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PMC:7111504 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
6 139-150 Species denotes coronavirus Tax:11118
7 160-169 Species denotes 2019-nCoV Tax:2697049
8 296-302 Species denotes people Tax:9606
9 349-355 Species denotes people Tax:9606
10 270-278 Disease denotes infected MESH:D007239
11 323-329 Disease denotes deaths MESH:D003643
14 379-401 Species denotes 2019 novel coronavirus Tax:2697049
15 613-622 Chemical denotes NetMHCpan
24 1314-1317 Gene denotes TCR Gene:6962
25 762-784 Species denotes 2019 novel coronavirus Tax:2697049
26 786-795 Species denotes 2019-nCoV Tax:2697049
27 837-841 Species denotes nCoV Tax:2697049
28 864-917 Species denotes Severe acute respiratory syndrome-related coronavirus Tax:694009
29 919-927 Species denotes SARS CoV Tax:694009
30 1024-1028 Species denotes nCoV Tax:2697049
31 1189-1198 Species denotes 2019-nCoV Tax:2697049
33 1591-1600 Species denotes 2019-nCoV Tax:2697049
37 1779-1796 Species denotes novel coronavirus Tax:2697049
38 1806-1815 Species denotes 2019-nCoV Tax:2697049
39 2341-2349 Disease denotes infected MESH:D007239
48 3396-3399 Gene denotes TCR Gene:6962
49 2676-2685 Species denotes 2019-nCoV Tax:2697049
50 2892-2945 Species denotes Severe acute respiratory syndrome-related coronavirus Tax:694009
51 2947-2955 Species denotes SARS CoV Tax:694009
52 2992-3001 Species denotes 2019-nCoV Tax:2697049
53 3085-3094 Species denotes 2019-nCoV Tax:2697049
54 3181-3185 Species denotes nCoV Tax:2697049
55 3320-3327 Species denotes 19 nCoV Tax:2697049
57 3489-3497 Species denotes SARS CoV Tax:694009
64 4073-4078 Gene denotes HLA-A Gene:3105
65 4140-4143 Gene denotes CD8 Gene:925
66 4149-4152 Gene denotes CD4 Gene:920
67 3664-3669 Species denotes human Tax:9606
68 3743-3752 Species denotes 2019-nCoV Tax:2697049
69 3938-3946 Species denotes SARS-CoV Tax:694009
84 4371-4376 Gene denotes HLA-A Gene:3105
85 5207-5212 Gene denotes HLA-B Gene:3106
86 5253-5258 Gene denotes HLA-A Gene:3105
87 5417-5422 Gene denotes HLA-A Gene:3105
88 5479-5487 Gene denotes HLA-DRB1 Gene:3123
89 5547-5552 Gene denotes HLA-A Gene:3105
90 5593-5598 Gene denotes HLA-A Gene:3105
91 5658-5663 Gene denotes HLA-A Gene:3105
92 5718-5725 Gene denotes HLA-DRA Gene:3122
93 5733-5737 Gene denotes DRB1 Gene:3123
94 5792-5800 Gene denotes HLA-DRB1 Gene:3123
95 5859-5867 Gene denotes HLA-DRB1 Gene:3123
96 4279-4288 Species denotes 2019-nCoV Tax:2697049
97 4384-4425 Disease denotes AFFGMSRIGMEVTPSGTW AFFGMSRIGMEVTPSGTW N MESH:C536108
100 4189-4198 Species denotes 2019-nCoV Tax:2697049
101 4246-4254 Species denotes SARS-CoV Tax:694009
103 5876-5884 Species denotes SARS-CoV Tax:694009
105 5954-5963 Species denotes 2019-nCoV Tax:2697049
108 6095-6103 Species denotes SARS CoV Tax:694009
109 6187-6196 Species denotes 2019-nCoV Tax:2697049
111 6363-6372 Species denotes 2019-nCoV Tax:2697049
115 6815-6824 Species denotes 2019-nCoV Tax:2697049
116 7150-7158 Species denotes SARS CoV Tax:694009
117 7245-7257 Species denotes Homo sapiens Tax:9606
119 7338-7347 Species denotes 2019-nCoV Tax:2697049
123 7671-7680 Species denotes 2019-nCov Tax:2697049
124 7911-7920 Species denotes 2019-nCoV Tax:2697049
125 8056-8065 Species denotes 2019-nCov Tax:2697049
127 8313-8322 Species denotes 2019-nCoV Tax:2697049
129 8205-8214 Species denotes 2019-nCoV Tax:2697049
131 9473-9482 Species denotes 2019-nCoV Tax:2697049
133 9493-9502 Species denotes 2019-nCoV Tax:2697049
135 10206-10215 Species denotes 2019-nCoV Tax:2697049
145 10728-10733 Gene denotes HLA-A Gene:3105
146 10741-10746 Gene denotes HLA-A Gene:3105
147 10754-10759 Gene denotes HLA-B Gene:3106
148 10767-10772 Gene denotes HLA-B Gene:3106
149 10783-10788 Gene denotes HLA-C Gene:3107
150 10550-10553 Gene denotes MHC Gene:3107
151 10331-10340 Species denotes 2019-nCov Tax:2697049
152 10383-10392 Species denotes 2019-nCoV Tax:2697049
153 10592-10601 Chemical denotes NetMHCpan
155 10830-10833 Gene denotes MHC Gene:3107
158 11225-11234 Species denotes 2019-nCoV Tax:2697049
159 11295-11304 Chemical denotes NetMHCpan
162 12144-12147 Gene denotes MHC Gene:3107
163 12120-12129 Species denotes 2019-nCoV Tax:2697049
171 12195-12198 Gene denotes MHC Gene:3107
172 12225-12230 Gene denotes HLA-A Gene:3105
173 12238-12243 Gene denotes HLA-A Gene:3105
174 12251-12256 Gene denotes HLA-B Gene:3106
175 12264-12269 Gene denotes HLA-B Gene:3106
176 12280-12285 Gene denotes HLA-C Gene:3107
177 12303-12312 Chemical denotes NetMHCpan
181 12405-12408 Gene denotes CD8 Gene:925
182 12410-12413 Gene denotes TCR Gene:6962
183 12379-12388 Species denotes 2019-nCoV Tax:2697049
185 12679-12682 Gene denotes TCR Gene:6962
192 12892-12895 Gene denotes CD8 Gene:925
193 12967-12972 Gene denotes HLA-A Gene:3105
194 13112-13115 Gene denotes TCR Gene:6962
195 12897-12900 Gene denotes TCR Gene:6962
196 13123-13132 Species denotes 2019-nCoV Tax:2697049
197 12767-12772 Disease denotes tumor MESH:D009369
203 13735-13740 Gene denotes HLA-A Gene:3105
204 13179-13188 Species denotes 2019-nCoV Tax:2697049
205 13615-13624 Species denotes 2019-nCoV Tax:2697049
206 13661-13669 Chemical denotes peptides MESH:D010455
207 13769-13778 Chemical denotes NetMHCpan
210 13837-13840 Gene denotes TCR Gene:6962
211 13877-13886 Species denotes 2019-nCoV Tax:2697049
214 14022-14025 Gene denotes TCR Gene:6962
215 13983-13992 Species denotes 2019-nCoV Tax:2697049
221 14177-14182 Gene denotes HLA-A Gene:3105
222 14117-14120 Gene denotes TCR Gene:6962
223 14059-14068 Species denotes 2019-nCoV Tax:2697049
224 14192-14201 Chemical denotes NetMHCpan
225 14214-14223 Chemical denotes NetMHCpan
235 15170-15173 Gene denotes MHC Gene:3107
236 15761-15764 Gene denotes TCR Gene:6962
237 15579-15588 Species denotes 2019-nCoV Tax:2697049
238 15248-15257 Chemical denotes NetMHCpan
239 15275-15282 Chemical denotes leucine MESH:D007930
240 15284-15285 Chemical denotes L MESH:D007930
241 15291-15297 Chemical denotes valine MESH:D014633
242 15447-15454 Chemical denotes leucine MESH:D007930
243 15465-15471 Chemical denotes valine MESH:D014633
246 15827-15836 Species denotes 2019-nCoV Tax:2697049
247 15859-15866 Chemical denotes leucine MESH:D007930
252 16039-16044 Gene denotes HLA-A Gene:3105
253 15983-15986 Gene denotes TCR Gene:6962
254 16062-16071 Chemical denotes NetMHCpan
255 16084-16093 Chemical denotes NetMHCpan
260 16653-16662 Species denotes 2019-nCoV Tax:2697049
261 16849-16858 Species denotes 2019-nCoV Tax:2697049
262 16965-16973 Disease denotes infected MESH:D007239
263 17204-17213 Disease denotes infection MESH:D007239
268 17268-17285 Species denotes novel coronavirus Tax:2697049
269 17477-17486 Species denotes 2019-nCoV Tax:2697049
270 17501-17509 Species denotes SARS CoV Tax:694009
271 17641-17650 Species denotes 2019-nCoV Tax:2697049
277 18596-18599 Gene denotes TCR Gene:6962
278 18342-18351 Species denotes 2019-nCoV Tax:2697049
279 18439-18447 Species denotes SARS CoV Tax:694009
280 18501-18509 Species denotes SARS CoV Tax:694009
281 18572-18581 Chemical denotes NetMHCpan
284 18778-18787 Species denotes 2019-nCoV Tax:2697049
285 18845-18853 CellLine denotes MN908947 CVCL:U508
287 19066-19075 Species denotes 2019-nCoV Tax:2697049
292 19953-19956 Gene denotes MHC Gene:3107
293 20153-20156 Gene denotes MHC Gene:3107
294 19965-19974 Chemical denotes NetMHCpan
295 19997-20006 Chemical denotes NetMHCpan
302 20377-20385 Gene denotes NY-ESO-1 Gene:246100
303 20395-20398 Gene denotes TCR Gene:6962
304 20449-20452 Gene denotes TCR Gene:6962
305 20506-20511 Gene denotes HLA-A Gene:3105
306 20259-20262 Gene denotes TCR Gene:6962
307 20291-20300 Species denotes 2019-nCoV Tax:2697049
312 20999-21008 Species denotes 2019-nCoV Tax:2697049
313 21151-21160 Chemical denotes NetMHCpan
314 21351-21360 Chemical denotes NetMHCpan
315 21371-21372 Chemical denotes L MESH:D007930
317 21590-21599 Species denotes 2019-nCoV Tax:2697049
320 21777-21786 Species denotes 2019-nCoV Tax:2697049
321 21844-21852 CellLine denotes MN908947 CVCL:U508
323 21930-21939 Species denotes 2019-nCoV Tax:2697049
328 22058-22062 Species denotes nCoV Tax:2697049
329 22108-22116 Species denotes SARS CoV Tax:694009
330 22141-22145 Species denotes nCoV Tax:2697049
331 22191-22199 Species denotes SARS CoV Tax:694009
333 22219-22223 Species denotes nCoV Tax:2697049
338 22412-22416 Species denotes nCoV Tax:2697049
339 22514-22518 Species denotes nCoV Tax:2697049
340 22445-22454 Chemical denotes NetMHCpan
341 22547-22556 Chemical denotes NetMHCpan
346 22601-22605 Species denotes nCoV Tax:2697049
347 22702-22706 Species denotes nCoV Tax:2697049
348 22634-22643 Chemical denotes NetMHCpan
349 22735-22744 Chemical denotes NetMHCpan

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T1 49-58 SP_7 denotes 2019-nCoV
T2 139-150 NCBITaxon:11118 denotes coronavirus
T3 160-169 SP_7 denotes 2019-nCoV
T4 296-302 NCBITaxon:9606 denotes people
T5 323-329 GO:0016265 denotes deaths
T6 349-355 NCBITaxon:9606 denotes people
T7 390-401 NCBITaxon:11118 denotes coronavirus
T8 448-453 NCBITaxon:10239 denotes viral
T9 454-465 CHEBI:60816;CHEBI:60816 denotes immunogenic
T10 480-494 BV_15 denotes immunogenicity
T11 551-558 SO:0001023 denotes alleles
T12 576-590 BV_15 denotes immunogenicity
T13 699-710 CHEBI:60816;CHEBI:60816 denotes immunogenic
T14 773-784 NCBITaxon:11118 denotes coronavirus
T15 786-795 SP_7 denotes 2019-nCoV
T16 877-888 UBERON:0001004 denotes respiratory
T17 906-917 NCBITaxon:11118 denotes coronavirus
T18 919-927 SP_10 denotes SARS CoV
T19 969-980 CHEBI:60816;CHEBI:60816 denotes immunogenic
T20 984-990 CL:0000084;BV_23 denotes T cell
T21 991-997 BV_23 denotes assays
T22 1078-1089 CHEBI:60816;CHEBI:60816 denotes immunogenic
T23 1123-1130 BV_9 denotes Epitope
T24 1189-1198 SP_7 denotes 2019-nCoV
T25 1241-1248 SO:0001023 denotes alleles
T26 1297-1303 CL:0000084 denotes T Cell
T27 1396-1410 BV_15 denotes immunogenicity
T28 1477-1491 BV_15 denotes immunogenicity
T29 1591-1600 SP_7 denotes 2019-nCoV
T30 1785-1796 NCBITaxon:11118 denotes coronavirus
T31 1806-1815 SP_7 denotes 2019-nCoV
T32 2628-2639 CHEBI:60816;CHEBI:60816 denotes immunogenic
T33 2676-2685 SP_7 denotes 2019-nCoV
T34 2763-2774 CHEBI:60816;CHEBI:60816 denotes immunogenic
T35 2808-2815 BV_9 denotes Epitope
T36 2905-2916 UBERON:0001004 denotes respiratory
T37 2934-2945 NCBITaxon:11118 denotes coronavirus
T38 2947-2955 SP_10 denotes SARS CoV
T39 2992-3001 SP_7 denotes 2019-nCoV
T40 3039-3043 SP_10 denotes SARS
T41 3085-3094 SP_7 denotes 2019-nCoV
T42 3135-3146 CHEBI:60816;CHEBI:60816 denotes immunogenic
T43 3150-3158 CL:0001034 denotes in vitro
T44 3159-3165 CL:0000084;BV_23 denotes T cell
T45 3166-3172 BV_23 denotes assays
T46 3234-3245 CHEBI:60816;CHEBI:60816 denotes immunogenic
T47 3284-3298 BV_15 denotes immunogenicity
T48 3353-3364 CHEBI:60816;CHEBI:60816 denotes immunogenic
T49 3489-3497 SP_10 denotes SARS CoV
T50 3498-3509 CHEBI:60816;CHEBI:60816 denotes immunogenic
