESH:D006261 |
| 717 | 1355-1365 | Disease | denotes | hemoptysis | MESH:D006469 |
| 718 | 1371-1379 | Disease | denotes | diarrhea | MESH:D003967 |
| 719 | 1381-1388 | Disease | denotes | Dyspnea | MESH:D004417 |
| 720 | 1458-1469 | Disease | denotes | lymphopenia | MESH:D008231 |
| 721 | 1555-1574 | Disease | denotes | shortness of breath | MESH:D004417 |
| 722 | 1596-1600 | Disease | denotes | ARDS | MESH:D012128 |
| 723 | 1652-1656 | Disease | denotes | ARDS | MESH:D012128 |
| 724 | 1704-1718 | Disease | denotes | cardiac injury | MESH:D006331 |
| 725 | 1880-1884 | Disease | denotes | died | MESH:D003643 |
| 750 | 1910-1918 | Species | denotes | patients | Tax:9606 |
| 751 | 2012-2020 | Species | denotes | patients | Tax:9606 |
| 752 | 2089-2097 | Species | denotes | patients | Tax:9606 |
| 753 | 2137-2145 | Species | denotes | Patients | Tax:9606 |
| 754 | 2370-2378 | Species | denotes | patients | Tax:9606 |
| 755 | 2673-2681 | Species | denotes | patients | Tax:9606 |
| 756 | 2702-2710 | Species | denotes | patients | Tax:9606 |
| 757 | 2738-2746 | Species | denotes | patients | Tax:9606 |
| 758 | 1924-1944 | Disease | denotes | SARS-CoV-2 pneumonia | MESH:C000657245 |
| 759 | 2177-2182 | Disease | denotes | fever | MESH:D005334 |
| 760 | 2190-2195 | Disease | denotes | cough | MESH:D003371 |
| 761 | 2203-2222 | Disease | denotes | shortness of breath | MESH:D004417 |
| 762 | 2230-2242 | Disease | denotes | muscle aches | MESH:D063806 |
| 763 | 2266-2274 | Disease | denotes | headache | MESH:D006261 |
| 764 | 2281-2292 | Disease | denotes | sore throat | MESH:D010608 |
| 765 | 2299-2309 | Disease | denotes | rhinorrhea | MESH:D012818 |
| 766 | 2316-2326 | Disease | denotes | chest pain | MESH:D002637 |
| 767 | 2337-2345 | Disease | denotes | diarrhea | MESH:D003967 |
| 768 | 2505-2509 | Disease | denotes | ARDS | MESH:D012128 |
| 769 | 2530-2548 | Disease | denotes | respiratory injury | MESH:D012131 |
| 770 | 2569-2581 | Disease | denotes | renal injury | MESH:D007674 |
| 771 | 2596-2608 | Disease | denotes | septic shock | MESH:D012772 |
| 772 | 2648-2657 | Disease | denotes | pneumonia | MESH:D011014 |
| 773 | 2711-2715 | Disease | denotes | died | MESH:D003643 |
| 790 | 2865-2873 | Species | denotes | patients | Tax:9606 |
| 791 | 3242-3250 | Species | denotes | patients | Tax:9606 |
| 792 | 3294-3302 | Species | denotes | patients | Tax:9606 |
| 793 | 3334-3342 | Species | denotes | patients | Tax:9606 |
| 794 | 2879-2899 | Disease | denotes | SARS-CoV-2 pneumonia | MESH:C000657245 |
| 795 | 2926-2931 | Disease | denotes | fever | MESH:D005334 |
| 796 | 2941-2948 | Disease | denotes | fatigue | MESH:D005221 |
| 797 | 2958-2967 | Disease | denotes | dry cough | MESH:D003371 |
| 798 | 2977-2984 | Disease | denotes | myalgia | MESH:D063806 |
| 799 | 2998-3005 | Disease | denotes | dyspnea | MESH:D004417 |
| 800 | 3053-3060 | Disease | denotes | dyspnea | MESH:D004417 |
| 801 | 3118-3122 | Disease | denotes | ARDS | MESH:D012128 |
| 802 | 3189-3193 | Disease | denotes | ARDS | MESH:D012128 |
| 803 | 3195-3205 | Disease | denotes | arrhythmia | MESH:D001145 |
| 804 | 3211-3216 | Disease | denotes | shock | MESH:D012769 |
| 805 | 3348-3352 | Disease | denotes | died | MESH:D003643 |
| 814 | 3394-3402 | Species | denotes | patients | Tax:9606 |
| 815 | 3433-3441 | Species | denotes | children | Tax:9606 |
| 816 | 3478-3486 | Species | denotes | patients | Tax:9606 |
| 817 | 3638-3646 | Species | denotes | patients | Tax:9606 |
| 818 | 3497-3502 | Disease | denotes | fever | MESH:D005334 |
| 819 | 3582-3587 | Disease | denotes | cough | MESH:D003371 |
| 820 | 3595-3602 | Disease | denotes | myalgia | MESH:D063806 |
| 821 | 3614-3622 | Disease | denotes | headache | MESH:D006261 |
| 837 | 3699-3707 | Species | denotes | patients | Tax:9606 |
| 838 | 3941-3949 | Species | denotes | patients | Tax:9606 |
| 839 | 4236-4244 | Species | denotes | patients | Tax:9606 |
| 840 | 4249-4257 | Species | denotes | patients | Tax:9606 |
| 841 | 4291-4299 | Species | denotes | patients | Tax:9606 |
| 842 | 3808-3813 | Disease | denotes | fever | MESH:D005334 |
| 843 | 3826-3831 | Disease | denotes | cough | MESH:D003371 |
| 844 | 3849-3857 | Disease | denotes | diarrhea | MESH:D003967 |
| 845 | 3869-3877 | Disease | denotes | vomiting | MESH:D014839 |
| 846 | 3954-3959 | Disease | denotes | fever | MESH:D005334 |
| 847 | 3996-4001 | Disease | denotes | fever | MESH:D005334 |
| 848 | 4175-4184 | Disease | denotes | pneumonia | MESH:D011014 |
| 849 | 4194-4198 | Disease | denotes | ARDS | MESH:D012128 |
| 850 | 4210-4215 | Disease | denotes | shock | MESH:D012769 |
| 851 | 4300-4304 | Disease | denotes | died | MESH:D003643 |
| 855 | 4374-4392 | Disease | denotes | SARS-CoV pneumonia | MESH:C000657245 |
| 856 | 4496-4502 | Disease | denotes | deaths | MESH:D003643 |
| 857 | 4507-4513 | Disease | denotes | deaths | MESH:D003643 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32143990-31986264-55637406 | 937-939 | 31986264 | denotes | 26 |