PMC:7111504 / 14059-14230
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 221 | 118-123 | Gene | denotes | HLA-A | Gene:3105 |
| 222 | 58-61 | Gene | denotes | TCR | Gene:6962 |
| 223 | 0-9 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 224 | 133-142 | Chemical | denotes | NetMHCpan | |
| 225 | 155-164 | Chemical | denotes | NetMHCpan |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T168 | 0-9 | SP_7 | denotes | 2019-nCoV |
| T169 | 118-123 | PR:000002009 | denotes | HLA-A |
| T241 | 0-9 | SP_7 | denotes | 2019-nCoV |
| T1071 | 118-123 | PR:000002009 | denotes | HLA-A |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T84 | 118-121 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T193 | 16-24 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T194 | 122-123 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T97 | 16-24 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T157 | 0-171 | Sentence | denotes | 2019-nCoV 9-mer peptides with geometric mean ≥ 0.7 by 1G4 TCR positional weight matrix and predicted positive to bind HLA-A*02:01 by NetMHCpan 4.0 (Rank = NetMHCpan rank). |