T51 3536-3544 BV_9 denotes epitopes
T52 3641-3647 CL:0000084;BV_23 denotes T cell
T53 3648-3654 BV_23 denotes assays
T54 3664-3669 SP_6;NCBITaxon:9606 denotes human
T55 3682-3690 NCBITaxon:1 denotes organism
T56 3743-3752 SP_7 denotes 2019-nCoV
T57 3753-3772 SO:0000236 denotes open reading frames
T58 3774-3778 SO:0000236 denotes ORFs
T59 3938-3946 SP_10 denotes SARS-CoV
T60 4026-4033 SO:0001023 denotes alleles
T61 4073-4078 PR:000002009 denotes HLA-A
T62 4149-4152 PR:000001004 denotes CD4
T63 4154-4161 CL:0000084 denotes T cells
T64 4189-4198 SP_7 denotes 2019-nCoV
T65 4234-4245 CHEBI:60816;CHEBI:60816 denotes immunogenic
T66 4246-4254 SP_10 denotes SARS-CoV
T67 5876-5884 SP_10 denotes SARS-CoV
T68 5886-5898 SP_10 denotes Severe acute
T69 5899-5910 SP_10;UBERON:0001004 denotes respiratory
T70 5911-5931 SP_10 denotes syndrome coronavirus
T71 5954-5963 SP_7 denotes 2019-nCoV
T72 6027-6038 CHEBI:60816;CHEBI:60816 denotes immunogenic
T73 6039-6044 NCBITaxon:10239 denotes viral
T74 6095-6103 SP_10 denotes SARS CoV
T75 6124-6128 UBERON:0002415 denotes tail
T76 6187-6196 SP_7 denotes 2019-nCoV
T77 6197-6201 SO:0000236 denotes ORFs
T78 6363-6372 SP_7 denotes 2019-nCoV
T79 6415-6426 CHEBI:60816;CHEBI:60816 denotes immunogenic
T80 6598-6606 NCBITaxon:1 denotes organism
T81 6661-6669 BV_9 denotes epitopes
T82 6815-6824 SP_7 denotes 2019-nCoV
T83 7150-7158 SP_10 denotes SARS CoV
T84 7245-7257 SP_6;NCBITaxon:9606 denotes Homo sapiens
T85 7338-7347 SP_7 denotes 2019-nCoV
T86 7391-7405 BV_15 denotes immunogenicity
T87 7458-7472 BV_15 denotes immunogenicity
T88 7508-7522 BV_15 denotes immunogenicity
T89 7624-7638 BV_15 denotes immunogenicity
T90 7671-7680 SP_7 denotes 2019-nCov
T91 7721-7735 BV_15 denotes immunogenicity
T92 7843-7857 BV_15 denotes immunogenicity
T93 7911-7920 SP_7 denotes 2019-nCoV
T94 8010-8021 CHEBI:60816;CHEBI:60816 denotes immunogenic
T95 8056-8065 SP_7 denotes 2019-nCov
T96 8145-8159 BV_15 denotes immunogenicity
T97 8205-8214 SP_7 denotes 2019-nCoV
T98 8250-8264 BV_15 denotes immunogenicity
T99 9433-9447 BV_15 denotes immunogenicity
T100 9457-9468 CHEBI:60816;CHEBI:60816 denotes immunogenic
T101 9473-9482 SP_7 denotes 2019-nCoV
T102 9493-9502 SP_7 denotes 2019-nCoV
T103 9549-9560 CHEBI:60816;CHEBI:60816 denotes immunogenic
T104 9612-9626 BV_15 denotes immunogenicity
T105 9703-9717 BV_15 denotes immunogenicity
T106 9828-9842 BV_15 denotes immunogenicity
T107 9947-9958 CHEBI:60816;CHEBI:60816 denotes immunogenic
T108 10024-10035 CHEBI:60816;CHEBI:60816 denotes immunogenic
T109 10043-10054 CHEBI:60816;CHEBI:60816 denotes immunogenic
T110 10127-10141 BV_15 denotes immunogenicity
T111 10182-10193 CHEBI:60816;CHEBI:60816 denotes immunogenic
T112 10206-10215 SP_7 denotes 2019-nCoV
T113 10298-10309 CHEBI:60816;CHEBI:60816 denotes immunogenic
T114 10331-10340 SP_7 denotes 2019-nCov
T115 10373-10377 SP_9 denotes mers
T116 10383-10392 SP_7 denotes 2019-nCoV
T117 10486-10500 BV_15 denotes immunogenicity
T118 10550-10553 GO:0042611 denotes MHC
T119 10659-10669 SO:0001024 denotes haplotypes
T120 10728-10733 PR:000002009 denotes HLA-A
T121 10741-10746 PR:000002009 denotes HLA-A
T122 10754-10759 PR:000002010 denotes HLA-B
T123 10767-10772 PR:000002010 denotes HLA-B
T124 10783-10788 PR:000002011 denotes HLA-C
T125 10795-10802 SO:0001023 denotes alleles
T126 10830-10833 GO:0042611 denotes MHC
T127 10851-10865 BV_15 denotes immunogenicity
T128 10935-10942 SO:0001023 denotes alleles
T129 10965-10979 BV_15 denotes immunogenicity
T130 11061-11075 BV_15 denotes immunogenicity
T131 11155-11166 CHEBI:60816;CHEBI:60816 denotes immunogenic
T132 11225-11234 SP_7 denotes 2019-nCoV
T133 11284-11291 SO:0001023 denotes alleles
T134 11346-11353 SO:0001023 denotes alleles
T135 11358-11372 BV_15 denotes immunogenicity
T136 11409-11416 SO:0001023 denotes alleles
T137 11489-11495 SO:0001023 denotes allele
T138 12120-12129 SP_7 denotes 2019-nCoV
T139 12144-12147 GO:0042611 denotes MHC
T140 12165-12179 BV_15 denotes immunogenicity
T141 12195-12198 GO:0042611 denotes MHC
T142 12225-12230 PR:000002009 denotes HLA-A
T143 12238-12243 PR:000002009 denotes HLA-A
T144 12251-12256 PR:000002010 denotes HLA-B
T145 12264-12269 PR:000002010 denotes HLA-B
T146 12280-12285 PR:000002011 denotes HLA-C
T147 12292-12299 SO:0001023 denotes alleles
T148 12321-12335 BV_15 denotes immunogenicity
T149 12361-12375 BV_15 denotes Immunogenicity
T150 12379-12388 SP_7 denotes 2019-nCoV
T151 12414-12422 CHEBI:36357;CHEBI:36357 denotes molecule
T152 12560-12566 CL:0000084 denotes T cell
T153 12684-12690 CL:0000084 denotes T cell
T154 12738-12744 CL:0000084 denotes T cell
T155 12773-12781 CHEBI:59132;CHEBI:59132 denotes antigens
T156 12834-12841 CL:0000084 denotes T cells
T157 12967-12972 PR:000002009 denotes HLA-A
T158 13123-13132 SP_7 denotes 2019-nCoV
T159 13165-13169 SP_9 denotes mers
T160 13179-13188 SP_7 denotes 2019-nCoV
T161 13396-13410 BV_15 denotes immunogenicity
T162 13615-13624 SP_7 denotes 2019-nCoV
T163 13735-13740 PR:000002009 denotes HLA-A
T164 13877-13886 SP_7 denotes 2019-nCoV
T165 13960-13964 SP_9 denotes mers
T166 13983-13992 SP_7 denotes 2019-nCoV
T167 13993-13997 SO:0000236 denotes ORFs
T168 14059-14068 SP_7 denotes 2019-nCoV
T169 14177-14182 PR:000002009 denotes HLA-A
T170 15170-15173 GO:0042611 denotes MHC
T171 15391-15394 GO:0042611 denotes MHC
T172 15397-15404 PR:000002009 denotes HLA-A02
T173 15521-15528 PR:000002009 denotes HLA-A02
T174 15579-15588 SP_7 denotes 2019-nCoV
T175 15622-15636 BV_15 denotes immunogenicity
T176 15795-15802 PR:000002009 denotes HLA-A02
T177 15806-15815 SO:0001024 denotes haplotype
T178 15827-15836 SP_7 denotes 2019-nCoV
T179 16039-16044 PR:000002009 denotes HLA-A
T180 16627-16638 CHEBI:60816;CHEBI:60816 denotes immunogenic
T181 16653-16662 SP_7 denotes 2019-nCoV
T182 16828-16834 UBERON:0002405 denotes immune
T183 16849-16858 SP_7 denotes 2019-nCoV
T184 17139-17147 CHEBI:75958;CHEBI:75958 denotes solution
T185 17223-17234 NCBITaxon:1 denotes individuals
T186 17274-17285 NCBITaxon:11118 denotes coronavirus
T187 17477-17486 SP_7 denotes 2019-nCoV
T188 17501-17509 SP_10 denotes SARS CoV
T189 17510-17521 CHEBI:60816;CHEBI:60816 denotes immunogenic
T190 17604-17615 CHEBI:60816;CHEBI:60816 denotes immunogenic
T191 17632-17636 SP_10 denotes SARS
T192 17641-17650 SP_7 denotes 2019-nCoV
T193 18258-18269 CHEBI:60816;CHEBI:60816 denotes immunogenic
T194 18316-18327 CHEBI:60816;CHEBI:60816 denotes immunogenic
T195 18342-18351 SP_7 denotes 2019-nCoV
T196 18404-18415 CHEBI:60816;CHEBI:60816 denotes immunogenic
T197 18439-18447 SP_10 denotes SARS CoV
T198 18489-18500 CHEBI:60816;CHEBI:60816 denotes immunogenic
T199 18501-18509 SP_10 denotes SARS CoV
T200 18542-18553 CHEBI:60816;CHEBI:60816 denotes immunogenic
T201 18778-18787 SP_7 denotes 2019-nCoV
T202 18788-18806 SO:0000236 denotes open reading frame
T203 19066-19075 SP_7 denotes 2019-nCoV
T204 19076-19095 SO:0000236 denotes open reading frames
T205 19125-19136 CHEBI:60816;CHEBI:60816 denotes immunogenic
T206 19468-19475 BV_9 denotes epitope
T207 19567-19581 BV_15 denotes Immunogenicity
T208 19625-19639 BV_15 denotes immunogenicity
T209 19873-19879 CL:0000084 denotes T cell
T210 19909-19913 GO:0042611 denotes MHCs
T211 19953-19956 GO:0042611 denotes MHC
T212 20153-20156 GO:0042611 denotes MHC
T213 20291-20300 SP_7 denotes 2019-nCoV
T214 20301-20306 NCBITaxon:10239 denotes virus
T215 20380-20385 PR:P40963 denotes ESO-1
T216 20693-20697 SP_9 denotes mers
T217 20999-21008 SP_7 denotes 2019-nCoV
T218 21009-21014 NCBITaxon:10239 denotes virus
T219 21091-21095 SP_9 denotes mers
T220 21526-21537 GO:0006260 denotes Replication
T221 21590-21599 SP_7 denotes 2019-nCoV
T222 21777-21786 SP_7 denotes 2019-nCoV
T223 21787-21805 SO:0000236 denotes open reading frame
T224 21930-21939 SP_7 denotes 2019-nCoV
T225 22096-22107 CHEBI:60816;CHEBI:60816 denotes immunogenic
T226 22108-22116 SP_10 denotes SARS CoV
T227 22179-22190 CHEBI:60816;CHEBI:60816 denotes immunogenic
T228 22191-22199 SP_10 denotes SARS CoV
T229 22268-22279 CHEBI:60816;CHEBI:60816 denotes immunogenic
T230 22352-22363 CHEBI:60816;CHEBI:60816 denotes immunogenic
T231 22421-22432 CHEBI:60816;CHEBI:60816 denotes immunogenic
T232 22523-22534 CHEBI:60816;CHEBI:60816 denotes immunogenic
T233 22610-22621 CHEBI:60816;CHEBI:60816 denotes immunogenic
T234 22711-22722 CHEBI:60816;CHEBI:60816 denotes immunogenic
T256 22869-22870 BV_15 denotes o
T260 22890-22891 SP_7 denotes c
T262 22932-22933 CHEBI:60816;CHEBI:60816 denotes m
T263 22936-22937 GO:0042611 denotes m
T271 22979-22980 SO:0000236 denotes p
T278 23001-23002 UBERON:0002405;GO:0006955 denotes M
T279 23002-23003 GO:0006955 denotes R
T280 23003-23004 SP_7 denotes C
T281 23033-23034 GO:0006260 denotes c
T284 23034-23037 GO:0065007 denotes ula
T286 23037-23038 GO:0006955 denotes r
T288 23055-23056 SO:0000236 denotes n
T304 23103-23104 GO:0042611 denotes c
T61823 49-58 SP_7 denotes 2019-nCoV
T72909 139-150 NCBITaxon:11118 denotes coronavirus
T93819 160-169 SP_7 denotes 2019-nCoV
T66758 296-302 NCBITaxon:9606 denotes people
T59880 323-329 GO:0016265 denotes deaths
T64070 349-355 NCBITaxon:9606 denotes people
T6708 390-401 NCBITaxon:11118 denotes coronavirus
T53206 448-453 NCBITaxon:10239 denotes viral
T40159 454-465 CHEBI:60816;CHEBI:60816 denotes immunogenic
T52556 480-494 BV_15 denotes immunogenicity
T13713 551-558 SO:0001023 denotes alleles
T22577 576-590 BV_15 denotes immunogenicity
T88509 699-710 CHEBI:60816;CHEBI:60816 denotes immunogenic
T79155 773-784 NCBITaxon:11118 denotes coronavirus
T74980 786-795 SP_7 denotes 2019-nCoV
T79472 877-888 UBERON:0001004 denotes respiratory
T72088 906-917 NCBITaxon:11118 denotes coronavirus
T78785 919-927 SP_10 denotes SARS CoV
T6187 969-980 CHEBI:60816;CHEBI:60816 denotes immunogenic
T6838 984-990 CL:0000084;BV_23 denotes T cell
T61854 991-997 BV_23 denotes assays
T23618 1078-1089 CHEBI:60816;CHEBI:60816 denotes immunogenic
T65792 1123-1130 BV_9 denotes Epitope
T43750 1189-1198 SP_7 denotes 2019-nCoV
T71761 1241-1248 SO:0001023 denotes alleles
T45031 1297-1303 CL:0000084 denotes T Cell
T11574 1396-1410 BV_15 denotes immunogenicity
T5154 1477-1491 BV_15 denotes immunogenicity
T91105 1591-1600 SP_7 denotes 2019-nCoV
T78378 1785-1796 NCBITaxon:11118 denotes coronavirus
T16131 1806-1815 SP_7 denotes 2019-nCoV
T54000 2628-2639 CHEBI:60816;CHEBI:60816 denotes immunogenic
T55605 2676-2685 SP_7 denotes 2019-nCoV
T59948 2763-2774 CHEBI:60816;CHEBI:60816 denotes immunogenic
T85994 2808-2815 BV_9 denotes Epitope
T37622 2905-2916 UBERON:0001004 denotes respiratory
T60436 2934-2945 NCBITaxon:11118 denotes coronavirus
T19609 2947-2955 SP_10 denotes SARS CoV
T53947 2992-3001 SP_7 denotes 2019-nCoV
T59966 3039-3043 SP_10 denotes SARS
T58907 3085-3094 SP_7 denotes 2019-nCoV
T79712 3135-3146 CHEBI:60816;CHEBI:60816 denotes immunogenic
T51170 3150-3158 CL:0001034 denotes in vitro
T50252 3159-3165 CL:0000084;BV_23 denotes T cell
T88075 3166-3172 BV_23 denotes assays
