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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T2 122-126 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T3 2979-2983 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T4 5437-5441 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T5 5764-5770 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T6 7068-7072 Body_part denotes eyes http://purl.org/sig/ont/fma/fma54448
T7 7085-7089 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T8 8955-8959 Body_part denotes neck http://purl.org/sig/ont/fma/fma7155
T9 8964-8969 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T10 9109-9114 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T11 10732-10736 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T12 10795-10800 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T13 10885-10890 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T14 10994-10999 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T15 11498-11503 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 122-126 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T3 2979-2983 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033
T4 5437-5441 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T5 7085-7089 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T6 8955-8959 Body_part denotes neck http://purl.obolibrary.org/obo/UBERON_0000974
T7 8964-8969 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T8 9109-9114 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T9 10732-10736 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T10 10795-10800 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T11 10885-10890 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T12 10994-10999 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T13 11498-11503 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T31 507-515 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T32 641-649 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T33 2038-2046 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T34 2240-2248 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T35 2437-2446 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T36 2591-2600 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T37 2782-2791 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T38 2886-2895 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T39 3026-3035 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T40 3177-3186 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T41 3455-3463 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T42 3731-3740 Disease denotes Pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T43 4305-4313 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T44 5282-5290 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T45 5587-5596 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T46 5978-5986 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T47 6230-6239 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T48 6267-6275 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T49 6524-6532 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T50 6750-6759 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T51 6909-6918 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T52 7347-7355 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T53 7356-7365 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T54 7617-7625 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T55 7701-7725 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T56 7842-7850 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T57 7853-7877 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T58 7922-7931 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T59 7997-8005 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T60 8063-8065 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319
T61 8232-8240 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T62 9739-9747 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T63 10737-10746 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T64 10920-10928 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T65 10929-10938 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T66 11025-11033 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T67 11034-11043 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T68 11449-11457 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T69 11541-11549 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T70 13685-13693 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T26 122-126 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T27 388-393 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T28 542-543 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T29 588-589 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T30 900-903 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T31 1076-1078 http://purl.obolibrary.org/obo/CLO_0007860 denotes MR
T32 1108-1115 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T33 1166-1173 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T34 1397-1399 http://purl.obolibrary.org/obo/CLO_0007860 denotes MR
T35 1507-1514 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T36 1595-1597 http://purl.obolibrary.org/obo/CLO_0007860 denotes MR
T37 1666-1668 http://purl.obolibrary.org/obo/CLO_0007860 denotes MR
T38 1743-1745 http://purl.obolibrary.org/obo/CLO_0007860 denotes MR
T39 1766-1773 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T40 2979-2983 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T41 2979-2983 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head
