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PMC:7111504 / 12684-13141 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
192 208-211 Gene denotes CD8 Gene:925
193 283-288 Gene denotes HLA-A Gene:3105
194 428-431 Gene denotes TCR Gene:6962
195 213-216 Gene denotes TCR Gene:6962
196 439-448 Species denotes 2019-nCoV Tax:2697049
197 83-88 Disease denotes tumor MESH:D009369

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T153 0-6 CL:0000084 denotes T cell
T154 54-60 CL:0000084 denotes T cell
T155 89-97 CHEBI:59132;CHEBI:59132 denotes antigens
T156 150-157 CL:0000084 denotes T cells
T157 283-288 PR:000002009 denotes HLA-A
T158 439-448 SP_7 denotes 2019-nCoV
T69209 0-6 CL:0000084 denotes T cell
T36975 54-60 CL:0000084 denotes T cell
T33303 89-97 CHEBI:59132;CHEBI:59132 denotes antigens
T36223 150-157 CL:0000084 denotes T cells
T80986 283-288 PR:000002009 denotes HLA-A
T35114 439-448 SP_7 denotes 2019-nCoV

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T79 2-6 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T80 56-60 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T81 152-157 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T82 283-286 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T19 83-88 Disease denotes tumor http://purl.obolibrary.org/obo/MONDO_0005070

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T171 0-6 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T172 24-27 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T173 33-45 http://purl.obolibrary.org/obo/OBI_0000968 denotes instrumental
T174 54-60 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T175 138-139 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T176 150-157 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T177 208-211 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T178 262-269 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T179 287-288 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T180 343-344 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T181 449-456 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T88 89-97 Chemical denotes antigens http://purl.obolibrary.org/obo/CHEBI_59132
T89 262-269 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T90 449-456 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 83-88 Phenotype denotes tumor http://purl.obolibrary.org/obo/HP_0002664

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T146 0-121 Sentence denotes T cell cross-reactivity has been instrumental for the T cell immunity against both tumor antigens and external pathogens.
T147 122-295 Sentence denotes In that regard, a number of T cells have been extensively characterized including 1G4 CD8+ TCR, which is known to recognize the ‘SLLMWITQC’ peptide presented by HLA-A*02:01.
T148 296-457 Sentence denotes We therefore set out to leverage the data from a recently published study 7 and exploit the possibility of cross reactivity of this TCR to any 2019-nCoV peptide.

MyTest

Id Subject Object Predicate Lexical cue
32269766-31695703-30420973 370-372 31695703 denotes 7

2_test

Id Subject Object Predicate Lexical cue
32269766-31695703-30420973 370-371 31695703 denotes 7