PMC:7113610 / 15170-15672 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"467","span":{"begin":185,"end":204},"obj":"Species"},{"id":"468","span":{"begin":258,"end":303},"obj":"Species"},{"id":"469","span":{"begin":305,"end":314},"obj":"Species"},{"id":"470","span":{"begin":317,"end":342},"obj":"Species"},{"id":"471","span":{"begin":344,"end":354},"obj":"Species"},{"id":"472","span":{"begin":361,"end":417},"obj":"Species"},{"id":"473","span":{"begin":451,"end":455},"obj":"Species"},{"id":"476","span":{"begin":435,"end":443},"obj":"Disease"},{"id":"477","span":{"begin":479,"end":488},"obj":"Disease"}],"attributes":[{"id":"A467","pred":"tao:has_database_id","subj":"467","obj":"Tax:2697049"},{"id":"A468","pred":"tao:has_database_id","subj":"468","obj":"Tax:694009"},{"id":"A469","pred":"tao:has_database_id","subj":"469","obj":"Tax:694009"},{"id":"A470","pred":"tao:has_database_id","subj":"470","obj":"Tax:694009"},{"id":"A471","pred":"tao:has_database_id","subj":"471","obj":"Tax:694009"},{"id":"A472","pred":"tao:has_database_id","subj":"472","obj":"Tax:1335626"},{"id":"A473","pred":"tao:has_database_id","subj":"473","obj":"Tax:28295"},{"id":"A476","pred":"tao:has_database_id","subj":"476","obj":"MESH:D003967"},{"id":"A477","pred":"tao:has_database_id","subj":"477","obj":"MESH:D011014"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"This tree is based on the published trees of Coronavirinae [3], [41] and reconstructed with sequences of the complete RNA- dependent RNA polymerase- coding region of the representative novel coronaviruses (maximum likelihood method using MEGA 7.2 software). severe acute respiratory syndrome coronavirus (SARS- CoV); SARS- related coronavirus (SARSr- CoV); the Middle East respiratory syndrome coronavirus (MERS- CoV); porcine enteric diarrhea virus (PEDV); Wuhan seafood market pneumonia (Wuhan-Hu-1)."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T72","span":{"begin":118,"end":121},"obj":"Body_part"},{"id":"T73","span":{"begin":133,"end":136},"obj":"Body_part"}],"attributes":[{"id":"A72","pred":"fma_id","subj":"T72","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A73","pred":"fma_id","subj":"T73","obj":"http://purl.org/sig/ont/fma/fma67095"}],"text":"This tree is based on the published trees of Coronavirinae [3], [41] and reconstructed with sequences of the complete RNA- dependent RNA polymerase- coding region of the representative novel coronaviruses (maximum likelihood method using MEGA 7.2 software). severe acute respiratory syndrome coronavirus (SARS- CoV); SARS- related coronavirus (SARSr- CoV); the Middle East respiratory syndrome coronavirus (MERS- CoV); porcine enteric diarrhea virus (PEDV); Wuhan seafood market pneumonia (Wuhan-Hu-1)."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T155","span":{"begin":258,"end":291},"obj":"Disease"},{"id":"T156","span":{"begin":305,"end":309},"obj":"Disease"},{"id":"T157","span":{"begin":317,"end":321},"obj":"Disease"},{"id":"T158","span":{"begin":435,"end":443},"obj":"Disease"},{"id":"T159","span":{"begin":479,"end":488},"obj":"Disease"}],"attributes":[{"id":"A155","pred":"mondo_id","subj":"T155","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A156","pred":"mondo_id","subj":"T156","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A157","pred":"mondo_id","subj":"T157","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A158","pred":"mondo_id","subj":"T158","obj":"http://purl.obolibrary.org/obo/MONDO_0001673"},{"id":"A159","pred":"mondo_id","subj":"T159","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"}],"text":"This tree is based on the published trees of Coronavirinae [3], [41] and reconstructed with sequences of the complete RNA- dependent RNA polymerase- coding region of the representative novel coronaviruses (maximum likelihood method using MEGA 7.2 software). severe acute respiratory syndrome coronavirus (SARS- CoV); SARS- related coronavirus (SARSr- CoV); the Middle East respiratory syndrome coronavirus (MERS- CoV); porcine enteric diarrhea virus (PEDV); Wuhan seafood market pneumonia (Wuhan-Hu-1)."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T150","span":{"begin":65,"end":67},"obj":"http://purl.obolibrary.org/obo/CLO_0053794"},{"id":"T151","span":{"begin":444,"end":449},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"}],"text":"This tree is based on the published trees of Coronavirinae [3], [41] and reconstructed with sequences of the complete RNA- dependent RNA polymerase- coding region of the representative novel coronaviruses (maximum likelihood method using MEGA 7.2 software). severe acute respiratory syndrome coronavirus (SARS- CoV); SARS- related coronavirus (SARSr- CoV); the Middle East respiratory syndrome coronavirus (MERS- CoV); porcine enteric diarrhea virus (PEDV); Wuhan seafood market pneumonia (Wuhan-Hu-1)."