T93294 3234-3245 CHEBI:60816;CHEBI:60816 denotes immunogenic
T3928 3284-3298 BV_15 denotes immunogenicity
T65499 3353-3364 CHEBI:60816;CHEBI:60816 denotes immunogenic
T90647 3489-3497 SP_10 denotes SARS CoV
T91789 3498-3509 CHEBI:60816;CHEBI:60816 denotes immunogenic
T36642 3536-3544 BV_9 denotes epitopes
T61606 3641-3647 CL:0000084;BV_23 denotes T cell
T92404 3648-3654 BV_23 denotes assays
T59646 3664-3669 SP_6;NCBITaxon:9606 denotes human
T46254 3682-3690 NCBITaxon:1 denotes organism
T44920 3743-3752 SP_7 denotes 2019-nCoV
T21846 3753-3772 SO:0000236 denotes open reading frames
T65235 3774-3778 SO:0000236 denotes ORFs
T32217 3938-3946 SP_10 denotes SARS-CoV
T71600 4026-4033 SO:0001023 denotes alleles
T25480 4073-4078 PR:000002009 denotes HLA-A
T8945 4149-4152 PR:000001004 denotes CD4
T43204 4154-4161 CL:0000084 denotes T cells
T24098 4189-4198 SP_7 denotes 2019-nCoV
T68353 4234-4245 CHEBI:60816;CHEBI:60816 denotes immunogenic
T10691 4246-4254 SP_10 denotes SARS-CoV
T43844 5876-5884 SP_10 denotes SARS-CoV
T38738 5886-5898 SP_10 denotes Severe acute
T69357 5899-5910 SP_10;UBERON:0001004 denotes respiratory
T49984 5911-5931 SP_10 denotes syndrome coronavirus
T77904 5954-5963 SP_7 denotes 2019-nCoV
T67615 6027-6038 CHEBI:60816;CHEBI:60816 denotes immunogenic
T6301 6039-6044 NCBITaxon:10239 denotes viral
T83775 6095-6103 SP_10 denotes SARS CoV
T79489 6124-6128 UBERON:0002415 denotes tail
T30840 6187-6196 SP_7 denotes 2019-nCoV
T18704 6197-6201 SO:0000236 denotes ORFs
T25028 6363-6372 SP_7 denotes 2019-nCoV
T38195 6415-6426 CHEBI:60816;CHEBI:60816 denotes immunogenic
T91224 6598-6606 NCBITaxon:1 denotes organism
T26522 6661-6669 BV_9 denotes epitopes
T51283 6815-6824 SP_7 denotes 2019-nCoV
T83402 7150-7158 SP_10 denotes SARS CoV
T38460 7245-7257 SP_6;NCBITaxon:9606 denotes Homo sapiens
T18430 7338-7347 SP_7 denotes 2019-nCoV
T78372 7391-7405 BV_15 denotes immunogenicity
T32405 7458-7472 BV_15 denotes immunogenicity
T57245 7508-7522 BV_15 denotes immunogenicity
T4440 7624-7638 BV_15 denotes immunogenicity
T13636 7671-7680 SP_7 denotes 2019-nCov
T61633 7721-7735 BV_15 denotes immunogenicity
T19852 7843-7857 BV_15 denotes immunogenicity
T63857 7911-7920 SP_7 denotes 2019-nCoV
T42242 8010-8021 CHEBI:60816;CHEBI:60816 denotes immunogenic
T74171 8056-8065 SP_7 denotes 2019-nCov
T89996 8145-8159 BV_15 denotes immunogenicity
T99846 8205-8214 SP_7 denotes 2019-nCoV
T22698 8250-8264 BV_15 denotes immunogenicity
T23450 9433-9447 BV_15 denotes immunogenicity
T46975 9457-9468 CHEBI:60816;CHEBI:60816 denotes immunogenic
T97466 9473-9482 SP_7 denotes 2019-nCoV
T87936 9493-9502 SP_7 denotes 2019-nCoV
T30689 9549-9560 CHEBI:60816;CHEBI:60816 denotes immunogenic
T76745 9612-9626 BV_15 denotes immunogenicity
T34290 9703-9717 BV_15 denotes immunogenicity
T17780 9828-9842 BV_15 denotes immunogenicity
T91242 9947-9958 CHEBI:60816;CHEBI:60816 denotes immunogenic
T28529 10024-10035 CHEBI:60816;CHEBI:60816 denotes immunogenic
T28382 10043-10054 CHEBI:60816;CHEBI:60816 denotes immunogenic
T58994 10127-10141 BV_15 denotes immunogenicity
T62473 10182-10193 CHEBI:60816;CHEBI:60816 denotes immunogenic
T49303 10206-10215 SP_7 denotes 2019-nCoV
T4279 10298-10309 CHEBI:60816;CHEBI:60816 denotes immunogenic
T6626 10331-10340 SP_7 denotes 2019-nCov
T90148 10373-10377 SP_9 denotes mers
T85766 10383-10392 SP_7 denotes 2019-nCoV
T90107 10486-10500 BV_15 denotes immunogenicity
T45797 10550-10553 GO:0042611 denotes MHC
T63293 10659-10669 SO:0001024 denotes haplotypes
T59388 10728-10733 PR:000002009 denotes HLA-A
T64753 10741-10746 PR:000002009 denotes HLA-A
T67356 10754-10759 PR:000002010 denotes HLA-B
T99742 10767-10772 PR:000002010 denotes HLA-B
T8696 10783-10788 PR:000002011 denotes HLA-C
T3771 10795-10802 SO:0001023 denotes alleles
T81007 10830-10833 GO:0042611 denotes MHC
T71652 10851-10865 BV_15 denotes immunogenicity
T43291 10935-10942 SO:0001023 denotes alleles
T65127 10965-10979 BV_15 denotes immunogenicity
T76335 11061-11075 BV_15 denotes immunogenicity
T29057 11155-11166 CHEBI:60816;CHEBI:60816 denotes immunogenic
T69709 11225-11234 SP_7 denotes 2019-nCoV
T97652 11284-11291 SO:0001023 denotes alleles
T30189 11346-11353 SO:0001023 denotes alleles
T17570 11358-11372 BV_15 denotes immunogenicity
T56623 11409-11416 SO:0001023 denotes alleles
T32084 11489-11495 SO:0001023 denotes allele
T12377 12120-12129 SP_7 denotes 2019-nCoV
T98397 12144-12147 GO:0042611 denotes MHC
T94145 12165-12179 BV_15 denotes immunogenicity
T75496 12195-12198 GO:0042611 denotes MHC
T7224 12225-12230 PR:000002009 denotes HLA-A
T38753 12238-12243 PR:000002009 denotes HLA-A
T92877 12251-12256 PR:000002010 denotes HLA-B
T36156 12264-12269 PR:000002010 denotes HLA-B
T68789 12280-12285 PR:000002011 denotes HLA-C
T46318 12292-12299 SO:0001023 denotes alleles
T4457 12321-12335 BV_15 denotes immunogenicity
T59205 12361-12375 BV_15 denotes Immunogenicity
T33056 12379-12388 SP_7 denotes 2019-nCoV
T536 12414-12422 CHEBI:36357;CHEBI:36357 denotes molecule
T9906 12560-12566 CL:0000084 denotes T cell
T69209 12684-12690 CL:0000084 denotes T cell
T36975 12738-12744 CL:0000084 denotes T cell
T33303 12773-12781 CHEBI:59132;CHEBI:59132 denotes antigens
T36223 12834-12841 CL:0000084 denotes T cells
T80986 12967-12972 PR:000002009 denotes HLA-A
T35114 13123-13132 SP_7 denotes 2019-nCoV
T99554 13165-13169 SP_9 denotes mers
T68802 13179-13188 SP_7 denotes 2019-nCoV
T66664 13396-13410 BV_15 denotes immunogenicity
T22144 13615-13624 SP_7 denotes 2019-nCoV
T48296 13735-13740 PR:000002009 denotes HLA-A
T18213 13877-13886 SP_7 denotes 2019-nCoV
T15461 13960-13964 SP_9 denotes mers
T62919 13983-13992 SP_7 denotes 2019-nCoV
T15838 13993-13997 SO:0000236 denotes ORFs
T241 14059-14068 SP_7 denotes 2019-nCoV
T1071 14177-14182 PR:000002009 denotes HLA-A
T4757 15170-15173 GO:0042611 denotes MHC
T28172 15391-15394 GO:0042611 denotes MHC
T77140 15397-15404 PR:000002009 denotes HLA-A02
T91368 15521-15528 PR:000002009 denotes HLA-A02
T69195 15579-15588 SP_7 denotes 2019-nCoV
T26868 15622-15636 BV_15 denotes immunogenicity
T24626 15795-15802 PR:000002009 denotes HLA-A02
T89323 15806-15815 SO:0001024 denotes haplotype
T65632 15827-15836 SP_7 denotes 2019-nCoV
T76744 16039-16044 PR:000002009 denotes HLA-A
T20287 16627-16638 CHEBI:60816;CHEBI:60816 denotes immunogenic
T62909 16653-16662 SP_7 denotes 2019-nCoV
T33026 16828-16834 UBERON:0002405 denotes immune
T14182 16849-16858 SP_7 denotes 2019-nCoV
T97785 17139-17147 CHEBI:75958;CHEBI:75958 denotes solution
T20380 17223-17234 NCBITaxon:1 denotes individuals
T88699 17274-17285 NCBITaxon:11118 denotes coronavirus
T36180 17477-17486 SP_7 denotes 2019-nCoV
T25512 17501-17509 SP_10 denotes SARS CoV
T97898 17510-17521 CHEBI:60816;CHEBI:60816 denotes immunogenic
T74245 17604-17615 CHEBI:60816;CHEBI:60816 denotes immunogenic
T63591 17632-17636 SP_10 denotes SARS
T88310 17641-17650 SP_7 denotes 2019-nCoV
T73381 18258-18269 CHEBI:60816;CHEBI:60816 denotes immunogenic
T75888 18316-18327 CHEBI:60816;CHEBI:60816 denotes immunogenic
T97602 18342-18351 SP_7 denotes 2019-nCoV
T82588 18404-18415 CHEBI:60816;CHEBI:60816 denotes immunogenic
T3215 18439-18447 SP_10 denotes SARS CoV
T41480 18489-18500 CHEBI:60816;CHEBI:60816 denotes immunogenic
T9465 18501-18509 SP_10 denotes SARS CoV
T57652 18542-18553 CHEBI:60816;CHEBI:60816 denotes immunogenic
T60950 18778-18787 SP_7 denotes 2019-nCoV
T91420 18788-18806 SO:0000236 denotes open reading frame
T9165 19066-19075 SP_7 denotes 2019-nCoV
T61515 19076-19095 SO:0000236 denotes open reading frames
T95930 19125-19136 CHEBI:60816;CHEBI:60816 denotes immunogenic
T81248 19468-19475 BV_9 denotes epitope
T78985 19567-19581 BV_15 denotes Immunogenicity
T6685 19625-19639 BV_15 denotes immunogenicity
T44475 19873-19879 CL:0000084 denotes T cell
T15470 19909-19913 GO:0042611 denotes MHCs
T92641 19953-19956 GO:0042611 denotes MHC
T12875 20153-20156 GO:0042611 denotes MHC
T75910 20291-20300 SP_7 denotes 2019-nCoV
T20990 20301-20306 NCBITaxon:10239 denotes virus
T75485 20380-20385 PR:P40963 denotes ESO-1
T55162 20693-20697 SP_9 denotes mers
T80024 20999-21008 SP_7 denotes 2019-nCoV
T4859 21009-21014 NCBITaxon:10239 denotes virus
T7055 21091-21095 SP_9 denotes mers
T1906 21526-21537 GO:0006260 denotes Replication
T57952 21590-21599 SP_7 denotes 2019-nCoV
T58035 21777-21786 SP_7 denotes 2019-nCoV
T75411 21787-21805 SO:0000236 denotes open reading frame
T96821 21930-21939 SP_7 denotes 2019-nCoV
T87728 22096-22107 CHEBI:60816;CHEBI:60816 denotes immunogenic
T92255 22108-22116 SP_10 denotes SARS CoV
T69618 22179-22190 CHEBI:60816;CHEBI:60816 denotes immunogenic
T13352 22191-22199 SP_10 denotes SARS CoV
T64310 22268-22279 CHEBI:60816;CHEBI:60816 denotes immunogenic
T56881 22352-22363 CHEBI:60816;CHEBI:60816 denotes immunogenic
T70997 22421-22432 CHEBI:60816;CHEBI:60816 denotes immunogenic
T65589 22523-22534 CHEBI:60816;CHEBI:60816 denotes immunogenic
T52528 22610-22621 CHEBI:60816;CHEBI:60816 denotes immunogenic
T46179 22711-22722 CHEBI:60816;CHEBI:60816 denotes immunogenic

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 547-550 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T2 986-990 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T3 1237-1240 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T4 1299-1303 Body_part denotes Cell http://purl.org/sig/ont/fma/fma68646
