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PMC:7111504 / 12085-12359 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
162 59-62 Gene denotes MHC Gene:3107
163 35-44 Species denotes 2019-nCoV Tax:2697049
171 110-113 Gene denotes MHC Gene:3107
172 140-145 Gene denotes HLA-A Gene:3105
173 153-158 Gene denotes HLA-A Gene:3105
174 166-171 Gene denotes HLA-B Gene:3106
175 179-184 Gene denotes HLA-B Gene:3106
176 195-200 Gene denotes HLA-C Gene:3107
177 218-227 Chemical denotes NetMHCpan

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T138 35-44 SP_7 denotes 2019-nCoV
T139 59-62 GO:0042611 denotes MHC
T140 80-94 BV_15 denotes immunogenicity
T141 110-113 GO:0042611 denotes MHC
T142 140-145 PR:000002009 denotes HLA-A
T143 153-158 PR:000002009 denotes HLA-A
T144 166-171 PR:000002010 denotes HLA-B
T145 179-184 PR:000002010 denotes HLA-B
T146 195-200 PR:000002011 denotes HLA-C
T147 207-214 SO:0001023 denotes alleles
T148 236-250 BV_15 denotes immunogenicity
T12377 35-44 SP_7 denotes 2019-nCoV
T98397 59-62 GO:0042611 denotes MHC
T94145 80-94 BV_15 denotes immunogenicity
T75496 110-113 GO:0042611 denotes MHC
T7224 140-145 PR:000002009 denotes HLA-A
T38753 153-158 PR:000002009 denotes HLA-A
T92877 166-171 PR:000002010 denotes HLA-B
T36156 179-184 PR:000002010 denotes HLA-B
T68789 195-200 PR:000002011 denotes HLA-C
T46318 207-214 SO:0001023 denotes alleles
T4457 236-250 BV_15 denotes immunogenicity

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T71 59-62 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T72 110-113 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T73 140-143 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T74 153-156 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T75 166-169 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T76 179-182 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T77 195-198 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T163 45-53 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T164 144-145 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T165 157-158 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T166 170-171 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T167 183-184 http://purl.obolibrary.org/obo/CLO_0001021 denotes B

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T85 45-53 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T140 0-9 Sentence denotes Figure 3.
T141 11-105 Sentence denotes De novo search of 9-mer 2019-nCoV peptides with MHC presentation and immunogenicity potential.
T142 106-274 Sentence denotes The MHC binding was predicted for HLA-A*02:01, HLA-A*01:01, HLA-B*07:02, HLA-B*40:01 and HLA-C*07:02 alleles by NetMHCpan 4.0 and immunogenicity was predicted by iPred.