T42 4324-4325 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T43 4606-4607 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T44 5010-5017 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T45 5437-5441 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T46 5841-5842 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T47 5854-5855 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T48 6638-6639 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T49 7068-7072 http://www.ebi.ac.uk/efo/EFO_0000827 denotes eyes
T50 7099-7105 http://purl.obolibrary.org/obo/UBERON_0001456 denotes facing
T51 7732-7739 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T52 8955-8959 http://www.ebi.ac.uk/efo/EFO_0000967 denotes neck
T53 8964-8969 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T54 9098-9099 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T55 9109-9114 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T56 10159-10160 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 10732-10736 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T58 10732-10736 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T59 10795-10800 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T60 10885-10890 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T61 10994-10999 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T62 11498-11503 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T63 11976-11982 http://purl.obolibrary.org/obo/BFO_0000030 denotes Object
T64 12005-12011 http://purl.obolibrary.org/obo/BFO_0000030 denotes Object
T65 12511-12512 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T66 12863-12864 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T67 13040-13041 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T68 13336-13337 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T16 1076-1078 Chemical denotes MR http://purl.obolibrary.org/obo/CHEBI_74698
T17 1187-1189 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T18 1227-1229 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T19 1397-1399 Chemical denotes MR http://purl.obolibrary.org/obo/CHEBI_74698
T20 1418-1420 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T21 1494-1496 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T22 1595-1597 Chemical denotes MR http://purl.obolibrary.org/obo/CHEBI_74698
T23 1666-1668 Chemical denotes MR http://purl.obolibrary.org/obo/CHEBI_74698
T24 1743-1745 Chemical denotes MR http://purl.obolibrary.org/obo/CHEBI_74698
T25 3748-3751 Chemical denotes NHC http://purl.obolibrary.org/obo/CHEBI_51369
T26 3933-3939 Chemical denotes buffer http://purl.obolibrary.org/obo/CHEBI_35225
T27 4091-4093 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T28 4169-4171 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T29 4253-4255 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T30 4481-4483 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T31 4546-4552 Chemical denotes buffer http://purl.obolibrary.org/obo/CHEBI_35225
T32 4873-4879 Chemical denotes buffer http://purl.obolibrary.org/obo/CHEBI_35225
T33 5005-5007 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T34 6333-6338 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T35 6629-6634 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T36 6702-6707 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T37 7727-7729 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T38 11420-11422 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T39 11475-11478 Chemical denotes NHC http://purl.obolibrary.org/obo/CHEBI_51369
T40 11504-11506 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T41 11598-11600 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T42 11705-11707 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T43 11819-11821 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T44 12045-12053 Chemical denotes chlorine http://purl.obolibrary.org/obo/CHEBI_23116|http://purl.obolibrary.org/obo/CHEBI_29310
T46 12065-12077 Chemical denotes disinfectant http://purl.obolibrary.org/obo/CHEBI_48219
T47 12100-12107 Chemical denotes ethanol http://purl.obolibrary.org/obo/CHEBI_16236
T48 12247-12255 Chemical denotes chlorine http://purl.obolibrary.org/obo/CHEBI_23116|http://purl.obolibrary.org/obo/CHEBI_29310
T50 12267-12279 Chemical denotes disinfectant http://purl.obolibrary.org/obo/CHEBI_48219
T51 12285-12287 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T52 12346-12353 Chemical denotes ethanol http://purl.obolibrary.org/obo/CHEBI_16236
T53 12376-12382 Chemical denotes buffer http://purl.obolibrary.org/obo/CHEBI_35225
T54 12420-12428 Chemical denotes chlorine http://purl.obolibrary.org/obo/CHEBI_23116|http://purl.obolibrary.org/obo/CHEBI_29310
T56 12440-12452 Chemical denotes disinfectant http://purl.obolibrary.org/obo/CHEBI_48219
T57 12456-12463 Chemical denotes alcohol http://purl.obolibrary.org/obo/CHEBI_16236|http://purl.obolibrary.org/obo/CHEBI_30879
T59 12486-12498 Chemical denotes disinfectant http://purl.obolibrary.org/obo/CHEBI_48219
T60 12986-12994 Chemical denotes chlorine http://purl.obolibrary.org/obo/CHEBI_23116|http://purl.obolibrary.org/obo/CHEBI_29310
T62 13006-13018 Chemical denotes disinfectant http://purl.obolibrary.org/obo/CHEBI_48219
T63 13106-13114 Chemical denotes chlorine http://purl.obolibrary.org/obo/CHEBI_23116|http://purl.obolibrary.org/obo/CHEBI_29310
T65 13126-13138 Chemical denotes disinfectant http://purl.obolibrary.org/obo/CHEBI_48219
T66 13367-13375 Chemical denotes chlorine http://purl.obolibrary.org/obo/CHEBI_23116|http://purl.obolibrary.org/obo/CHEBI_29310
T68 13387-13399 Chemical denotes disinfectant http://purl.obolibrary.org/obo/CHEBI_48219
T69 13607-13619 Chemical denotes disinfectant http://purl.obolibrary.org/obo/CHEBI_48219

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T2 2692-2703 http://purl.obolibrary.org/obo/GO_0065007 denotes regulations
T3 7132-7138 http://purl.obolibrary.org/obo/GO_0007631 denotes eating
T4 11219-11230 http://purl.obolibrary.org/obo/GO_0065007 denotes regulations

