PMC:7113610 / 21445-22947
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 761 | 4-21 | Species | denotes | novel coronavirus | Tax:2697049 |
| 762 | 99-111 | Species | denotes | raccoon dogs | Tax:34880 |
| 763 | 217-227 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 764 | 396-404 | Species | denotes | SARS-CoV | Tax:694009 |
| 765 | 451-459 | Species | denotes | Beta CoV | Tax:694002 |
| 766 | 571-579 | Species | denotes | SARS-CoV | Tax:694009 |
| 767 | 607-611 | Species | denotes | CoVs | Tax:11118 |
| 768 | 710-715 | Species | denotes | human | Tax:9606 |
| 769 | 716-729 | Species | denotes | coronaviruses | Tax:11118 |
| 770 | 829-848 | Species | denotes | novel coronaviruses | Tax:2697049 |
| 771 | 933-946 | Species | denotes | coronaviruses | Tax:11118 |
| 772 | 1017-1025 | Species | denotes | patients | Tax:9606 |
| 773 | 1027-1031 | Species | denotes | mice | Tax:10090 |
| 774 | 1170-1178 | Species | denotes | patients | Tax:9606 |
| 775 | 1063-1073 | Chemical | denotes | Remdesivir | MESH:C000606551 |
| 776 | 1075-1084 | Chemical | denotes | Lopinavir | MESH:D061466 |
| 777 | 1086-1095 | Chemical | denotes | Ritonavir | MESH:D019438 |
| 778 | 1101-1112 | Chemical | denotes | Oseltamivir | MESH:D053139 |
| 779 | 198-206 | Disease | denotes | zoonotic | MESH:D015047 |
| 780 | 527-536 | Disease | denotes | infection | MESH:D007239 |
| 781 | 1008-1016 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 782 | 1139-1147 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 783 | 1148-1157 | Disease | denotes | infection | MESH:D007239 |
| 784 | 1161-1169 | Disease | denotes | infected | MESH:D007239 |
| 785 | 1369-1377 | Disease | denotes | infected | MESH:D007239 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T87 | 113-117 | Body_part | denotes | palm | http://purl.org/sig/ont/fma/fma24920 |
| T88 | 316-319 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
| T89 | 368-380 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T90 | 1247-1254 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T91 | 1345-1349 | Body_part | denotes | back | http://purl.org/sig/ont/fma/fma25056 |
LitCovid_AGAC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| p68811s16 | 1269-1277 | PosReg | denotes | enhanced |
| p68811s18 | 1282-1302 | MPA | denotes | transmission ability |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T228 | 217-225 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T229 | 217-221 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T230 | 396-404 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T231 | 396-400 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T232 | 527-536 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T233 | 571-579 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T234 | 571-575 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T235 | 593-597 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T236 | 908-917 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T237 | 919-923 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T238 | 1008-1016 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T239 | 1139-1147 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T240 | 1148-1157 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T197 | 85-89 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bats |
| T198 | 99-106 | http://purl.obolibrary.org/obo/NCBITaxon_9654 | denotes | raccoon |
| T199 | 136-143 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animals |
| T200 | 289-293 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bats |
| T201 | 603-606 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
| T202 | 710-715 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T203 | 1310-1315 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T204 | 1476-1481 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T77 | 316-319 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
| T78 | 368-380 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T79 | 873-883 | Chemical | denotes | antivirals | http://purl.obolibrary.org/obo/CHEBI_22587 |
| T80 | 1075-1084 | Chemical | denotes | Lopinavir | http://purl.obolibrary.org/obo/CHEBI_31781 |
| T81 | 1101-1112 | Chemical | denotes | Oseltamivir | http://purl.obolibrary.org/obo/CHEBI_7798 |
| T82 | 1247-1254 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T20 | 316-333 | http://purl.obolibrary.org/obo/GO_0006310 | denotes | DNA recombination |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T158 | 0-193 | Sentence | denotes | The novel coronavirus originated from the Hunan seafood market at Wuhan, China where bats, snakes, raccoon dogs, palm civets, and other animals are sold, and rapidly spread up to 109 countries. |
| T159 | 194-315 | Sentence | denotes | The zoonotic source of SARS-CoV-2 is not confirmed, however, sequence-based analysis suggested bats as the key reservoir. |
