PMC:7115396 / 19213-21238 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/7115396","sourcedb":"PMC","sourceid":"7115396","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7115396","text":"3.1 Characterization of the rH120-S1/YZ strain\nAfter being inoculated with the recombinant strains, typical IB lesions in the chick embryos from each group were observed, including amniotic membrane thickening, dwarfing, stunted growth, curling, or death of the embryo (Fig. 2 A). The EID50 of the virus was calculated according to the Reed-Muench method. The titers of the rH120, rIBYZ, and rH120-S1/YZ strains were determined to be 107.3 EID50/mL, 106.8 EID50/mL, and 108.4 EID50/mL, respectively (Fig. 2B).\nFig. 2 The biological characteristics of the rIBVs in SPF chicken embryos. (A) Pathogenicity of recombinant IBVs in infected chick embryos. Five 10-old-day embryonated SPF chicken eggs per group were inoculated with 0.2 mL virus diluent of rH120, rIBYZ, or rH120-S1/YZ. Chick embryo lesions were observed at 144 h post-inoculation at 37 °C. (B) EID50 of the recombinant IBVs, rH120, rIBYZ, and rH120-S1/YZ in SPF chicken embryonated eggs. (C) The multicycle growth kinetics of the recombinant IBVs, rH120, rIBYZ, and rH120-S1/YZ in SPF chicken embryonated eggs. All data are presented as the mean ± standard deviation (SD). Some of the error bars are too small to be seen. The qRT-PCR was carried out with three replicates. Markers of statistical difference were acquired by comparing between rH120 group and rH120-S1/YZ group. ***Indicates an extremely significant difference at P ≤ 0.001; **Indicates a highly significant difference at 0.001 \u003c P ≤ 0.01; *Indicates a significant difference at 0.01 \u003c P ≤ 0.05.\nThe growth kinetics of the rIBVs were assessed by inoculation with 107 copies of virus per egg in 6 eggs from each group. The relative viral load was determined at 12, 18, 24, 36, 48, 72, and 96 h post-inoculation by quantitative real-time RT-PCR. The growth curves of all three strains reached a relatively stable plateau at 36–48 h after infection; the level of viral RNA for the rH120-S1/YZ strain was significantly higher than that of the rIBYZ strain for the majority of the time points (Fig. 2C).","divisions":[{"label":"label","span":{"begin":0,"end":3}},{"label":"title","span":{"begin":5,"end":47}},{"label":"p","span":{"begin":48,"end":1522}},{"label":"figure","span":{"begin":511,"end":1522}},{"label":"label","span":{"begin":511,"end":517}},{"label":"caption","span":{"begin":518,"end":1522}},{"label":"p","span":{"begin":518,"end":1522}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T88","span":{"begin":133,"end":140},"obj":"Body_part"},{"id":"T89","span":{"begin":263,"end":269},"obj":"Body_part"},{"id":"T90","span":{"begin":577,"end":584},"obj":"Body_part"},{"id":"T91","span":{"begin":642,"end":649},"obj":"Body_part"},{"id":"T92","span":{"begin":787,"end":793},"obj":"Body_part"},{"id":"T93","span":{"begin":1893,"end":1896},"obj":"Body_part"}],"attributes":[{"id":"A88","pred":"fma_id","subj":"T88","obj":"http://purl.org/sig/ont/fma/fma296970"},{"id":"A89","pred":"fma_id","subj":"T89","obj":"http://purl.org/sig/ont/fma/fma296970"},{"id":"A90","pred":"fma_id","subj":"T90","obj":"http://purl.org/sig/ont/fma/fma296970"},{"id":"A91","pred":"fma_id","subj":"T91","obj":"http://purl.org/sig/ont/fma/fma296970"},{"id":"A92","pred":"fma_id","subj":"T92","obj":"http://purl.org/sig/ont/fma/fma296970"},{"id":"A93","pred":"fma_id","subj":"T93","obj":"http://purl.org/sig/ont/fma/fma67095"},{"subj":"T88","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T89","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T90","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T91","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T92","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T93","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T26","span":{"begin":263,"end":269},"obj":"Body_part"},{"id":"T27","span":{"begin":787,"end":793},"obj":"Body_part"},{"id":"T28","span":{"begin":1614,"end":1617},"obj":"Body_part"}],"attributes":[{"id":"A26","pred":"uberon_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