PMC:7113610 / 9956-10982 JSON TXT

Annnotations TAB JSON ListView MergeView

Id	Subject	Object	Predicate	Lexical cue	tao:has_database_id
357	44-48	Gene	denotes	ORF1	Gene:55354
358	689-710	Gene	denotes	trypsin-like protease	Gene:11012
359	712-715	Gene	denotes	HAT	Gene:9407
360	733-764	Gene	denotes	transmembrane protease serine 2	Gene:7113
361	766-773	Gene	denotes	TMPRSS2	Gene:7113
362	790-795	Gene	denotes	spike	Gene:43740568
363	883-905	Gene	denotes	dipeptidyl peptidase 4	Gene:1803
364	907-911	Gene	denotes	DPP4	Gene:1803
365	959-990	Gene	denotes	angiotensin-converting enzyme 2	Gene:59272
366	992-996	Gene	denotes	ACE2	Gene:59272
367	112-124	Gene	denotes	nucleocapsid	Gene:43740575
368	4-17	Species	denotes	coronaviruses	Tax:11118
369	200-213	Species	denotes	coronaviruses	Tax:11118
370	428-441	Species	denotes	coronaviruses	Tax:11118
371	523-528	Species	denotes	human	Tax:9606
372	541-549	Species	denotes	SARS-CoV	Tax:694009
373	554-562	Species	denotes	MERS-CoV	Tax:1335626
374	617-628	Species	denotes	coronavirus	Tax:11118
375	676-681	Species	denotes	human	Tax:9606
376	858-874	Species	denotes	MERS-coronavirus	Tax:1335626
377	920-929	Species	denotes	HCoV-NL63	Tax:277944
378	934-950	Species	denotes	SARS-coronavirus	Tax:694009
379	478-491	Chemical	denotes	carbohydrates	MESH:D002241

Id	Subject	Object	Predicate	Lexical cue	fma_id
T15	80-88	Body_part	denotes	proteins	http://purl.org/sig/ont/fma/fma67257
T16	156-168	Body_part	denotes	glycoprotein	http://purl.org/sig/ont/fma/fma62925
T17	280-285	Body_part	denotes	cells	http://purl.org/sig/ont/fma/fma68646
T18	478-491	Body_part	denotes	carbohydrates	http://purl.org/sig/ont/fma/fma82737
T19	529-534	Body_part	denotes	cells	http://purl.org/sig/ont/fma/fma68646
T20	756-762	Body_part	denotes	serine	http://purl.org/sig/ont/fma/fma82764
T21	796-803	Body_part	denotes	protein	http://purl.org/sig/ont/fma/fma67257

Id	Subject	Object	Predicate	Lexical cue	mondo_id
T100	541-549	Disease	denotes	SARS-CoV	http://purl.obolibrary.org/obo/MONDO_0005091
T101	541-545	Disease	denotes	SARS	http://purl.obolibrary.org/obo/MONDO_0005091
T102	712-715	Disease	denotes	HAT	http://purl.obolibrary.org/obo/MONDO_0018048
T103	934-950	Disease	denotes	SARS-coronavirus	http://purl.obolibrary.org/obo/MONDO_0005091
T104	934-938	Disease	denotes	SARS	http://purl.obolibrary.org/obo/MONDO_0005091

Id	Subject	Object	Predicate	Lexical cue
T102	35-40	http://purl.obolibrary.org/obo/OGG_0000000002	denotes	genes
T103	266-271	http://purl.obolibrary.org/obo/NCBITaxon_10239	denotes	virus
T104	280-285	http://purl.obolibrary.org/obo/GO_0005623	denotes	cells
T105	356-361	http://purl.obolibrary.org/obo/NCBITaxon_10239	denotes	virus
T106	378-383	http://purl.obolibrary.org/obo/NCBITaxon_10239	denotes	virus
T107	417-419	http://purl.obolibrary.org/obo/CLO_0050509	denotes	27
T108	495-496	http://purl.obolibrary.org/obo/CLO_0001020	denotes	a
T109	523-534	http://purl.obolibrary.org/obo/CLO_0053065	denotes	human cells
T110	615-616	http://purl.obolibrary.org/obo/CLO_0001020	denotes	a
T111	676-681	http://purl.obolibrary.org/obo/NCBITaxon_9606	denotes	human
T112	682-688	http://purl.obolibrary.org/obo/UBERON_0001005	denotes	airway
T113	1001-1002	http://purl.obolibrary.org/obo/CLO_0001020	denotes	a