| T160 | 316-537 | Sentence | denotes | DNA recombination was found to be involved at spike glycoprotein which assorted SARS-CoV (CoVZXC21 or CoVZC45) with the RBD of another Beta CoV, thus could be the reason for cross-species transmission and rapid infection. |
| T161 | 538-612 | Sentence | denotes | According to phylogenetic trees, SARS-CoV is closer to SARS-like bat CoVs. |
| T162 | 613-730 | Sentence | denotes | Until now, no promising clinical treatments or prevention strategies have been developed against human coronaviruses. |
| T163 | 731-849 | Sentence | denotes | However, the researchers are working to develop efficient therapeutic strategies to cope with the novel coronaviruses. |
| T164 | 850-1062 | Sentence | denotes | Various broad-spectrum antivirals previously used against influenza, SARS and MERS coronaviruses have been evaluated either alone or in combinations to treat COVID-19 patients, mice models, and clinical isolates. |
| T165 | 1063-1179 | Sentence | denotes | Remdesivir, Lopinavir, Ritonavir, and Oseltamivir significantly blocked the COVID-19 infection in infected patients. |
| T166 | 1180-1316 | Sentence | denotes | It can be cocluded that the homologus recombination event at the S protein of RBD region enhanced the transmission ability of the virus. |
| T167 | 1317-1502 | Sentence | denotes | While the decision of bring back the nationals from infected area by various countries and poor screening of passengers, become the leading cause of spreading virus in others countries. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T603 | 10-21 | NCBITaxon:11118 | denotes | coronavirus |
| T604 | 85-89 | SP_2;NCBITaxon:9397 | denotes | bats |
| T605 | 91-97 | NCBITaxon:8570 | denotes | snakes |
| T606 | 99-106 | NCBITaxon:9654 | denotes | raccoon |
| T607 | 107-111 | NCBITaxon:9615 | denotes | dogs |
| T608 | 113-124 | SP_5 | denotes | palm civets |
| T609 | 136-143 | NCBITaxon:33208 | denotes | animals |
| T610 | 217-227 | SP_7 | denotes | SARS-CoV-2 |
| T611 | 289-293 | SP_2;NCBITaxon:9397 | denotes | bats |
| T612 | 362-367 | PG_18;PG_1 | denotes | spike |
| T613 | 368-380 | PG_18;PG_1;CHEBI:17089;BV_11;CHEBI:17089 | denotes | glycoprotein |
| T614 | 396-404 | SP_10 | denotes | SARS-CoV |
| T615 | 496-503 | NCBITaxon:species | denotes | species |
| T616 | 571-579 | SP_10 | denotes | SARS-CoV |
| T617 | 593-597 | SP_10 | denotes | SARS |
| T618 | 603-606 | SP_2 | denotes | bat |
| T619 | 710-715 | SP_6;NCBITaxon:9606 | denotes | human |
| T620 | 716-729 | NCBITaxon:11118 | denotes | coronaviruses |
| T621 | 835-848 | NCBITaxon:11118 | denotes | coronaviruses |
| T622 | 919-923 | SP_10 | denotes | SARS |
| T623 | 928-932 | SP_9 | denotes | MERS |
| T624 | 933-946 | NCBITaxon:11118 | denotes | coronaviruses |
| T625 | 1008-1016 | SP_7 | denotes | COVID-19 |
| T626 | 1027-1031 | NCBITaxon:10088 | denotes | mice |
| T627 | 1063-1073 | DG_28 | denotes | Remdesivir |
| T628 | 1075-1084 | DG_23 | denotes | Lopinavir |
| T629 | 1086-1095 | DG_30 | denotes | Ritonavir |
| T630 | 1139-1147 | SP_7 | denotes | COVID-19 |
| T631 | 1245-1254 | PG_1 | denotes | S protein |
| T632 | 1310-1315 | NCBITaxon:10239 | denotes | virus |
| T633 | 1476-1481 | NCBITaxon:10239 | denotes | virus |
| T178 | 933-946 | NCBITaxon:11118 | denotes | coronaviruses |
| T29118 | 10-21 | NCBITaxon:11118 | denotes | coronavirus |
| T44677 | 85-89 | SP_2;NCBITaxon:9397 | denotes | bats |
| T86599 | 91-97 | NCBITaxon:8570 | denotes | snakes |
| T83991 | 99-106 | NCBITaxon:9654 | denotes | raccoon |
| T59099 | 107-111 | NCBITaxon:9615 | denotes | dogs |
| T21619 | 113-124 | SP_5 | denotes | palm civets |
| T60847 | 136-143 | NCBITaxon:33208 | denotes | animals |
| T54579 | 217-227 | SP_7 | denotes | SARS-CoV-2 |
| T14735 | 289-293 | SP_2;NCBITaxon:9397 | denotes | bats |
| T62087 | 362-367 | PG_18;PG_1 | denotes | spike |
| T8377 | 368-380 | PG_18;PG_1;CHEBI:17089;BV_11;CHEBI:17089 | denotes | glycoprotein |
| T46318 | 396-404 | SP_10 | denotes | SARS-CoV |
| T92076 | 496-503 | NCBITaxon:species | denotes | species |
| T43925 | 571-579 | SP_10 | denotes | SARS-CoV |
| T42708 | 593-597 | SP_10 | denotes | SARS |
| T29611 | 603-606 | SP_2 | denotes | bat |
| T83153 | 710-715 | SP_6;NCBITaxon:9606 | denotes | human |
| T37205 | 716-729 | NCBITaxon:11118 | denotes | coronaviruses |
| T17840 | 835-848 | NCBITaxon:11118 | denotes | coronaviruses |
| T40268 | 919-923 | SP_10 | denotes | SARS |
| T44107 | 928-932 | SP_9 | denotes | MERS |
| T32313 | 933-946 | NCBITaxon:11118 | denotes | coronaviruses |
| T88236 | 1008-1016 | SP_7 | denotes | COVID-19 |
| T86052 | 1027-1031 | NCBITaxon:10088 | denotes | mice |
| T93029 | 1063-1073 | DG_28 | denotes | Remdesivir |
| T87590 | 1075-1084 | DG_23 | denotes | Lopinavir |
| T96267 | 1086-1095 | DG_30 | denotes | Ritonavir |
| T4310 | 1139-1147 | SP_7 | denotes | COVID-19 |
| T33947 | 1245-1254 | PG_1 | denotes | S protein |
| T90913 | 1310-1315 | NCBITaxon:10239 | denotes | virus |
| T1507 | 1476-1481 | NCBITaxon:10239 | denotes | virus |