/UBERON_0000922"},{"id":"A27","pred":"uberon_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/UBERON_0000922"},{"id":"A28","pred":"uberon_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/UBERON_0007379"},{"subj":"T26","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T27","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T29","span":{"begin":1863,"end":1872},"obj":"Disease"}],"attributes":[{"id":"A29","pred":"mondo_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T29","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T250","span":{"begin":35,"end":37},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T251","span":{"begin":133,"end":140},"obj":"http://purl.obolibrary.org/obo/UBERON_0000922"},{"id":"T252","span":{"begin":182,"end":190},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_32524"},{"id":"T253","span":{"begin":191,"end":199},"obj":"http://purl.obolibrary.org/obo/UBERON_0000158"},{"id":"T254","span":{"begin":263,"end":269},"obj":"http://purl.obolibrary.org/obo/UBERON_0000922"},{"id":"T255","span":{"begin":276,"end":279},"obj":"http://purl.obolibrary.org/obo/CLO_0001236"},{"id":"T256","span":{"begin":299,"end":304},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T257","span":{"begin":399,"end":401},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T258","span":{"begin":569,"end":576},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T259","span":{"begin":577,"end":584},"obj":"http://purl.obolibrary.org/obo/UBERON_0000922"},{"id":"T260","span":{"begin":587,"end":588},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T261","span":{"begin":642,"end":649},"obj":"http://purl.obolibrary.org/obo/UBERON_0000922"},{"id":"T262","span":{"begin":683,"end":690},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T263","span":{"begin":734,"end":739},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T264","span":{"begin":774,"end":776},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T265","span":{"begin":787,"end":793},"obj":"http://purl.obolibrary.org/obo/UBERON_0000922"},{"id":"T266","span":{"begin":853,"end":854},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T267","span":{"begin":911,"end":913},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T268","span":{"begin":924,"end":931},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T269","span":{"begin":1034,"end":1036},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T270","span":{"begin":1047,"end":1054},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9031"},{"id":"T271","span":{"begin":1326,"end":1328},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T272","span":{"begin":1355,"end":1364},"obj":"http://www.ebi.ac.uk/efo/EFO_0000876"},{"id":"T273","span":{"begin":1414,"end":1415},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T274","span":{"begin":1478,"end":1479},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T275","span":{"begin":1604,"end":1609},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T276","span":{"begin":1691,"end":1693},"obj":"http://purl.obolibrary.org/obo/CLO_0050510"},{"id":"T277","span":{"begin":1699,"end":1701},"obj":"http://purl.obolibrary.org/obo/CLO_0001313"},{"id":"T278","span":{"begin":1703,"end":1705},"obj":"http://purl.obolibrary.org/obo/CLO_0001382"},{"id":"T279","span":{"begin":1818,"end":1819},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T280","span":{"begin":1849,"end":1851},"obj":"http://purl.obolibrary.org/obo/CLO_0001313"},{"id":"T281","span":{"begin":1911,"end":1913},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"}],"attributes":[{"subj":"T250","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T251","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T252","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T253","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T254","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T255","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T256","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T257","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T258","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T259","