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T4 208-213 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T5 238-243 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T6 448-453 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T7 544-549 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T8 746-751 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T9 823-828 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T10 1281-1285 Phenotype denotes PACS http://purl.obolibrary.org/obo/HP_0006699
T11 2048-2053 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T12 2298-2303 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T13 2326-2331 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T14 3731-3740 Phenotype denotes Pneumonia http://purl.obolibrary.org/obo/HP_0002090
T15 4010-4015 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T16 4040-4045 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T17 4234-4239 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T18 4247-4252 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T19 4390-4395 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T20 4452-4457 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T21 4475-4480 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T22 5807-5812 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T23 7526-7531 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T24 7951-7956 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T25 8017-8022 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T26 8253-8258 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T27 8323-8328 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T28 8472-8477 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T29 8506-8511 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T30 9372-9377 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T31 9599-9604 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T32 10120-10125 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T33 10321-10326 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T34 10415-10420 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T35 11127-11132 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T36 11364-11369 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T37 11414-11419 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T38 13442-13447 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T42 0-7 Sentence denotes Methods
T43 8-673 Sentence denotes The hospital provided personal protective equipment (medical protective clothing, surgical cap, N95 mask, gloves, face shields, and goggles) to all its health care staff, erected three medical tents (fever tents) for screening of fever cases in the parking lot of the emergency department, planned an examination route and examination area for patients suspected of harboring the virus, and placed confirmed patients in an isolation ward. “Fever” was the colloquial term used to designate suspected COVID-19 based on symptoms such as a fever or with an epidemiological history of a potential exposure as well as those with confirmed COVID-19 referred for treatment.
T44 674-874 Sentence denotes Furthermore, during outbreak, emergency and outpatient patients without fever were asked for information such as epidemiological history and sent to fever tents as long as they met suspected criteria.
T45 875-1021 Sentence denotes The radiology department has 65 diagnostic radiologists and 161 other staff members (trained technologists, nurses, engineers, and support staff).
T46 1022-1286 Sentence denotes The equipment of the radiology department includes 12 MR scanners, 14 CT scanners, 15 digital subtraction angiography (DSA) systems, 32 sets of digital radiography (DR) systems (including 9 mobile bedside DR sets), and 130 imaging diagnostic workstations for PACS.
T47 1287-1373 Sentence denotes Most of the equipment is distributed among four buildings at the hospital main campus.
T48 1374-1579 Sentence denotes Four CT scanners, four MR scanners, and one DR are located on the first floor of the first inpatient building, and nine DR and eight digital subtraction angiography systems are located on the second floor.
T49 1580-1650 Sentence denotes One CT and one MR scanner are located in the third inpatient building.
T50 1651-1721 Sentence denotes One CT and one MR scanner are located in the sixth inpatient building.
T51 1722-1836 Sentence denotes Two CT scanners, two MR scanners, and seven digital subtraction angiography are located in the technical building.
T52 1837-1929 Sentence denotes The rest of the equipment is located in the seventh inpatient building in the branch campus.
T53 1930-2047 Sentence denotes The first inpatient building, located next to the emergency department, was reconfigured to handle cases of COVID-19.
T54 2048-2249 Sentence denotes Fever tents were set up by the emergency department in the emergency department parking lot to separate normal emergency patients from patients with symptoms or exposure history suspicious of COVID-19.
T55 2250-2407 Sentence denotes We established separate means of access between fever tents and between the fever examination areas of the radiology department to avoid cross-contamination.
T56 2408-2635 Sentence denotes The emergency management and infection control measures, as described later in this article and implemented in the radiology department during the outbreak, have been approved by the infection control committee of the hospital.
T57 2636-2745 Sentence denotes These measures are in accordance with relevant laws and regulations to protect patients as well as the staff.
T58 2747-2804 Sentence denotes Radiology Emergency Management and Infection Control Team
T59 2805-2917 Sentence denotes The radiology department director chaired the Radiology Emergency Management and Infection Control Team (EMICT).
T60 2918-3078 Sentence denotes Its members include the deputy director, chief technologist, head nurse, equipment engineer supervisor, and infection control nurse of the radiology department.
