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PMC:7113610 / 14562-15737 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
462 21-34 Species denotes coronaviruses Tax:11118
463 91-101 Species denotes SARS-CoV-2 Tax:2697049
464 250-261 Species denotes coronavirus Tax:11118
465 408-423 Species denotes Betacoronavirus Tax:694002
466 591-606 Species denotes Betacoronavirus Tax:694002
467 793-812 Species denotes novel coronaviruses Tax:2697049
468 866-911 Species denotes severe acute respiratory syndrome coronavirus Tax:694009
469 913-922 Species denotes SARS- CoV Tax:694009
470 925-950 Species denotes SARS- related coronavirus Tax:694009
471 952-962 Species denotes SARSr- CoV Tax:694009
472 969-1025 Species denotes Middle East respiratory syndrome coronavirus (MERS- CoV) Tax:1335626
473 1059-1063 Species denotes PEDV Tax:28295
474 1115-1118 Species denotes CoV Tax:11118
475 1159-1169 Species denotes SARS-CoV-2 Tax:2697049
476 1043-1051 Disease denotes diarrhea MESH:D003967
477 1087-1096 Disease denotes pneumonia MESH:D011014

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T70 274-284 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T71 311-317 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T72 726-729 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T73 741-744 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T153 91-99 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T154 91-95 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T155 866-899 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T156 913-917 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T157 925-929 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T158 1043-1051 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T159 1087-1096 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T160 1159-1167 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T161 1159-1163 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T146 134-135 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T147 323-330 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T148 514-521 http://purl.obolibrary.org/obo/CLO_0007225 denotes labeled
T149 564-566 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2a
T150 673-675 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T151 1052-1057 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T57 274-284 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T58 846-850 Chemical denotes MEGA http://purl.obolibrary.org/obo/CHEBI_6617

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T112 319-378 Sentence denotes The viruses are grouped into four genera (prototype shown):
T113 379-491 Sentence denotes Alphacoronavirus (sky blue), Betacoronavirus (pink), Gammacoronavirus (green) and Deltacoronavirus (light blue).
T114 492-607 Sentence denotes Subgroup clusters are labeled as 1a and 1b for the Alphacoronavirus and 2a, 2b, 2c, and 2d for the Betacoronavirus.
T115 608-1110 Sentence denotes This tree is based on the published trees of Coronavirinae [3], [41] and reconstructed with sequences of the complete RNA- dependent RNA polymerase- coding region of the representative novel coronaviruses (maximum likelihood method using MEGA 7.2 software). severe acute respiratory syndrome coronavirus (SARS- CoV); SARS- related coronavirus (SARSr- CoV); the Middle East respiratory syndrome coronavirus (MERS- CoV); porcine enteric diarrhea virus (PEDV); Wuhan seafood market pneumonia (Wuhan-Hu-1).
T116 1111-1175 Sentence denotes Bat CoV RaTG13 Showed high sequence identity to SARS-CoV-2 [42].

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T23 1043-1051 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T24 1087-1096 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T423 21-34 NCBITaxon:11118 denotes coronaviruses
T424 91-101 SP_7 denotes SARS-CoV-2
T425 250-261 NCBITaxon:11118 denotes coronavirus
T426 311-317 SO:0001026 denotes genome
T427 323-330 NCBITaxon:10239 denotes viruses
T428 379-395 NCBITaxon:7656 denotes Alphacoronavirus
T429 408-423 SP_8;NCBITaxon:694002 denotes Betacoronavirus
T430 432-448 NCBITaxon:99883 denotes Gammacoronavirus
T431 461-477 NCBITaxon:1159901 denotes Deltacoronavirus
T432 543-559 NCBITaxon:7656 denotes Alphacoronavirus
T433 591-606 SP_8;NCBITaxon:694002 denotes Betacoronavirus
T434 653-666 NCBITaxon:11118 denotes Coronavirinae
T435 799-812 NCBITaxon:11118 denotes coronaviruses
T436 866-878 SP_10 denotes severe acute
T437 879-890 SP_10;UBERON:0001004 denotes respiratory
T438 891-911 SP_10 denotes syndrome coronavirus
T439 913-922 SP_10 denotes SARS- CoV
T440 925-929 SP_10 denotes SARS
T441 939-950 NCBITaxon:11118 denotes coronavirus
T442 969-980 SP_9 denotes Middle East
T443 981-992 SP_9;UBERON:0001004 denotes respiratory
T444 993-1013 SP_9 denotes syndrome coronavirus
T445 1015-1024 SP_9 denotes MERS- CoV
T446 1052-1057 NCBITaxon:10239 denotes virus
T447 1159-1169 SP_7 denotes SARS-CoV-2

2_test

Id Subject Object Predicate Lexical cue
32257431-30531947-54950103 668-669 30531947 denotes 3
32257431-25031349-54950104 673-675 25031349 denotes 41