T5 3161-3165 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T6 3643-3647 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T7 4022-4025 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T8 4073-4076 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T9 4156-4161 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T10 4357-4369 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T11 4371-4374 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T12 4426-4433 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T13 4471-4474 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T14 4531-4538 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T15 4540-4543 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T16 4595-4602 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T17 4640-4643 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T18 4690-4693 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T19 4743-4750 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T20 4791-4798 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T21 4836-4839 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T22 4886-4889 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T23 4941-4948 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T24 4986-4989 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T25 5046-5053 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T26 5055-5058 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T27 5105-5112 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T28 5148-5151 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T29 5198-5205 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T30 5207-5210 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T31 5244-5251 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T32 5253-5256 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T33 5294-5306 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T34 5318-5321 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T35 5322-5324 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T36 5353-5365 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T37 5377-5380 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T38 5381-5383 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T39 5408-5415 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T40 5417-5420 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T41 5470-5477 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T42 5479-5482 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T43 5523-5535 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T44 5547-5550 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T45 5584-5591 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T46 5593-5596 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T47 5634-5646 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T48 5658-5661 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T49 5709-5716 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T50 5718-5721 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T51 5783-5790 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T52 5792-5795 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T53 5850-5857 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T54 5859-5862 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T55 10421-10432 Body_part denotes amino acids http://purl.org/sig/ont/fma/fma82739
T56 10454-10464 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T57 10550-10553 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T58 10620-10623 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T59 10728-10731 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T60 10741-10744 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T61 10754-10757 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T62 10767-10770 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T63 10783-10786 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T64 10830-10833 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T65 10931-10934 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T66 11043-11046 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T67 11280-11283 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T68 11342-11345 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T69 11485-11488 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T70 11588-11591 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T71 12144-12147 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T72 12195-12198 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T73 12225-12228 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T74 12238-12241 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T75 12251-12254 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T76 12264-12267 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T77 12280-12283 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T78 12562-12566 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T79 12686-12690 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T80 12740-12744 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T81 12836-12841 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T82 12967-12970 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T83 13735-13738 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T84 14177-14180 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T85 15170-15173 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T86 15275-15282 Body_part denotes leucine http://purl.org/sig/ont/fma/fma82757
T87 15291-15297 Body_part denotes valine http://purl.org/sig/ont/fma/fma82766
T88 15391-15394 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T89 15397-15400 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T90 15447-15454 Body_part denotes leucine http://purl.org/sig/ont/fma/fma82757
T91 15465-15471 Body_part denotes valine http://purl.org/sig/ont/fma/fma82766
T92 15521-15524 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T93 15795-15798 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T94 15859-15866 Body_part denotes leucine http://purl.org/sig/ont/fma/fma82757
T95 15867-15873 Body_part denotes valine http://purl.org/sig/ont/fma/fma82766
T96 16039-16042 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T97 17784-17788 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T98 19526-19537 Body_part denotes amino acids http://purl.org/sig/ont/fma/fma82739
T99 19737-19748 Body_part denotes amino acids http://purl.org/sig/ont/fma/fma82739
T100 19875-19879 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T101 19953-19956 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T102 20121-20135 Body_part denotes neural network http://purl.org/sig/ont/fma/fma74616
T103 20153-20156 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T104 20506-20509 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T105 21015-21022 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T106 21382-21393 Body_part denotes amino acids http://purl.org/sig/ont/fma/fma82739

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 6124-6128 Body_part denotes tail http://purl.obolibrary.org/obo/UBERON_0002415
T2 17784-17788 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 864-897 Disease denotes Severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T2 919-923 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T3 2892-2925 Disease denotes Severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T4 2947-2951 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T5 3039-3043 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T6 3489-3493 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T7 3938-3946 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 4246-4254 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T9 5722-5725 Disease denotes DRA http://purl.obolibrary.org/obo/MONDO_0019440
T10 5876-5884 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T11 5886-5919 Disease denotes Severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T12 6095-6099 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T13 7150-7154 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T14 11530-11532 Disease denotes NB http://purl.obolibrary.org/obo/MONDO_0005072
T15 11540-11542 Disease denotes NB http://purl.obolibrary.org/obo/MONDO_0005072
T16 11550-11552 Disease denotes NB http://purl.obolibrary.org/obo/MONDO_0005072
T17 11560-11562 Disease denotes NB http://purl.obolibrary.org/obo/MONDO_0005072
T18 11570-11572 Disease denotes NB http://purl.obolibrary.org/obo/MONDO_0005072
T19 12767-12772 Disease denotes tumor http://purl.obolibrary.org/obo/MONDO_0005070
T20 17204-17213 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T21 17501-17505 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T22 17632-17636 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T23 18439-18443 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T24 18501-18505 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T25 22108-22112 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T26 22191-22195 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 71-75 http://purl.obolibrary.org/obo/CLO_0008416 denotes peer
T2 71-75 http://purl.obolibrary.org/obo/CLO_0050081 denotes peer
T3 170-173 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T4 180-181 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 244-246 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T6 266-269 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T7 426-427 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 466-474 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T9 507-515 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T10 675-676 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 711-719 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T12 842-850 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T13 984-990 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T14 1021-1023 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T15 1029-1037 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T16 1045-1046 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 1090-1098 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T18 1169-1170 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T19 1205-1213 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T20 1297-1303 http://purl.obolibrary.org/obo/CL_0000084 denotes T Cell
T21 1375-1376 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T22 1456-1464 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T23 1470-1471 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T24 1620-1621 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T25 1816-1819 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T26 1826-1827 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T27 1863-1866 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T28 1882-1883 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T29 1912-1915 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T30 2088-2094 http://purl.obolibrary.org/obo/UBERON_0001456 denotes facing
T31 2095-2096 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T32 2126-2127 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T33 2156-2157 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 2177-2178 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T35 2455-2456 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T36 2662-2670 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T37 2698-2699 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T38 2729-2737 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T39 2775-2783 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T40 3008-3016 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T41 3052-3060 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T42 3159-3165 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T43 3178-3180 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T44 3186-3194 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T45 3202-3203 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T46 3246-3254 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T47 3264-3265 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T48 3328-3336 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T49 3510-3518 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T50 3580-3588 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T51 3641-3647 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T52 3664-3672 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human as
