PMC:7111504 / 19593-19880 JSONTXT

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T208","span":{"begin":32,"end":46},"obj":"BV_15"},{"id":"T209","span":{"begin":280,"end":286},"obj":"CL:0000084"},{"id":"T6685","span":{"begin":32,"end":46},"obj":"BV_15"},{"id":"T44475","span":{"begin":280,"end":286},"obj":"CL:0000084"}],"text":"We have used iPred 5 to predict immunogenicity of each given peptide. Briefly, iPred employs peptides’ length and physicochemical properties of amino acids modelled by sums of ten Kidera factors and associates a score to each peptide reflecting its likelihood of recognition by a T cell."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T99","span":{"begin":144,"end":155},"obj":"Body_part"},{"id":"T100","span":{"begin":282,"end":286},"obj":"Body_part"}],"attributes":[{"id":"A99","pred":"fma_id","subj":"T99","obj":"http://purl.org/sig/ont/fma/fma82739"},{"id":"A100","pred":"fma_id","subj":"T100","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"We have used iPred 5 to predict immunogenicity of each given peptide. Briefly, iPred employs peptides’ length and physicochemical properties of amino acids modelled by sums of ten Kidera factors and associates a score to each peptide reflecting its likelihood of recognition by a T cell."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T233","span":{"begin":61,"end":68},"obj":"http://purl.obolibrary.org/obo/PR_000018263"},{"id":"T234","span":{"begin":93,"end":101},"obj":"http://purl.obolibrary.org/obo/PR_000018263"},{"id":"T235","span":{"begin":176,"end":179},"obj":"http://purl.obolibrary.org/obo/CLO_0050884"},{"id":"T236","span":{"begin":210,"end":211},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T237","span":{"begin":226,"end":233},"obj":"http://purl.obolibrary.org/obo/PR_000018263"},{"id":"T238","span":{"begin":278,"end":279},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T239","span":{"begin":280,"end":286},"obj":"http://purl.obolibrary.org/obo/CL_0000084"}],"text":"We have used iPred 5 to predict immunogenicity of each given peptide. Briefly, iPred employs peptides’ length and physicochemical properties of amino acids modelled by sums of ten Kidera factors and associates a score to each peptide reflecting its likelihood of recognition by a T cell."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T133","span":{"begin":61,"end":68},"obj":"Chemical"},{"id":"T134","span":{"begin":93,"end":101},"obj":"Chemical"},{"id":"T135","span":{"begin":144,"end":155},"obj":"Chemical"},{"id":"T136","span":{"begin":144,"end":149},"obj":"Chemical"},{"id":"T137","span":{"begin":150,"end":155},"obj":"Chemical"},{"id":"T138","span":{"begin":226,"end":233},"obj":"Chemical"}],"attributes":[{"id":"A133","pred":"chebi_id","subj":"T133","obj":"http://purl.obolibrary.org/obo/CHEBI_16670"},{"id":"A134","pred":"chebi_id","subj":"T134","obj":"http://purl.obolibrary.org/obo/CHEBI_16670"},{"id":"A135","pred":"chebi_id","subj":"T135","obj":"http://purl.obolibrary.org/obo/CHEBI_33709"},{"id":"A136","pred":"chebi_id","subj":"T136","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A137","pred":"chebi_id","subj":"T137","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"id":"A138","pred":"chebi_id","subj":"T138","obj":"http://purl.obolibrary.org/obo/CHEBI_16670"}],"text":"We have used iPred 5 to predict immunogenicity of each given peptide. Briefly, iPred employs peptides’ length and physicochemical properties of amino acids modelled by sums of ten Kidera factors and associates a score to each peptide reflecting its likelihood of recognition by a T cell."}

{"project":"LitCovid-sentences","denotations":[{"id":"T210","span":{"begin":0,"end":69},"obj":"Sentence"},{"id":"T211","span":{"begin":70,"end":287},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"We have used iPred 5 to predict immunogenicity of each given peptide. Briefly, iPred employs peptides’ length and physicochemical properties of amino acids modelled by sums of ten Kidera factors and associates a score to each peptide reflecting its likelihood of recognition by a T cell."}

{"project":"MyTest","denotations":[{"id":"32269766-30144804-30420976","span":{"begin":19,"end":21},"obj":"30144804"}],"namespaces":[{"prefix":"_base","uri":"https://www.uniprot.org/uniprot/testbase"},{"prefix":"UniProtKB","uri":"https://www.uniprot.org/uniprot/"},{"prefix":"uniprot","uri":"https://www.uniprot.org/uniprotkb/"}],"text":"We have used iPred 5 to predict immunogenicity of each given peptide. Briefly, iPred employs peptides’ length and physicochemical properties of amino acids modelled by sums of ten Kidera factors and associates a score to each peptide reflecting its likelihood of recognition by a T cell."}

{"project":"2_test","denotations":[{"id":"32269766-30144804-30420976","span":{"begin":19,"end":20},"obj":"30144804"}],"text":"We have used iPred 5 to predict immunogenicity of each given peptide. Briefly, iPred employs peptides’ length and physicochemical properties of amino acids modelled by sums of ten Kidera factors and associates a score to each peptide reflecting its likelihood of recognition by a T cell."}