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T58","span":{"begin":238,"end":242},"obj":"Chemical"}],"attributes":[{"id":"A58","pred":"chebi_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/CHEBI_6617"}],"text":"This tree is based on the published trees of Coronavirinae [3], [41] and reconstructed with sequences of the complete RNA- dependent RNA polymerase- coding region of the representative novel coronaviruses (maximum likelihood method using MEGA 7.2 software). severe acute respiratory syndrome coronavirus (SARS- CoV); SARS- related coronavirus (SARSr- CoV); the Middle East respiratory syndrome coronavirus (MERS- CoV); porcine enteric diarrhea virus (PEDV); Wuhan seafood market pneumonia (Wuhan-Hu-1)."}

{"project":"LitCovid-sentences","denotations":[{"id":"T115","span":{"begin":0,"end":502},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"This tree is based on the published trees of Coronavirinae [3], [41] and reconstructed with sequences of the complete RNA- dependent RNA polymerase- coding region of the representative novel coronaviruses (maximum likelihood method using MEGA 7.2 software). severe acute respiratory syndrome coronavirus (SARS- CoV); SARS- related coronavirus (SARSr- CoV); the Middle East respiratory syndrome coronavirus (MERS- CoV); porcine enteric diarrhea virus (PEDV); Wuhan seafood market pneumonia (Wuhan-Hu-1)."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T23","span":{"begin":435,"end":443},"obj":"Phenotype"},{"id":"T24","span":{"begin":479,"end":488},"obj":"Phenotype"}],"attributes":[{"id":"A23","pred":"hp_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/HP_0002014"},{"id":"A24","pred":"hp_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/HP_0002090"}],"text":"This tree is based on the published trees of Coronavirinae [3], [41] and reconstructed with sequences of the complete RNA- dependent RNA polymerase- coding region of the representative novel coronaviruses (maximum likelihood method using MEGA 7.2 software). severe acute respiratory syndrome coronavirus (SARS- CoV); SARS- related coronavirus (SARSr- CoV); the Middle East respiratory syndrome coronavirus (MERS- CoV); porcine enteric diarrhea virus (PEDV); Wuhan seafood market pneumonia (Wuhan-Hu-1)."}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T434","span":{"begin":45,"end":58},"obj":"NCBITaxon:11118"},{"id":"T435","span":{"begin":191,"end":204},"obj":"NCBITaxon:11118"},{"id":"T436","span":{"begin":258,"end":270},"obj":"SP_10"},{"id":"T437","span":{"begin":271,"end":282},"obj":"SP_10;UBERON:0001004"},{"id":"T438","span":{"begin":283,"end":303},"obj":"SP_10"},{"id":"T439","span":{"begin":305,"end":314},"obj":"SP_10"},{"id":"T440","span":{"begin":317,"end":321},"obj":"SP_10"},{"id":"T441","span":{"begin":331,"end":342},"obj":"NCBITaxon:11118"},{"id":"T442","span":{"begin":361,"end":372},"obj":"SP_9"},{"id":"T443","span":{"begin":373,"end":384},"obj":"SP_9;UBERON:0001004"},{"id":"T444","span":{"begin":385,"end":405},"obj":"SP_9"},{"id":"T445","span":{"begin":407,"end":416},"obj":"SP_9"},{"id":"T446","span":{"begin":444,"end":449},"obj":"NCBITaxon:10239"}],"text":"This tree is based on the published trees of Coronavirinae [3], [41] and reconstructed with sequences of the complete RNA- dependent RNA polymerase- coding region of the representative novel coronaviruses (maximum likelihood method using MEGA 7.2 software). severe acute respiratory syndrome coronavirus (SARS- CoV); SARS- related coronavirus (SARSr- CoV); the Middle East respiratory syndrome coronavirus (MERS- CoV); porcine enteric diarrhea virus (PEDV); Wuhan seafood market pneumonia (Wuhan-Hu-1)."}

{"project":"2_test","denotations":[{"id":"32257431-30531947-54950103","span":{"begin":60,"end":61},"obj":"30531947"},{"id":"32257431-25031349-54950104","span":{"begin":65,"end":67},"obj":"25031349"}],"text":"This tree is based on the published trees of Coronavirinae [3], [41] and reconstructed with sequences of the complete RNA- dependent RNA polymerase- coding region of the representative novel coronaviruses (maximum likelihood method using MEGA 7.2 software). severe acute respiratory syndrome coronavirus (SARS- CoV); SARS- related coronavirus (SARSr- CoV); the Middle East respiratory syndrome coronavirus (MERS- CoV); porcine enteric diarrhea virus (PEDV); Wuhan seafood market pneumonia (Wuhan-Hu-1)."}