T53 3682-3690 http://purl.obolibrary.org/obo/OBI_0100026 denotes organism
T54 3682-3690 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organism
T55 3710-3711 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T56 3800-3808 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T57 3880-3888 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T58 3981-3989 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T59 4077-4078 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T60 4140-4143 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T61 4149-4152 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T62 4154-4161 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T63 4199-4207 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T64 4255-4263 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T65 4348-4356 http://purl.obolibrary.org/obo/UBERON_0000158 denotes Membrane
T66 4375-4376 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T67 4475-4476 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T68 4644-4645 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T69 4694-4695 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T70 4840-4841 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T71 4890-4891 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T72 4990-4991 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T73 5152-5153 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T74 5211-5212 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T75 5257-5258 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T76 5322-5324 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T77 5381-5383 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T78 5421-5422 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T79 5551-5552 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T80 5597-5598 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T81 5662-5663 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T82 5951-5953 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T83 5964-5972 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T84 6045-6053 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T85 6117-6118 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T86 6124-6128 http://purl.obolibrary.org/obo/UBERON_0002415 denotes tail
T87 6218-6226 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T88 6373-6381 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T89 6427-6435 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T90 6445-6446 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T91 6502-6510 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T92 6545-6546 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T93 6565-6573 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T94 6598-6606 http://purl.obolibrary.org/obo/OBI_0100026 denotes organism
T95 6598-6606 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organism
T96 6612-6620 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T97 6789-6790 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T98 6825-6833 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T99 6911-6913 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T100 6918-6920 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T101 6921-6929 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T102 7020-7028 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T103 7090-7091 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T104 7098-7100 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T105 7101-7109 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T106 7245-7257 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Homo sapiens
T107 7367-7375 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T108 7420-7428 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T109 7437-7438 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T110 7553-7561 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T111 7593-7594 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T112 7650-7651 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T113 7681-7689 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T114 7766-7768 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T115 7874-7882 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T116 7898-7900 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T117 7908-7910 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T118 7921-7929 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T119 8066-8074 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T120 8080-8081 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T121 8117-8119 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T122 8137-8138 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T123 8202-8204 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T124 8215-8223 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T125 8231-8232 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T126 8289-8297 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T127 9483-9491 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T128 9503-9511 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T129 9519-9520 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T130 9561-9569 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T131 9727-9728 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T132 9729-9736 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T133 9760-9761 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T134 9918-9919 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T135 9959-9967 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T136 10072-10075 http://purl.obolibrary.org/obo/CLO_0001755 denotes ask
T137 10194-10202 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T138 10228-10229 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T139 10278-10279 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T140 10310-10318 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T141 10407-10408 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T142 10510-10518 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T143 10648-10655 http://purl.obolibrary.org/obo/CLO_0009985 denotes focused
T144 10732-10733 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T145 10745-10746 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T146 10758-10759 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T147 10771-10772 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T148 10815-10818 http://purl.obolibrary.org/obo/CLO_0001302 denotes 3 4
T149 10892-10900 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T150 11137-11138 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T151 11241-11249 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T152 11616-11620 http://purl.obolibrary.org/obo/CLO_0053733 denotes 1 1
T153 11622-11629 http://purl.obolibrary.org/obo/CLO_0053001 denotes 1 1 4
T154 11654-11658 http://purl.obolibrary.org/obo/CLO_0053733 denotes 1 1
T155 11660-11667 http://purl.obolibrary.org/obo/CLO_0053001 denotes 1 1 4
T156 11689-11693 http://purl.obolibrary.org/obo/CLO_0053733 denotes 1 1
T157 11727-11731 http://purl.obolibrary.org/obo/CLO_0053733 denotes 1 1
T158 11764-11768 http://purl.obolibrary.org/obo/CLO_0053733 denotes 1 1
T159 11849-11853 http://purl.obolibrary.org/obo/CLO_0053733 denotes 1 1
T160 11954-11958 http://purl.obolibrary.org/obo/CLO_0053733 denotes 1 1
T161 11992-11996 http://purl.obolibrary.org/obo/CLO_0053733 denotes 1 1
T162 12033-12037 http://purl.obolibrary.org/obo/CLO_0053733 denotes 1 1
T163 12130-12138 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T164 12229-12230 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T165 12242-12243 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T166 12255-12256 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T167 12268-12269 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T168 12389-12397 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T169 12405-12408 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T170 12560-12566 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T171 12684-12690 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T172 12708-12711 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T173 12717-12729 http://purl.obolibrary.org/obo/OBI_0000968 denotes instrumental
T174 12738-12744 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T175 12822-12823 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T176 12834-12841 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T177 12892-12895 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T178 12946-12953 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T179 12971-12972 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T180 13027-13028 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T181 13133-13140 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T182 13204-13212 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T183 13228-13238 http://purl.obolibrary.org/obo/CLO_0001658 denotes Activating
T184 13326-13333 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T185 13383-13384 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T186 13459-13469 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T187 13625-13633 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T188 13639-13640 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T189 13661-13669 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T190 13687-13695 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T191 13739-13740 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T192 13887-13895 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T193 14075-14083 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T194 14181-14182 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T195 14231-14238 http://purl.obolibrary.org/obo/PR_000018263 denotes Peptide
T196 14255-14265 http://purl.obolibrary.org/obo/CLO_0001658 denotes Activation
T197 15208-15216 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T198 15325-15327 http://purl.obolibrary.org/obo/CLO_0008307 denotes P2
T199 15336-15338 http://purl.obolibrary.org/obo/CLO_0008343 denotes P9
T200 15417-15425 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T201 15433-15441 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T202 15458-15460 http://purl.obolibrary.org/obo/CLO_0008307 denotes P2
T203 15475-15477 http://purl.obolibrary.org/obo/CLO_0008343 denotes P9
T204 15553-15560 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T205 15589-15597 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T206 15609-15617 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T207 15656-15664 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T208 15717-15725 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T209 15843-15851 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T210 15895-15903 http://purl.obolibrary.org/obo/PR_000018263 denotes Peptides