T61 3079-3597 Sentence denotes Team responsibilities included (1) coordination between the hospital’s management and planning of infection control and radiology departments; (2) collection of the most up-to-date protection-related information to educate and train staff in the department; (3) reallocation of staff according to the actual situation; (4) establishment of the CT procedures for patients with COVID-19; and (5) establishment of an emergency management plan for the radiology department to ensure that the department would run normally.
T62 3599-3617 Sentence denotes Suspected Patients
T63 3618-3797 Sentence denotes The suspected patients were identified according to the Diagnosis and Treatment Program of the Novel Coronavirus Pneumonia of the NHC [4], mainly based on epidemiological history.
T64 3799-3842 Sentence denotes Reconfiguration of the Radiology Department
T65 3843-3967 Sentence denotes The radiology department was divided into four areas [5]: contaminated, semicontaminated, buffer, and clean areas (Fig. 1 ).
T66 3968-4145 Sentence denotes The contaminated area is connected to the fever clinic and includes the fever access way, the CT examination room, and the DR examination room for confirmed and suspected cases.
T67 4146-4314 Sentence denotes One CT scanner and one DR system closest to the emergency department are designated the fever-CT and fever-DR to examine patients with suspected and confirmed COVID-19.
T68 4315-4412 Sentence denotes There is a separate dedicated access between the contaminated area and the fever screening tents.
T69 4413-4541 Sentence denotes The semicontaminated area includes the fever-CT control room, fever-DR control room, and other patient examination access areas.
T70 4542-4640 Sentence denotes The buffer zone includes access areas for medical personnel and a dressing area for technologists.
T71 4641-4715 Sentence denotes The clean area includes the administrative office and the diagnostic room.
T72 4716-4938 Sentence denotes Fig 1 Diagram of the layout of our radiology department was divided into four areas: contaminated (shaded in black), semicontaminated (shaded in dark gray), buffer (shaded in light gray), and clean areas (shaded in white).
T73 4939-5004 Sentence denotes The contaminated area was separated from other areas by barriers.
T74 5005-5030 Sentence denotes DR = digital radiography.
T75 5031-5109 Sentence denotes The contaminated area was isolated from other areas using physical barricades.
T76 5110-5177 Sentence denotes Directional signs were newly installed to guide patients and staff.
T77 5179-5220 Sentence denotes Personal Protection and Training of Staff
T78 5221-5463 Sentence denotes For providing care for patients with confirmed and suspected COVID-19, all hospital staff are required to wear complete personal protective equipment [7]: medical protective clothing, surgical cap, N95 mask, gloves, face shields, and goggles.
T79 5464-5611 Sentence denotes Wearing and removing of the equipment must be performed in accordance with the procedures and under the supervision of the infection control nurse.
T80 5612-5785 Sentence denotes Because staff members working in the contaminated area are under much situational pressure, periodically taking time off could lower their physical and mental stress levels.
T81 5786-5873 Sentence denotes The technologists on fever-CT duty shifts are provided a break once a week for 4 hours.
T82 5874-5987 Sentence denotes In addition, the health of staff in the contaminated area must be monitored closely for the symptoms of COVID-19.
T83 5988-6038 Sentence denotes Pregnant staff must be assigned to the clean area.
T84 6039-6164 Sentence denotes The EMICT formulates and continually updates guidelines and educates all staff for West China Hospital of Sichuan University.
T85 6165-6385 Sentence denotes The EMICT training for staff mainly involves documents regarding infection control and CT findings of COVID-19 and maintains an EMICT WeChat (Tencent, Shenzhen, China) group for West China Hospital of Sichuan University.
T86 6386-6443 Sentence denotes WeChat is the most widely used social media app in China.
T87 6444-6652 Sentence denotes The EMICT releases the latest national and hospital-based information regarding COVID-19, guidance documents, and other notices from the hospital and radiology department in the WeChat group on a daily basis.
T88 6653-6717 Sentence denotes Staff can also report to the EMICT in the WeChat group any time.
T89 6718-6830 Sentence denotes Protocols for each modality and infection control instructions are posted on the walls in all examination rooms.
