PMC:7126544 / 14014-16322
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T28 | 1072-1076 | Body_part | denotes | body | http://purl.org/sig/ont/fma/fma256135 |
| T29 | 1090-1106 | Body_part | denotes | white blood cell | http://purl.org/sig/ont/fma/fma62852 |
| T30 | 1102-1106 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T31 | 1117-1122 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T12 | 1096-1101 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T13 | 1117-1122 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T115 | 41-45 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T116 | 149-153 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T117 | 268-272 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T118 | 352-356 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T119 | 900-904 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T120 | 1233-1237 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T121 | 1321-1325 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T122 | 1519-1523 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T123 | 1640-1644 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T124 | 1738-1742 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T125 | 1744-1753 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T126 | 1892-1896 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T127 | 2192-2201 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T125 | 349-351 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
| T126 | 411-420 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signaling |
| T127 | 546-547 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T128 | 1039-1040 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T129 | 1096-1101 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T130 | 1102-1106 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T131 | 1117-1122 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T132 | 1206-1214 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | actively |
| T133 | 1306-1307 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T134 | 1444-1445 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T135 | 1587-1592 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T136 | 2040-2045 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T137 | 2285-2287 | http://purl.obolibrary.org/obo/CLO_0053799 | denotes | 45 |
| T138 | 2291-2299 | http://purl.obolibrary.org/obo/CLO_0001013 | denotes | 46], [47 |
| T139 | 2291-2299 | http://purl.obolibrary.org/obo/CLO_0052464 | denotes | 46], [47 |
| T140 | 2303-2305 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16 | 411-420 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T13 | 923-928 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T14 | 1021-1026 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T15 | 1135-1140 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T115 | 0-104 | Sentence | denotes | The steps that led to the containment of SARS can be illustrated by the events that occurred in Beijing. |
| T116 | 105-185 | Sentence | denotes | Beijing experienced the largest outbreak of SARS beginning on the March 5, 2003. |
| T117 | 186-308 | Sentence | denotes | The outbreak peaked within 6 weeks on the April 25, 2003 when 173 newly suspected SARS cases were hospitalized daily [46]. |
| T118 | 309-456 | Sentence | denotes | On the June 20, 2003, the last batch of 18 SARS patients recovered and were discharged from hospital, signaling the end of the pandemic in Beijing. |
| T119 | 457-587 | Sentence | denotes | The prompt resolution of the outbreak in Beijing was attributed to the rapid adoption of a series of effective control measures.1. |
| T120 | 588-690 | Sentence | denotes | Thousands of local and military health workers were deployed for emergency management of the outbreak. |
| T121 | 691-836 | Sentence | denotes | Large quantities of emergency supplies including personal protective equipment (PPE) and medical apparat were sent to front-line medical sectors. |
| T122 | 837-905 | Sentence | denotes | These people and materials were key to winning the war against SARS. |
| T123 | 906-908 | Sentence | denotes | 2. |
| T124 | 909-1000 | Sentence | denotes | More than 100 fever clinics were set up in all secondary and tertiary hospitals in Beijing. |
| T125 | 1001-1134 | Sentence | denotes | People visiting the fever clinics had a physical examination including body temperature, white blood cell count and chest radiograph. |
| T126 | 1135-1198 | Sentence | denotes | Fever clinics played an important role in screening and triage. |
| T127 | 1199-1201 | Sentence | denotes | 3. |
| T128 | 1202-1285 | Sentence | denotes | All actively ill patients with SARS were concentrated in designated hospital wards. |
| T129 | 1286-1413 | Sentence | denotes | On the May 1, 2003, a new 1000-bed SARS hospital (Xiaotangshan Hospital, Beijing) was built and put into operation immediately. |
| T130 | 1414-1611 | Sentence | denotes | The advantages of having such a facility was that it was more conducive to the centralized management of SARS patients, and at the same time, it reduced transmission of the virus to healthy people. |
| T131 | 1612-1614 | Sentence | denotes | 4. |
| T132 | 1615-1781 | Sentence | denotes | During the period of the SARS outbreak, more than 60,000 HCWs received medical training in the management of patients with SARS, infection control and the use of PPE. |
| T133 | 1782-1784 | Sentence | denotes | 5. |
| T134 | 1785-2046 | Sentence | denotes | Multiple measures were taken to reduce person-to-person transmission, including isolation of patients with SARS, tracing and quarantine of close contacts, transit site surveillance and closing poorly maintained facilities that could enhance spread of the virus. |
| T135 | 2047-2049 | Sentence | denotes | 6. |
| T136 | 2050-2089 | Sentence | denotes | Information dissemination was critical. |
| T137 | 2090-2308 | Sentence | denotes | Timely and accurate reporting of the status of the epidemic and scientific guidance on prevention and infection control played important roles in stabilizing people and overcoming the epidemic [[45], [46], [47], [48]]. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 351 | 843-849 | Species | denotes | people | Tax:9606 |
| 356 | 1001-1007 | Species | denotes | People | Tax:9606 |
| 357 | 923-928 | Disease | denotes | fever | MESH:D005334 |
| 358 | 1021-1026 | Disease | denotes | fever | MESH:D005334 |
| 359 | 1135-1140 | Disease | denotes | Fever | MESH:D005334 |
| 363 | 1219-1227 | Species | denotes | patients | Tax:9606 |
| 364 | 1524-1532 | Species | denotes | patients | Tax:9606 |
| 365 | 1604-1610 | Species | denotes | people | Tax:9606 |
| 368 | 1724-1732 | Species | denotes | patients | Tax:9606 |
| 369 | 1744-1753 | Disease | denotes | infection | MESH:D007239 |
| 371 | 1878-1886 | Species | denotes | patients | Tax:9606 |
| 374 | 2248-2254 | Species | denotes | people | Tax:9606 |
| 375 | 2192-2201 | Disease | denotes | infection | MESH:D007239 |
| 377 | 357-365 | Species | denotes | patients | Tax:9606 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32143990-15306395-55637386 | 2285-2287 | 15306395 | denotes | 45 |
| 32143990-14519236-55637387 | 2303-2305 | 14519236 | denotes | 48 |