T211 16043-16044 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T212 16101-16108 http://purl.obolibrary.org/obo/PR_000018263 denotes Peptide
T213 16125-16135 http://purl.obolibrary.org/obo/CLO_0001658 denotes Activation
T214 16588-16589 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T215 16639-16647 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T216 16795-16796 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T217 17068-17080 http://purl.obolibrary.org/obo/OBI_0000968 denotes instrumental
T218 17112-17113 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T219 17241-17242 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T220 17438-17439 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T221 17522-17530 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T222 17616-17623 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T223 17696-17697 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T224 17918-17919 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T225 18270-18278 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T226 18328-18336 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T227 18510-18518 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T228 18685-18686 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T229 19137-19145 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T230 19396-19404 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T231 19420-19428 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T232 19500-19508 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T233 19654-19661 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T234 19686-19694 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T235 19769-19772 http://purl.obolibrary.org/obo/CLO_0050884 denotes ten
T236 19803-19804 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T237 19819-19826 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T238 19871-19872 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T239 19873-19879 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T240 19934-19941 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T241 20023-20024 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T242 20084-20091 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T243 20119-20120 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T244 20184-20191 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T245 20301-20306 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T246 20340-20341 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T247 20377-20379 http://purl.obolibrary.org/obo/CLO_0009877 denotes NY
T248 20402-20403 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T249 20473-20480 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T250 20510-20511 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T251 20616-20626 http://purl.obolibrary.org/obo/CLO_0001658 denotes Activating
T252 20729-20730 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T253 20814-20815 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T254 20817-20818 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T255 20852-20862 http://purl.obolibrary.org/obo/CLO_0001658 denotes Activating
T256 20923-20924 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T257 20971-20972 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T258 20974-20975 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T259 21009-21014 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T260 21045-21046 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T261 21048-21049 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T262 21101-21102 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T263 21259-21267 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T264 21284-21285 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T265 22063-22071 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T266 22146-22154 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T267 22200-22208 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T268 22224-22232 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T269 22308-22316 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T270 22369-22377 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T271 22433-22441 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T272 22535-22543 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T273 22622-22630 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T274 22723-22731 http://purl.obolibrary.org/obo/PR_000018263 denotes peptides
T275 22934-22939 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 466-474 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T2 507-515 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T3 711-719 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T4 842-850 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T5 1029-1037 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T6 1090-1098 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T7 1205-1213 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T8 1456-1464 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T9 2662-2670 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
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T90 13133-13140 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T91 13204-13212 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T92 13326-13333 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T93 13625-13633 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T94 13661-13669 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T95 13687-13695 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T96 13887-13895 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T97 14075-14083 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T98 14231-14238 Chemical denotes Peptide http://purl.obolibrary.org/obo/CHEBI_16670
T99 15208-15216 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T100 15275-15282 Chemical denotes leucine http://purl.obolibrary.org/obo/CHEBI_25017
T101 15291-15297 Chemical denotes valine http://purl.obolibrary.org/obo/CHEBI_27266
T102 15325-15327 Chemical denotes P2 http://purl.obolibrary.org/obo/CHEBI_33472
T103 15417-15425 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T104 15433-15441 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T105 15447-15454 Chemical denotes leucine http://purl.obolibrary.org/obo/CHEBI_25017
T106 15458-15460 Chemical denotes P2 http://purl.obolibrary.org/obo/CHEBI_33472
T107 15465-15471 Chemical denotes valine http://purl.obolibrary.org/obo/CHEBI_27266
T108 15550-15552 Chemical denotes LV http://purl.obolibrary.org/obo/CHEBI_73579
T109 15553-15560 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T110 15589-15597 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T111 15609-15617 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T112 15656-15664 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T113 15717-15725 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T114 15843-15851 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T115 15859-15866 Chemical denotes leucine http://purl.obolibrary.org/obo/CHEBI_25017
T116 15867-15873 Chemical denotes valine http://purl.obolibrary.org/obo/CHEBI_27266
T117 16101-16108 Chemical denotes Peptide http://purl.obolibrary.org/obo/CHEBI_16670
T118 16639-16647 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T119 17139-17147 Chemical denotes solution http://purl.obolibrary.org/obo/CHEBI_75958
T120 17522-17530 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T121 17616-17623 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T122 18270-18278 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T123 18328-18336 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T124 18510-18518 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T125 19137-19145 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T126 19396-19404 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T127 19420-19428 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T128 19468-19475 Chemical denotes epitope http://purl.obolibrary.org/obo/CHEBI_53000
T129 19500-19508 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T130 19526-19537 Chemical denotes amino acids http://purl.obolibrary.org/obo/CHEBI_33709
T131 19526-19531 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T132 19532-19537 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T133 19654-19661 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T134 19686-19694 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T135 19737-19748 Chemical denotes amino acids http://purl.obolibrary.org/obo/CHEBI_33709
T136 19737-19742 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
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T138 19819-19826 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T139 19934-19941 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T140 20073-20079 Chemical denotes ligand http://purl.obolibrary.org/obo/CHEBI_52214
T141 20084-20091 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T142 20184-20191 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T143 20377-20379 Chemical denotes NY http://purl.obolibrary.org/obo/CHEBI_73427
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T145 21015-21022 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T146 21259-21267 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T147 21382-21393 Chemical denotes amino acids http://purl.obolibrary.org/obo/CHEBI_33709
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T151 22146-22154 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
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T154 22308-22316 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T155 22369-22377 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
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T158 22622-22630 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T159 22723-22731 Chemical denotes peptides http://purl.obolibrary.org/obo/CHEBI_16670
T160 22852-22854 Chemical denotes CC http://purl.obolibrary.org/obo/CHEBI_28940

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 12767-12772 Phenotype denotes tumor http://purl.obolibrary.org/obo/HP_0002664

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 1-58 Sentence denotes In silico identification of vaccine targets for 2019-nCoV
T2 59-83 Sentence denotes [version 2; peer review:
T3 84-95 Sentence denotes 3 approved]
T4 97-105 Sentence denotes Abstract
T5 106-117 Sentence denotes Background:
T6 118-211 Sentence denotes The newly identified coronavirus known as 2019-nCoV has posed a serious global health threat.