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T260","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T261","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T262","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T263","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T264","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T265","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T266","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T267","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T268","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T269","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T270","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T271","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T272","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T273","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T274","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T275","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T276","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T277","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T278","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T279","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T280","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T281","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T56","span":{"begin":151,"end":156},"obj":"Chemical"},{"id":"T57","span":{"begin":565,"end":568},"obj":"Chemical"},{"id":"T58","span":{"begin":679,"end":682},"obj":"Chemical"},{"id":"T59","span":{"begin":700,"end":705},"obj":"Chemical"},{"id":"T60","span":{"begin":920,"end":923},"obj":"Chemical"},{"id":"T61","span":{"begin":1043,"end":1046},"obj":"Chemical"},{"id":"T62","span":{"begin":1130,"end":1132},"obj":"Chemical"},{"id":"T63","span":{"begin":1310,"end":1315},"obj":"Chemical"},{"id":"T64","span":{"begin":1332,"end":1337},"obj":"Chemical"},{"id":"T65","span":{"begin":1638,"end":1643},"obj":"Chemical"}],"attributes":[{"id":"A56","pred":"chebi_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A57","pred":"chebi_id","subj":"T57","obj":"http://purl.obolibrary.org/obo/CHEBI_88542"},{"id":"A58","pred":"chebi_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/CHEBI_88542"},{"id":"A59","pred":"chebi_id","subj":"T59","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A60","pred":"chebi_id","subj":"T60","obj":"http://purl.obolibrary.org/obo/CHEBI_88542"},{"id":"A61","pred":"chebi_id","subj":"T61","obj":"http://purl.obolibrary.org/obo/CHEBI_88542"},{"id":"A62","pred":"chebi_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/CHEBI_74807"},{"id":"A63","pred":"chebi_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A64","pred":"chebi_id","subj":"T64","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A65","pred":"chebi_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"subj":"T56","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T57","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T58","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T59","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T60","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T61","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T62","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T63","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T65","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T27","span":{"begin":230,"end":236},"obj":"http://purl.obolibrary.org/obo/GO_0040007"},{"id":"T28","span":{"begin":969,"end":975},"obj":"http://purl.obolibrary.org/obo/GO_0040007"},{"id":"T29","span":{"begin":1527,"end":1533},"obj":"http://purl.obolibrary.org/obo/GO_0040007"},{"id":"T30","span":{"begin":1775,"end":1781},"obj":"http://purl.obolibrary.org/obo/GO_0040007"}],"attributes":[{"subj":"T27","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T29","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T30","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T134","span":{"begin":0,"end":47},"obj":"Sentence"},{"id":"T135","span":{"begin":48,"end":281},"obj":"Sentence"},{"id":"T136","span":{"begin":282,"end":356},"obj":"Sentence"},{"id":"T137","span":{"begin