PMC:7111504 / 10821-11214
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 155 | 9-12 | Gene | denotes | MHC | Gene:3107 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T126 | 9-12 | GO:0042611 | denotes | MHC |
| T127 | 30-44 | BV_15 | denotes | immunogenicity |
| T128 | 114-121 | SO:0001023 | denotes | alleles |
| T129 | 144-158 | BV_15 | denotes | immunogenicity |
| T130 | 240-254 | BV_15 | denotes | immunogenicity |
| T131 | 334-345 | CHEBI:60816;CHEBI:60816 | denotes | immunogenic |
| T81007 | 9-12 | GO:0042611 | denotes | MHC |
| T71652 | 30-44 | BV_15 | denotes | immunogenicity |
| T43291 | 114-121 | SO:0001023 | denotes | alleles |
| T65127 | 144-158 | BV_15 | denotes | immunogenicity |
| T76335 | 240-254 | BV_15 | denotes | immunogenicity |
| T29057 | 334-345 | CHEBI:60816;CHEBI:60816 | denotes | immunogenic |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T64 | 9-12 | Body_part | denotes | MHC | http://purl.org/sig/ont/fma/fma84079 |
| T65 | 110-113 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
| T66 | 222-225 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T149 | 71-79 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T150 | 316-317 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T83 | 71-79 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T120 | 0-178 | Sentence | denotes | Based on MHC presentation and immunogenicity prediction, we detected 5 peptides predicted to bind 4 different HLA alleles of which 2 had strong immunogenicity scores ( Figure 3). |
| T121 | 179-279 | Sentence | denotes | For those 65 strong binders to 3 different HLA types, 39 had immunogenicity scores ≥ 0.5 ( Table 3). |
| T122 | 280-393 | Sentence | denotes | Collectively this analysis suggests a number of 9-mer immunogenic candidates for further experimental validation. |