T90 6831-7220 Sentence denotes The EMICT periodically reminds staff to undertake personal measures to reduce infection, such as wearing masks at all instances in the radiology department and N95 masks if working in the contaminated area; not touching the mask and the eyes; practicing hand hygiene; facing away from colleagues when eating, drinking, and talking; and not using personal cellular telephones while on duty.
T91 7221-7441 Sentence denotes In addition, the chief thoracic radiologist provided lectures on all radiologists and technologists on typical CT findings of COVID-19 infection using materials developed in Wuhan, the epicenter of the outbreak in China.
T92 7443-7468 Sentence denotes CT Examination Procedures
T93 7469-7626 Sentence denotes There are two sets of procedures for CT examination: the fever-CT procedure (Fig. 2 ) and routine CT procedure (Fig. 3 ) for those not suspected of COVID-19.
T94 7627-7726 Sentence denotes Fig 2 Diagram shows CT protocol for suspected and confirmed patients with coronavirus disease 2019.
T95 7727-7787 Sentence denotes DR = digital radiography; HIS = Hospital Information System.
T96 7788-7841 Sentence denotes Fig 3 Diagram shows CT protocol for regular patients.
T97 7842-7945 Sentence denotes COVID-19 = coronavirus disease 2019; EMICT = Radiology Emergency Management and Infection Control Team.
T98 7947-8005 Sentence denotes The Fever-CT Procedure for Suspected or Confirmed COVID-19
T99 8006-8164 Sentence denotes Before the fever-CT technologist operates the equipment, he or she should wear personal protective equipment according to three-level protection standard [6].
T100 8165-8318 Sentence denotes Before the CT examination of patients with suspected and confirmed COVID-19 begins, the fever tent or isolation ward notifies the radiologist in advance.
T101 8319-8448 Sentence denotes The fever-CT technologist checks the equipment and prepares to disinfect the imaging equipment immediately after the examination.
T102 8449-8524 Sentence denotes The patient enters the fever-CT waiting area through the fever access area.
T103 8525-8635 Sentence denotes If the patient can get onto and off the examination table by him- or herself, the patient is allowed to do so.
T104 8636-8797 Sentence denotes If the patient cannot get onto or off the examination table independently, the person accompanying the patient assists the patient, rather than the technologist.
T105 8798-8970 Sentence denotes The technologist checks the patient information and, using an intercom system in the examination room, asks the patient to remove any metal ornaments on the neck and chest.
T106 8971-9075 Sentence denotes Also, by intercom, the technologist trains the patient to hold his or her breath during the examination.
T107 9076-9147 Sentence denotes The technologist uses a low-dose chest CT protocol to scan the patient.
T108 9148-9223 Sentence denotes After scanning, the original images are reconstructed as 1-mm-thick layers.
T109 9224-9390 Sentence denotes The technologist browses the images to ensure that their quality meets the diagnostic requirements and then guides the patient to leave through the fever access area.
T110 9391-9468 Sentence denotes The disposable sheets for patient examination are changed after each patient.
T111 9469-9541 Sentence denotes The equipment is disinfected according to the procedure described later.
T112 9542-9680 Sentence denotes To protect themselves, the technologists assigned to the fever-CT wear N95 mask and other personal protection as established by the EMICT.
T113 9682-9719 Sentence denotes The CT Procedure for Regular Patients
T114 9720-9824 Sentence denotes Some patients with COVID-19 have no symptoms, and they may call at the general clinic for other reasons.
T115 9825-9911 Sentence denotes The CT procedure for regular patients is applicable under the following circumstances.
T116 9912-10056 Sentence denotes When the patient makes an appointment for examination, the staff asks the patient about his or her epidemiological history, symptoms, and signs.
T117 10057-10153 Sentence denotes If suspected criteria are met, the patient will be sent to the fever tent for further screening.
T118 10154-10251 Sentence denotes When a patient presents to the radiology department entrance, his or her temperature is measured.
T119 10252-10358 Sentence denotes If the temperature is higher than 37.2°C, the patient is sent to the fever tent for further investigation.