T7 212-365 Sentence denotes According to the latest report (18-February-2020), it has infected more than 72,000 people globally and led to deaths of more than 1,016 people in China.
T8 366-374 Sentence denotes Methods:
T9 375-475 Sentence denotes The 2019 novel coronavirus proteome was aligned to a curated database of viral immunogenic peptides.
T10 476-627 Sentence denotes The immunogenicity of detected peptides and their binding potential to HLA alleles was predicted by immunogenicity predictive models and NetMHCpan 4.0.
T11 628-636 Sentence denotes Results:
T12 637-817 Sentence denotes We report in silico identification of a comprehensive list of immunogenic peptides that can be used as potential targets for 2019 novel coronavirus (2019-nCoV) vaccine development.
T13 818-998 Sentence denotes First, we found 28 nCoV peptides identical to Severe acute respiratory syndrome-related coronavirus (SARS CoV) that have previously been characterized immunogenic by T cell assays.
T14 999-1147 Sentence denotes Second, we identified 48 nCoV peptides having a high degree of similarity with immunogenic peptides deposited in The Immune Epitope Database (IEDB).
T15 1148-1502 Sentence denotes Lastly, we conducted a de novo search of 2019-nCoV 9-mer peptides that i) bind to common HLA alleles in Chinese and European population and ii) have T Cell Receptor (TCR) recognition potential by positional weight matrices and a recently developed immunogenicity algorithm, iPred, and identified in total 63 peptides with a high immunogenicity potential.
T16 1503-1515 Sentence denotes Conclusions:
T17 1516-1719 Sentence denotes Given the limited time and resources to develop vaccine and treatments for 2019-nCoV, our work provides a shortlist of candidates for experimental validation and thus can accelerate development pipeline.
T18 1721-1733 Sentence denotes Introduction
T19 1734-1908 Sentence denotes The emergence and rapid spread of the recent novel coronavirus known as 2019-nCoV has posed a serious global health threat 1 and has already caused a huge financial burden 2.
T20 1909-2084 Sentence denotes It has further challenged the scientific and industrial community for quick control practices, and equally importantly to develop effective vaccines to prevent its recurrence.
T21 2085-2359 Sentence denotes In facing a rapid epidemical outbreak to a novel and unknown pathogen, a key bottleneck for a proper and deep investigation, which is fundamental for vaccine development, is the limited -- to almost no -- access of the scientific community to samples from infected subjects.
T22 2360-2555 Sentence denotes As such, in silico predictions of targets for vaccines are of high importance and can serve as a guidance to medical and experimental experts for the best and timely use of the limited resources.
T23 2556-2686 Sentence denotes In this regard, we report our recent effort to computationally identify immunogenic and/or cross-reactive peptides from 2019-nCoV.
T24 2687-3017 Sentence denotes We provide a detailed screen of candidate peptides based on comparison with immunogenic peptides deposited in the Immune Epitope Database and Analysis Resource (IEDB) database including those derived from Severe acute respiratory syndrome-related coronavirus (SARS CoV) along with de novo prediction from 2019-nCoV 9-mer peptides.
T25 3018-3440 Sentence denotes Here, we found i) 28 SARS-derived peptides having exact matches in 2019-nCoV proteome previously characterized to be immunogenic by in vitro T cell assays, ii) 22 nCoV peptides having a high sequence similarity with immunogenic peptides but with a greater predicted immunogenicity score, and iii) 44 + 19 nCoV peptides predicted to be immunogenic by the iPred algorithm and 1G4 TCR positional weight matrices respectively.
T26 3442-3449 Sentence denotes Results
T27 3451-3562 Sentence denotes Identification of 28 exact matches to SARS CoV immunogenic peptides by screening all epitopes deposited in IEDB
T28 3563-3691 Sentence denotes We collected all peptides in IEDB ( 3, as of 13-02-2020) reported positive in T cell assays and have human as the host organism.
T29 3692-3837 Sentence denotes We then conducted a local sequence alignment of 10 2019-nCoV open reading frames (ORFs) against 35,225 IEDB peptides, and found 28 exact matches.
T30 3838-3974 Sentence denotes Surprisingly, all identical hits (against peptides having sequence length greater than 3) were from SARS-CoV ( Table 1, Data Table 1 4).
T31 3975-4175 Sentence denotes These peptides have been shown to bind various HLA alleles, although with higher tendency towards HLA-A:02:01, from both class I and class II, and can be target for CD8+ and CD4+ T cells respectively.
T32 4176-4184 Sentence denotes Table 1.
T33 4186-4264 Sentence denotes 28 2019-nCoV peptides having exact matches with immunogenic SARS-CoV peptides.
T34 4265-4323 Sentence denotes IEDB.peptide 2019-nCoV.pattern Antigen.Name Allele.Name
T35 4324-4383 Sentence denotes TLACFVLAAV TLACFVLAAV Membrane glycoprotein HLA-A *02:01
T36 4384-4433 Sentence denotes AFFGMSRIGMEVTPSGTW AFFGMSRIGMEVTPSGTW N protein
T37 4434-4483 Sentence denotes ALNTPKDHI ALNTPKDHI Nucleoprotein HLA-A *02:01
T38 4484-4552 Sentence denotes AQFAPSASAFFGMSR AQFAPSASAFFGMSR nucleocapsid protein HLA class II
T39 4553-4602 Sentence denotes AQFAPSASAFFGMSRIGM AQFAPSASAFFGMSRIGM N protein
T40 4603-4652 Sentence denotes GMSRIGMEV GMSRIGMEV Nucleoprotein HLA-A *02:01
T41 4653-4702 Sentence denotes ILLNKHIDA ILLNKHIDA Nucleoprotein HLA-A *02:01
T42 4703-4750 Sentence denotes IRQGTDYKHWPQIAQFA IRQGTDYKHWPQIAQFA N protein
T43 4751-4798 Sentence denotes KHWPQIAQFAPSASAFF KHWPQIAQFAPSASAFF N protein
T44 4799-4848 Sentence denotes LALLLLDRL LALLLLDRL Nucleoprotein HLA-A *02:01
T45 4849-4898 Sentence denotes LLLDRLNQL LLLDRLNQL Nucleoprotein HLA-A *02:01
T46 4899-4948 Sentence denotes LLNKHIDAYKTFPPTEPK LLNKHIDAYKTFPPTEPK N protein
T47 4949-4998 Sentence denotes LQLPQGTTL LQLPQGTTL Nucleoprotein HLA-A *02:01
T48 4999-5066 Sentence denotes RRPQGLPNNTASWFT RRPQGLPNNTASWFT nucleocapsid protein HLA class I
T49 5067-5112 Sentence denotes YKTFPPTEPKKDKKKK YKTFPPTEPKKDKKKK N protein
T50 5113-5160 Sentence denotes ILLNKHID ILLNKHID Nucleoprotein HLA-A *02:01
T51 5161-5219 Sentence denotes MEVTPSGTWL MEVTPSGTWL nucleocapsid protein HLA-B *40:01
T52 5220-5265 Sentence denotes ALNTLVKQL ALNTLVKQL S protein HLA-A *02:01
T53 5266-5324 Sentence denotes FIAGLIAIV FIAGLIAIV Spike glycoprotein precursor HLA-A2
T54 5325-5383 Sentence denotes LITGRLQSL LITGRLQSL Spike glycoprotein precursor HLA-A2
T55 5384-5429 Sentence denotes NLNESLIDL NLNESLIDL S protein HLA-A *02:01
T56 5430-5494 Sentence denotes QALNTLVKQLSSNFGAI QALNTLVKQLSSNFGAI S protein HLA-DRB1 *04:01
T57 5495-5559 Sentence denotes RLNEVAKNL RLNEVAKNL Spike glycoprotein precursor HLA-A *02:01
T58 5560-5605 Sentence denotes VLNDILSRL VLNDILSRL S protein HLA-A *02:01
T59 5606-5670 Sentence denotes VVFLHVTYV VVFLHVTYV Spike glycoprotein precursor HLA-A *02:01
T60 5671-5744 Sentence denotes GAALQIPFAMQMAYRF GAALQIPFAMQMAYRF S protein HLA-DRA *01:01/DRB1 *07:01
T61 5745-5807 Sentence denotes MAYRFNGIGVTQNVLY MAYRFNGIGVTQNVLY S protein HLA-DRB1 *04:01
T62 5808-5874 Sentence denotes QLIRAAEIRASANLAATK QLIRAAEIRASANLAATK S protein HLA-DRB1 *04:01
T63 5875-5885 Sentence denotes *SARS-CoV:
T64 5886-5931 Sentence denotes Severe acute respiratory syndrome coronavirus
T65 5933-6053 Sentence denotes Identification of 22 2019-nCoV peptides with high degree of similarity to previously reported immunogenic viral peptides
T66 6054-6249 Sentence denotes In addition to 28 identical hits against SARS CoV, we observed a long tail in distribution of normalized alignment scores between 10 2019-nCoV ORFs and 35,225 IEDB peptides ( Figure 1A, Methods).
T67 6250-6351 Sentence denotes We therefore set out to further investigate potential vaccine targets among highly similar sequences.
T68 6352-6361 Sentence denotes Figure 1.
T69 6363-6444 Sentence denotes 2019-nCoV peptides with high sequence similarity to immunogenic peptides in IEDB.
T70 6445-6447 Sentence denotes A.
T71 6448-6544 Sentence denotes Comparison of normalized sequence alignment score for peptides with exact and non-exact matches.
T72 6545-6547 Sentence denotes B.
T73 6548-6607 Sentence denotes Number of target peptides grouped by their source organism.
T74 6608-6730 Sentence denotes The peptides having an exact sequence alignment with epitopes in IEDB had normalized alignment scores ranging from 4 to 6.
