PMC:7115396 / 2198-2811
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T13 | 285-303 | Body_part | denotes | respiratory system | http://purl.org/sig/ont/fma/fma7158 |
| T14 | 370-374 | Body_part | denotes | head | http://purl.org/sig/ont/fma/fma7154 |
| T15 | 516-522 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T2 | 285-303 | Body_part | denotes | respiratory system | http://purl.obolibrary.org/obo/UBERON_0001004 |
| T3 | 370-374 | Body_part | denotes | head | http://purl.obolibrary.org/obo/UBERON_0000033 |
| T4 | 516-522 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T5 | 555-558 | Body_part | denotes | egg | http://purl.obolibrary.org/obo/UBERON_0007379 |
| T6 | 575-578 | Body_part | denotes | egg | http://purl.obolibrary.org/obo/UBERON_0007379 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T7 | 0-10 | Disease | denotes | Infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T8 | 11-21 | Disease | denotes | bronchitis | http://purl.obolibrary.org/obo/MONDO_0003781 |
| T9 | 52-71 | Disease | denotes | respiratory disease | http://purl.obolibrary.org/obo/MONDO_0005087 |
| T10 | 141-154 | Disease | denotes | viral disease | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T11 | 348-358 | Disease | denotes | depression | http://purl.obolibrary.org/obo/MONDO_0002050 |
| T12 | 536-545 | Disease | denotes | nephritis | http://purl.obolibrary.org/obo/MONDO_0001166 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T32 | 50-51 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T33 | 255-256 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T34 | 285-303 | http://purl.obolibrary.org/obo/UBERON_0001004 | denotes | respiratory system |
| T35 | 370-374 | http://purl.obolibrary.org/obo/UBERON_0000033 | denotes | head |
| T36 | 370-374 | http://www.ebi.ac.uk/efo/EFO_0000964 | denotes | head |
| T37 | 437-442 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T38 | 489-499 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T39 | 516-522 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T40 | 516-522 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
| T41 | 516-522 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
| T42 | 527-533 | http://purl.obolibrary.org/obo/UBERON_0000991 | denotes | gonads |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17 | 0-251 | Sentence | denotes | Infectious bronchitis (IB) was first described as a respiratory disease affecting chicks in the US in 1931 as an acute and highly contagious viral disease, and continues to cause major economic loss within the poultry industry worldwide [1], [2], [3]. |
| T18 | 252-426 | Sentence | denotes | As a result of the damage to the respiratory system, the clinical signs of this disease include depression, coughing, head-shaking, as well as nasal and ocular discharge [1]. |
| T19 | 427-613 | Sentence | denotes | Since the virus causing IB replicates in many non-respiratory epithelial surfaces (e.g., kidney and gonads), nephritis, reduced egg production, and egg quality is also observed [2], [3]. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T3 | 11-21 | Phenotype | denotes | bronchitis | http://purl.obolibrary.org/obo/HP_0012387 |
| T4 | 348-358 | Phenotype | denotes | depression | http://purl.obolibrary.org/obo/HP_0000716 |
| T5 | 360-368 | Phenotype | denotes | coughing | http://purl.obolibrary.org/obo/HP_0012735 |
| T6 | 536-545 | Phenotype | denotes | nephritis | http://purl.obolibrary.org/obo/HP_0000123 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32057575-22702451-143294022 | 238-239 | 22702451 | denotes | 1 |
| 32057575-16537157-143294023 | 243-244 | 16537157 | denotes | 2 |
| 32057575-23397833-143294024 | 248-249 | 23397833 | denotes | 3 |
| 32057575-22702451-143294025 | 423-424 | 22702451 | denotes | 1 |
| 32057575-16537157-143294026 | 605-606 | 16537157 | denotes | 2 |
| 32057575-23397833-143294027 | 610-611 | 23397833 | denotes | 3 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 44 | 0-21 | Disease | denotes | Infectious bronchitis | MESH:D001991 |
| 45 | 52-71 | Disease | denotes | respiratory disease | MESH:D012140 |
| 46 | 141-154 | Disease | denotes | viral disease | MESH:D001102 |
| 47 | 348-358 | Disease | denotes | depression | MESH:D000275 |
| 48 | 360-368 | Disease | denotes | coughing | MESH:D003371 |
| 49 | 536-545 | Disease | denotes | nephritis | MESH:D009393 |