T120 10359-10476 Sentence denotes Those with no exposure history, suspicious symptoms, or fever are screened in one of the noncontaminated CT scanners.
T121 10477-10542 Sentence denotes The technologists assigned to these scanners wear surgical masks.
T122 10543-10625 Sentence denotes All patients and the people accompanying them are required to wear surgical masks.
T123 10626-10696 Sentence denotes After the CT examination, the technologist browses the images quickly.
T124 10697-10877 Sentence denotes If the CT appearance is typical of lung infection, the technologist immediately reports it to the chest radiologist on duty and asks the patient to wait in the CT examination room.
T125 10878-10986 Sentence denotes If the chest radiologist does not suspect COVID-19 infection, the patient can leave the CT examination room.
T126 10987-11138 Sentence denotes If the chest radiologist does suspect COVID-19 infection, the technologist immediately reports it to the EMICT and sends the patient to the fever tent.
T127 11139-11309 Sentence denotes The floor and equipment in the CT examination room are disinfected according to regulations, and air disinfection is conducted for 30 min before examining other patients.
T128 11310-11412 Sentence denotes These CT scanners are considered noncontaminated (not fever-CTs) after these sterilization procedures.
T129 11414-11444 Sentence denotes Fever-DR Examination Procedure
T130 11445-11561 Sentence denotes The COVID-19 guideline of the NHC does not recommend chest DR because its ability in diagnosing COVID-19 is limited.
T131 11562-11666 Sentence denotes At our hospital, we only use mobile DR units to provide bedside examination for critically ill patients.
T132 11667-11886 Sentence denotes The technologist operating the mobile DR wears personal protective equipment according to the three-level protection standard and sterilizes the mobile DR according to the ward management requirements as described next.
T133 11888-11937 Sentence denotes Equipment and Environment Disinfection Procedures
T134 11939-11973 Sentence denotes Routine Disinfection Procedure [7]
T135 11974-12004 Sentence denotes ▪ Object surface disinfection:
T136 12005-12156 Sentence denotes Object surface is wiped with 1,000 mg/L chlorine-containing disinfectant, wiped twice with 75% ethanol for noncorrosion resistance, once every 4 hours.
T137 12157-12182 Sentence denotes ▪ Equipment disinfection:
T138 12183-12280 Sentence denotes The equipment in the contaminated area is wiped with 2,000 mg/L chlorine-containing disinfectant.
T139 12281-12354 Sentence denotes The DR and CT gantry in the contaminated area are wiped with 75% ethanol.
T140 12355-12517 Sentence denotes The equipment in the buffer area is wiped with 500 to 1,000 mg/L chlorine-containing disinfectant or alcohol-containing disposable disinfectant wipes twice a day.
T141 12518-12537 Sentence denotes ▪ Air disinfection:
T142 12538-12628 Sentence denotes All central air conditioners were turned off to prevent air contamination with each other.
T143 12629-12727 Sentence denotes Polluted area: the door is opened for ventilation, each time more than 30 min, once every 4 hours.
T144 12728-12940 Sentence denotes The air sterilizer is continuously sterilized or the ultraviolet ray is continuously used in the unmanned state for 60 min, four times a day, remembering to close the inner shielding door during air disinfection.
T145 12941-13046 Sentence denotes Other ambient air is sprayed with 1,000 mg/L chlorine-containing disinfectant and ventilated twice a day.
T146 13047-13069 Sentence denotes ▪ Ground disinfection:
T147 13070-13159 Sentence denotes The ground is wiped with 1,000 mg/L chlorine-containing disinfectant, once every 4 hours.
T148 13160-13203 Sentence denotes ▪ When contaminated, disinfect at any time.
T149 13204-13440 Sentence denotes In case of visible contamination, disposable absorbent materials should be used first to completely remove the pollutants, and then a cloth soaked with 2,000 mg/L chlorine-containing disinfectant should be used for 30 min before wiping.
T150 13442-13492 Sentence denotes Fever-CT Disinfection Procedures After Examination
T151 13493-13624 Sentence denotes In addition to the previous procedures, the examination bed is disinfected and ground with 2,000 mg/L chlorinated disinfectant [7].