":357,"end":510},"obj":"Sentence"},{"id":"T138","span":{"begin":511,"end":650},"obj":"Sentence"},{"id":"T139","span":{"begin":651,"end":780},"obj":"Sentence"},{"id":"T140","span":{"begin":781,"end":1072},"obj":"Sentence"},{"id":"T141","span":{"begin":1073,"end":1134},"obj":"Sentence"},{"id":"T142","span":{"begin":1135,"end":1183},"obj":"Sentence"},{"id":"T143","span":{"begin":1184,"end":1234},"obj":"Sentence"},{"id":"T144","span":{"begin":1235,"end":1522},"obj":"Sentence"},{"id":"T145","span":{"begin":1523,"end":1644},"obj":"Sentence"},{"id":"T146","span":{"begin":1645,"end":1770},"obj":"Sentence"},{"id":"T147","span":{"begin":1771,"end":2025},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T134","pred":"source","obj":"LitCovid-sentences"},{"subj":"T135","pred":"source","obj":"LitCovid-sentences"},{"subj":"T136","pred":"source","obj":"LitCovid-sentences"},{"subj":"T137","pred":"source","obj":"LitCovid-sentences"},{"subj":"T138","pred":"source","obj":"LitCovid-sentences"},{"subj":"T139","pred":"source","obj":"LitCovid-sentences"},{"subj":"T140","pred":"source","obj":"LitCovid-sentences"},{"subj":"T141","pred":"source","obj":"LitCovid-sentences"},{"subj":"T142","pred":"source","obj":"LitCovid-sentences"},{"subj":"T143","pred":"source","obj":"LitCovid-sentences"},{"subj":"T144","pred":"source","obj":"LitCovid-sentences"},{"subj":"T145","pred":"source","obj":"LitCovid-sentences"},{"subj":"T146","pred":"source","obj":"LitCovid-sentences"},{"subj":"T147","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"272","span":{"begin":569,"end":576},"obj":"Species"},{"id":"273","span":{"begin":636,"end":641},"obj":"Species"},{"id":"274","span":{"begin":683,"end":690},"obj":"Species"},{"id":"275","span":{"begin":781,"end":786},"obj":"Species"},{"id":"276","span":{"begin":924,"end":931},"obj":"Species"},{"id":"277","span":{"begin":1047,"end":1054},"obj":"Species"},{"id":"278","span":{"begin":1304,"end":1309},"obj":"Chemical"},{"id":"279","span":{"begin":1320,"end":1325},"obj":"Chemical"},{"id":"280","span":{"begin":1329,"end":1331},"obj":"Chemical"},{"id":"281","span":{"begin":627,"end":635},"obj":"Disease"},{"id":"284","span":{"begin":127,"end":132},"obj":"Species"},{"id":"285","span":{"begin":250,"end":255},"obj":"Disease"},{"id":"287","span":{"begin":1863,"end":1872},"obj":"Disease"}],"attributes":[{"id":"A272","pred":"tao:has_database_id","subj":"272","obj":"Tax:9031"},{"id":"A273","pred":"tao:has_database_id","subj":"273","obj":"Tax:9031"},{"id":"A274","pred":"tao:has_database_id","subj":"274","obj":"Tax:9031"},{"id":"A275","pred":"tao:has_database_id","subj":"275","obj":"Tax:9031"},{"id":"A276","pred":"tao:has_database_id","subj":"276","obj":"Tax:9031"},{"id":"A277","pred":"tao:has_database_id","subj":"277","obj":"Tax:9031"},{"id":"A281","pred":"tao:has_database_id","subj":"281","obj":"MESH:D007239"},{"id":"A284","pred":"tao:has_database_id","subj":"284","obj":"Tax:9031"},{"id":"A285","pred":"tao:has_database_id","subj":"285","obj":"MESH:D003643"},{"id":"A287","pred":"tao:has_database_id","subj":"287","obj":"MESH:D007239"},{"subj":"272","pred":"source","obj":"LitCovid-PubTator"},{"subj":"273","pred":"source","obj":"LitCovid-PubTator"},{"subj":"274","pred":"source","obj":"LitCovid-PubTator"},{"subj":"275","pred":"source","obj":"LitCovid-PubTator"},{"subj":"276","pred":"source","obj":"LitCovid-PubTator"},{"subj":"277","pred":"source","obj":"LitCovid-PubTator"},{"subj":"278","pred":"source","obj":"LitCovid-PubTator"},{"subj":"279","pred":"source","obj":"LitCovid-PubTator"},{"subj":"280","pred":"source","obj":"LitCovid-PubTator"},{"subj":"281","pred":"source","obj":"LitCovid-PubTator"},{"subj":"284","pred":"source","obj":"LitCovid-PubTator"},{"subj":"285","pred":"source","obj":"LitCovid-PubTator"},{"subj":"287","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#a493ec","default":true},{"id":"LitCovid-PD-UBERON","color":"#9bec93"},{"id":"LitCovid-PD-MONDO","color":"#ec93b5"},{"id":"LitCovid-PD-CLO","color":"#93cfec"},{"id":"LitCovid-PD-CHEBI","color":"#e9ec93"},{"id":"LitCovid-PD-GO-BP","color":"#d493ec"},{"id":"LitCovid-sentences","color":"#93ecba"},{"id":"LitCovid-PubTator","color":"#eca093"}]}]}}