Id	Subject	Object	Predicate	Lexical cue	chebi_id
T18	80-88	Chemical	denotes	proteins	http://purl.obolibrary.org/obo/CHEBI_36080
T19	156-168	Chemical	denotes	glycoprotein	http://purl.obolibrary.org/obo/CHEBI_17089
T20	478-491	Chemical	denotes	carbohydrates	http://purl.obolibrary.org/obo/CHEBI_16646
T21	756-762	Chemical	denotes	serine	http://purl.obolibrary.org/obo/CHEBI_17822
T22	796-803	Chemical	denotes	protein	http://purl.obolibrary.org/obo/CHEBI_36080
T23	959-970	Chemical	denotes	angiotensin	http://purl.obolibrary.org/obo/CHEBI_48433

Id	Subject	Object	Predicate	Lexical cue
T6	93-110	http://purl.obolibrary.org/obo/GO_0019079	denotes	viral replication
T7	93-110	http://purl.obolibrary.org/obo/GO_0019058	denotes	viral replication
T8	136-145	http://purl.obolibrary.org/obo/GO_0009058	denotes	formation

Id	Subject	Object	Predicate	Lexical cue
T80	0-151	Sentence	denotes	All coronaviruses contain specific genes in ORF1 downstream regions that encode proteins for viral replication, nucleocapsid and spikes formation [25].
T81	152-295	Sentence	denotes	The glycoprotein spikes on the outer surface of coronaviruses are responsible for the attachment and entry of the virus to host cells (Fig. 1).
T82	296-421	Sentence	denotes	The receptor-binding domain (RBD) is loosely attached among virus, therefore, the virus may infect multiple hosts [26], [27].
T83	422-591	Sentence	denotes	Other coronaviruses mostly recognize aminopeptidases or carbohydrates as a key receptor for entry to human cells while SARS-CoV and MERS-CoV recognize exopeptidases [2].
T84	592-857	Sentence	denotes	The entry mechanism of a coronavirus depends upon cellular proteases which include, human airway trypsin-like protease (HAT), cathepsins and transmembrane protease serine 2 (TMPRSS2) that split the spike protein and establish further penetration changes [28], [29].
T85	858-1026	Sentence	denotes	MERS-coronavirus employs dipeptidyl peptidase 4 (DPP4), while HCoV-NL63 and SARS-coronavirus require angiotensin-converting enzyme 2 (ACE2) as a key receptor [2], [26].

Id	Subject	Object	Predicate	Lexical cue
T249	4-17	NCBITaxon:11118	denotes	coronaviruses
T250	35-40	SO:0000704	denotes	genes
T251	93-98	NCBITaxon:10239;GO:0006260	denotes	viral
T252	99-110	GO:0006260	denotes	replication
T253	156-168	CHEBI:17089;BV_11;CHEBI:17089	denotes	glycoprotein
T254	189-196	GO:0009986	denotes	surface
T255	200-213	NCBITaxon:11118	denotes	coronaviruses
T256	266-271	NCBITaxon:10239	denotes	virus
T257	317-323	SO:0000417	denotes	domain
T258	356-361	NCBITaxon:10239	denotes	virus
T259	378-383	NCBITaxon:10239	denotes	virus
T260	428-441	NCBITaxon:11118	denotes	coronaviruses
T261	478-491	CHEBI:16646;CHEBI:16646	denotes	carbohydrates
T262	523-528	SP_6;NCBITaxon:9606	denotes	human
T263	541-549	SP_10	denotes	SARS-CoV
T264	554-562	SP_9	denotes	MERS-CoV
T265	617-628	NCBITaxon:11118	denotes	coronavirus
T266	676-681	SP_6;NCBITaxon:9606	denotes	human
T267	682-688	UBERON:0001005	denotes	airway
T268	689-696	PR:000016450	denotes	trypsin
T269	733-746	GO:0016020;PG_8	denotes	transmembrane
T270	747-764	PG_8	denotes	protease serine 2
T271	766-773	PR:000016456;G_2	denotes	TMPRSS2
T272	858-862	SP_9	denotes	MERS
T273	863-874	NCBITaxon:11118	denotes	coronavirus
T274	894-905	PR:000012546	denotes	peptidase 4
T275	907-911	PR:000001341;PG_7	denotes	DPP4
T276	934-938	SP_10	denotes	SARS
T277	939-950	NCBITaxon:11118	denotes	coronavirus
T278	959-990	PR:000003622;PG_10	denotes	angiotensin-converting enzyme 2
T279	992-996	PR:000003622;G_3;PG_10	denotes	ACE2

Id	Subject	Object	Predicate	Lexical cue
32257431-23170002-54950093	147-149	23170002	denotes	25
32257431-23486063-54950094	411-413	23486063	denotes	26
32257431-19430490-54950095	417-419	19430490	denotes	27
32257431-23835475-54950096	588-589	23835475	denotes	2
32257431-21325420-54950097	847-849	21325420	denotes	28
32257431-21994442-54950098	853-855	21994442	denotes	29
32257431-23835475-54950099	1017-1018	23835475	denotes	2
32257431-23486063-54950100	1022-1024	23486063	denotes	26