T152 13626-13710 Sentence denotes Noncontaminated CT Disinfection Procedures After Suspected COVID-19 Case Examination
T153 13711-13856 Sentence denotes In addition to the routine disinfection procedure previously described, air disinfection is conducted for 30 min before examining other patients.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
118 352-360 Species denotes patients Tax:9606
119 416-424 Species denotes patients Tax:9606
120 718-728 Species denotes outpatient Tax:9606
121 729-737 Species denotes patients Tax:9606
122 208-213 Disease denotes fever MESH:D005334
123 238-243 Disease denotes fever MESH:D005334
124 448-453 Disease denotes Fever MESH:D005334
125 507-515 Disease denotes COVID-19 MESH:C000657245
126 544-549 Disease denotes fever MESH:D005334
127 641-649 Disease denotes COVID-19 MESH:C000657245
128 746-751 Disease denotes fever MESH:D005334
129 823-828 Disease denotes fever MESH:D005334
137 2169-2177 Species denotes patients Tax:9606
138 2183-2191 Species denotes patients Tax:9606
139 2038-2046 Disease denotes COVID-19 MESH:C000657245
140 2048-2053 Disease denotes Fever MESH:D005334
141 2240-2248 Disease denotes COVID-19 MESH:C000657245
142 2298-2303 Disease denotes fever MESH:D005334
143 2326-2331 Disease denotes fever MESH:D005334
147 2715-2723 Species denotes patients Tax:9606
148 2437-2446 Disease denotes infection MESH:D007239
149 2591-2600 Disease denotes infection MESH:D007239
151 2782-2791 Disease denotes Infection MESH:D007239
157 3441-3449 Species denotes patients Tax:9606
158 2886-2895 Disease denotes Infection MESH:D007239
159 3026-3035 Disease denotes infection MESH:D007239
160 3177-3186 Disease denotes infection MESH:D007239
161 3455-3463 Disease denotes COVID-19 MESH:C000657245
164 3632-3640 Species denotes patients Tax:9606
165 3713-3740 Disease denotes Novel Coronavirus Pneumonia MESH:C000657245
176 4267-4275 Species denotes patients Tax:9606
177 4508-4515 Species denotes patient Tax:9606
178 4010-4015 Disease denotes fever MESH:D005334
179 4040-4045 Disease denotes fever MESH:D005334
180 4234-4239 Disease denotes fever MESH:D005334
181 4247-4252 Disease denotes fever MESH:D005334
182 4305-4313 Disease denotes COVID-19 MESH:C000657245
183 4390-4395 Disease denotes fever MESH:D005334
184 4452-4457 Disease denotes fever MESH:D005334
185 4475-4480 Disease denotes fever MESH:D005334
187 5158-5166 Species denotes patients Tax:9606
191 5244-5252 Species denotes patients Tax:9606
192 5282-5290 Disease denotes COVID-19 MESH:C000657245
193 5587-5596 Disease denotes infection MESH:D007239
196 5807-5812 Disease denotes fever MESH:D005334
197 5978-5986 Disease denotes COVID-19 MESH:C000657245
203 6230-6239 Disease denotes infection MESH:D007239
204 6267-6275 Disease denotes COVID-19 MESH:C000657245
205 6524-6532 Disease denotes COVID-19 MESH:C000657245
206 6750-6759 Disease denotes infection MESH:D007239
207 6909-6918 Disease denotes infection MESH:D007239
210 7347-7355 Disease denotes COVID-19 MESH:C000657245
211 7356-7365 Disease denotes infection MESH:D007239
215 7687-7695 Species denotes patients Tax:9606
216 7701-7725 Disease denotes coronavirus disease 2019 MESH:C000657245
217 7753-7756 Disease denotes HIS MESH:C538320
221 7832-7840 Species denotes patients Tax:9606
222 7853-7877 Disease denotes coronavirus disease 2019 MESH:C000657245
223 7922-7931 Disease denotes Infection MESH:D007239
226 7526-7531 Disease denotes fever MESH:D005334
