PMC:7111504 / 19034-19255 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"287","span":{"begin":32,"end":41},"obj":"Species"}],"attributes":[{"id":"A287","pred":"tao:has_database_id","subj":"287","obj":"Tax:2697049"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"The sequence similarity between 2019-nCoV open reading frames and previously characterized immunogenic peptides in IEDB was analysed by local alignment using R ‘pairwiseAlignment’ function from Biostrings v2.40.2 package."}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T203","span":{"begin":32,"end":41},"obj":"SP_7"},{"id":"T204","span":{"begin":42,"end":61},"obj":"SO:0000236"},{"id":"T205","span":{"begin":91,"end":102},"obj":"CHEBI:60816;CHEBI:60816"},{"id":"T9165","span":{"begin":32,"end":41},"obj":"SP_7"},{"id":"T61515","span":{"begin":42,"end":61},"obj":"SO:0000236"},{"id":"T95930","span":{"begin":91,"end":102},"obj":"CHEBI:60816;CHEBI:60816"}],"text":"The sequence similarity between 2019-nCoV open reading frames and previously characterized immunogenic peptides in IEDB was analysed by local alignment using R ‘pairwiseAlignment’ function from Biostrings v2.40.2 package."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T229","span":{"begin":103,"end":111},"obj":"http://purl.obolibrary.org/obo/PR_000018263"}],"text":"The sequence similarity between 2019-nCoV open reading frames and previously characterized immunogenic peptides in IEDB was analysed by local alignment using R ‘pairwiseAlignment’ function from Biostrings v2.40.2 package."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T125","span":{"begin":103,"end":111},"obj":"Chemical"}],"attributes":[{"id":"A125","pred":"chebi_id","subj":"T125","obj":"http://purl.obolibrary.org/obo/CHEBI_16670"}],"text":"The sequence similarity between 2019-nCoV open reading frames and previously characterized immunogenic peptides in IEDB was analysed by local alignment using R ‘pairwiseAlignment’ function from Biostrings v2.40.2 package."}

{"project":"LitCovid-sentences","denotations":[{"id":"T205","span":{"begin":0,"end":221},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The sequence similarity between 2019-nCoV open reading frames and previously characterized immunogenic peptides in IEDB was analysed by local alignment using R ‘pairwiseAlignment’ function from Biostrings v2.40.2 package."}