227 7617-7625 Disease denotes COVID-19 MESH:C000657245
230 7951-7956 Disease denotes Fever MESH:D005334
231 7997-8005 Disease denotes COVID-19 MESH:C000657245
237 8194-8202 Species denotes patients Tax:9606
238 8017-8022 Disease denotes fever MESH:D005334
239 8232-8240 Disease denotes COVID-19 MESH:C000657245
240 8253-8258 Disease denotes fever MESH:D005334
241 8323-8328 Disease denotes fever MESH:D005334
254 8453-8460 Species denotes patient Tax:9606
255 8532-8539 Species denotes patient Tax:9606
256 8607-8614 Species denotes patient Tax:9606
257 8643-8650 Species denotes patient Tax:9606
258 8739-8746 Species denotes patient Tax:9606
259 8759-8766 Species denotes patient Tax:9606
260 8826-8833 Species denotes patient Tax:9606
261 8910-8917 Species denotes patient Tax:9606
262 9018-9025 Species denotes patient Tax:9606
263 8932-8937 Chemical denotes metal MESH:D008670
264 8472-8477 Disease denotes fever MESH:D005334
265 8506-8511 Disease denotes fever MESH:D005334
271 9139-9146 Species denotes patient Tax:9606
272 9343-9350 Species denotes patient Tax:9606
273 9417-9424 Species denotes patient Tax:9606
274 9460-9467 Species denotes patient Tax:9606
275 9372-9377 Disease denotes fever MESH:D005334
277 9599-9604 Disease denotes fever MESH:D005334
281 9725-9733 Species denotes patients Tax:9606
282 9854-9862 Species denotes patients Tax:9606
283 9739-9747 Disease denotes COVID-19 MESH:C000657245
291 9921-9928 Species denotes patient Tax:9606
292 9986-9993 Species denotes patient Tax:9606
293 10092-10099 Species denotes patient Tax:9606
294 10161-10168 Species denotes patient Tax:9606
295 10298-10305 Species denotes patient Tax:9606
296 10120-10125 Disease denotes fever MESH:D005334
297 10321-10326 Disease denotes fever MESH:D005334
312 10547-10555 Species denotes patients Tax:9606
313 10564-10570 Species denotes people Tax:9606
314 10834-10841 Species denotes patient Tax:9606
315 10944-10951 Species denotes patient Tax:9606
316 11112-11119 Species denotes patient Tax:9606
317 11300-11308 Species denotes patients Tax:9606
318 10415-10420 Disease denotes fever MESH:D005334
319 10732-10746 Disease denotes lung infection MESH:D012141
320 10920-10928 Disease denotes COVID-19 MESH:C000657245
321 10929-10938 Disease denotes infection MESH:D007239
322 11025-11033 Disease denotes COVID-19 MESH:C000657245
323 11034-11043 Disease denotes infection MESH:D007239
324 11127-11132 Disease denotes fever MESH:D005334
325 11364-11369 Disease denotes fever MESH:D005334
327 11414-11419 Disease denotes Fever MESH:D005334
332 11657-11665 Species denotes patients Tax:9606
333 11449-11457 Disease denotes COVID-19 MESH:C000657245
334 11541-11549 Disease denotes COVID-19 MESH:C000657245
335 11642-11656 Disease denotes critically ill MESH:D016638
338 12045-12053 Chemical denotes chlorine MESH:D002713
339 12100-12107 Chemical denotes ethanol MESH:D000431
344 12247-12255 Chemical denotes chlorine MESH:D002713
345 12346-12353 Chemical denotes ethanol MESH:D000431
346 12420-12428 Chemical denotes chlorine MESH:D002713
347 12456-12463 Chemical denotes alcohol MESH:D000438
349 12986-12994 Chemical denotes chlorine MESH:D002713
351 13106-13114 Chemical denotes chlorine MESH:D002713
353 13367-13375 Chemical denotes chlorine MESH:D002713
355 13442-13447 Disease denotes Fever MESH:D005334
357 13595-13619 Chemical denotes chlorinated disinfectant
359 13685-13693 Disease denotes COVID-19 MESH:C000657245
361 13847-13855 Species denotes patients Tax:9606