T75 6731-6869 Sentence denotes Taking the normalized alignment score of exact matches as a reference, we extracted 2019-nCoV peptides having score greater or equal to 4.
T76 6870-7008 Sentence denotes As illustrated in Figure 1A, we observed 45 and 11 peptides having normalized alignment score ≥ 4 and ≥ 5 respectively ( Figure 1A inset).
T77 7009-7159 Sentence denotes The target peptides were originated from 10 different sources ( Figure 1B) where a total 36 peptides were derived from strains associated to SARS CoV.
T78 7160-7258 Sentence denotes Of interest, we also observed 7 hits having high sequence similarity to targets from Homo sapiens.
T79 7259-7579 Sentence denotes In order to investigate the extent to which the difference between the source (2019-nCoV) and target (IEDB) peptides influences the immunogenicity of the source peptides we used a recently published immunogenicity model 5 to predict and compare the immunogenicity between the source and target peptides (Data Table 2 4).
T80 7580-7755 Sentence denotes We could see a similar (close to identical) immunogenicity scores for a number of IEDB and 2019-nCov peptides especially for those with high immunogenicity scores ( Figure 2).
T81 7756-7883 Sentence denotes While all 48 can be potential targets, of particular interest were those having higher immunogenicity score than IEDB peptides.
T82 7884-8033 Sentence denotes Here, we list 22 out of 48 2019-nCoV peptides that scored higher compared to their targets that have been characterized to be immunogenic ( Table 2).
T83 8034-8183 Sentence denotes In this list 15 (68%) 2019-nCov peptides have a score higher than 0.5 whereas only 11(50%) of IEDB get a score immunogenicity score greater than 0.5.
T84 8184-8192 Sentence denotes Table 2.
T85 8194-8298 Sentence denotes List of 22 2019-nCoV peptides having a higher predicted immunogenicity score than their target peptides.
T86 8299-8352 Sentence denotes IEDB.peptide 2019-nCoV.pattern IEDB.prob nCol.prob
T87 8353-8390 Sentence denotes WYMWLGARY WYIWLG 0.999249 0.999441
T88 8391-8431 Sentence denotes GLMWLSYFV GLMWLSYFI 0.995073 0.998216
T89 8432-8471 Sentence denotes GLVFLCLQY GIVFMCVEY 0.98123 0.984127
T90 8472-8544 Sentence denotes TWLTYHGAIKLDDKDPQFKDNVILL TWLTYTGAIKLDDKDPNFKDQVILL 0.925862 0.975242
T91 8545-8596 Sentence denotes IGMEVTPSGTWLTYH IGMEVTPSGTWLTY 0.903518 0.919184
T92 8597-8649 Sentence denotes GETALALLLLDRLNQ GDAALALLLLDRLNQ 0.853114 0.900655
T93 8650-8702 Sentence denotes TPSGTWLTYHGAIKL TPSGTWLTYTGAIKL 0.620894 0.662417
T94 8703-8743 Sentence denotes SIVAYTMSL SIIAYTMSL 0.589694 0.693763
T95 8744-8796 Sentence denotes RRPQGLPNNIASWFT RRPQGLPNNTASWFT 0.533253 0.584355
T96 8797-8831 Sentence denotes YNLKWN YNL-WN 0.520244 0.765309
T97 8832-8889 Sentence denotes AGCLIGAEHVDTSYECDI AGCLIGAEHVNNSYECDI 0.503905 0.56813
T98 8890-8948 Sentence denotes GFMKQYGECLGDINARDL GFIKQYGDCLGDIAARDL 0.471939 0.506817
T99 8949-9001 Sentence denotes ANKEGIVWVATEGAL ANKDGIIWVATEGAL 0.367723 0.404796
T100 9002-9036 Sentence denotes WNPDDY WNADLY 0.355018 0.584726
T101 9037-9071 Sentence denotes PDDYGG PDDFTG 0.334887 0.527287
T102 9072-9129 Sentence denotes TWLTYHGAIKLDDKDPQF TWLTYTGAIKLDDKDPNF 0.27017 0.529675
T103 9130-9163 Sentence denotes DEVNQI DEVRQI 0.18504 0.187797
T104 9164-9216 Sentence denotes SSKRFQPFQQFGRDV SNKKFLPFQQFGRDI 0.098384 0.119472
T105 9217-9256 Sentence denotes NHDSPDAEL NHTSPDVDL 0.067808 0.17889
T106 9257-9299 Sentence denotes TKQYNVTQAF TKAYNVTQAF 0.054818 0.171488
T107 9300-9358 Sentence denotes VKQMYKTPTLKYFGGFNF VKQIYKTPPIKDFGGFNF 0.018685 0.135681
T108 9359-9411 Sentence denotes QKRTATKQYNVTQAF QKRTATKAYNVTQAF 0.004891 0.037776
T109 9412-9421 Sentence denotes Figure 2.
T110 9423-9492 Sentence denotes Predicted immunogenicity for IEDB immunogenic vs. 2019-nCoV peptides.
T111 9493-9656 Sentence denotes 2019-nCoV peptides having a high sequence similarity to immunogenic peptides and their targets were analysed for their immunogenicity potential by iPred algorithm.
T112 9657-9890 Sentence denotes It is worth noting that in general predicting immunogenicity of given a peptide is challenging and not a fully solved problem, and therefore current models for predicting immunogenicity are suboptimal. iPred is also not an exception.
T113 9891-10056 Sentence denotes In fact, we could see that a substantial number of IEDB immunogenic peptides were scored < 0.5 (the threshold score used to classify immunogenic vs non-immunogenic).
T114 10057-10162 Sentence denotes This led us to ask whether we can gather any other evidence of either immunogenicity or cross-reactivity.
T115 10164-10224 Sentence denotes De novo search of immunogenic peptides in 2019-nCoV proteome
T116 10225-10359 Sentence denotes As a complementary reciprocal approach, we conducted a de novo search of immunogenic peptides against the 2019-nCov proteome sequence.
T117 10360-10481 Sentence denotes We scanned 9-mers from 2019-nCoV proteome with a window of 9 amino acids and step length of 1 amino acid (9613 in total).
T118 10482-10630 Sentence denotes The immunogenicity of 9-mer peptides were predicted using iPred and MHC presentation scores were gauged using NetMHCpan 4.0 6 for various HLA types.
T119 10631-10820 Sentence denotes In this task, we focused on haplotypes common in Chinese and European populations, which include HLA-A*02:01, HLA-A*01:01, HLA-B*07:02, HLA-B*40:01 and HLA-C*07:02 alleles (Data Table 3 4).
T120 10821-10999 Sentence denotes Based on MHC presentation and immunogenicity prediction, we detected 5 peptides predicted to bind 4 different HLA alleles of which 2 had strong immunogenicity scores ( Figure 3).
T121 11000-11100 Sentence denotes For those 65 strong binders to 3 different HLA types, 39 had immunogenicity scores ≥ 0.5 ( Table 3).
T122 11101-11214 Sentence denotes Collectively this analysis suggests a number of 9-mer immunogenic candidates for further experimental validation.
T123 11215-11223 Sentence denotes Table 3.
T124 11225-11394 Sentence denotes 2019-nCoV 9-mer peptides predicted to bind 4 different HLA alleles by NetMHCpan 4.0, and those predicted to bind ≥ 3 HLA alleles and immunogenicity score ≥ 0.9 by iPred.
T125 11395-11496 Sentence denotes For different alleles, 0 denotes non-binding and 1 denotes binding predicted for specific HLA allele.
T126 11497-11591 Sentence denotes Antigen.epitope Imm.prob A0101.NB A0201.NB B0702.NB B4001.NB C0702.NB Total binding HLA
T127 11592-11629 Sentence denotes VQMAPISAM 0.893938 0 1 1 1 1 4
T128 11630-11667 Sentence denotes AMYTPHTVL 0.862427 0 1 1 1 1 4
T129 11668-11705 Sentence denotes TLDSKTQSL 0.254998 1 1 1 0 1 4
T130 11706-11743 Sentence denotes KVDGVVQQL 0.191786 1 1 1 0 1 4
T131 11744-11780 Sentence denotes KVDGVDVEL 0.18632 1 1 1 0 1 4
T132 11781-11818 Sentence denotes MADQAMTQM 0.991227 1 0 1 0 1 3
T133 11819-11856 Sentence denotes LEAPFLYLY 0.983072 1 0 0 1 1 3
T134 11857-11894 Sentence denotes RTAPHGHVM 0.972153 1 0 1 0 1 3
T135 11895-11932 Sentence denotes IPFAMQMAY 0.961569 1 0 1 0 1 3
T136 11933-11970 Sentence denotes FLTENLLLY 0.951715 1 1 0 0 1 3
T137 11971-12008 Sentence denotes YLQPRTFLL 0.947743 1 1 0 0 1 3
T138 12009-12046 Sentence denotes MMISAGFSL 0.941318 0 1 1 0 1 3
T139 12047-12084 Sentence denotes ATLPKGIMM 0.926603 1 0 1 0 1 3
T140 12085-12094 Sentence denotes Figure 3.
T141 12096-12190 Sentence denotes De novo search of 9-mer 2019-nCoV peptides with MHC presentation and immunogenicity potential.
T142 12191-12359 Sentence denotes The MHC binding was predicted for HLA-A*02:01, HLA-A*01:01, HLA-B*07:02, HLA-B*40:01 and HLA-C*07:02 alleles by NetMHCpan 4.0 and immunogenicity was predicted by iPred.
T143 12361-12422 Sentence denotes Immunogenicity of 2019-nCoV peptides to 1G4 CD8+ TCR molecule
T144 12423-12584 Sentence denotes While our de novo candidates are appealing shortlisted targets for experimental validation, it does not provide information about target T cell receptors (TCRs).
T145 12585-12683 Sentence denotes We therefore set out to interrogate the possibility of cross reactivity with one well-studied TCR.
T146 12684-12805 Sentence denotes T cell cross-reactivity has been instrumental for the T cell immunity against both tumor antigens and external pathogens.
T147 12806-12979 Sentence denotes In that regard, a number of T cells have been extensively characterized including 1G4 CD8+ TCR, which is known to recognize the ‘SLLMWITQC’ peptide presented by HLA-A*02:01.
T148 12980-13141 Sentence denotes We therefore set out to leverage the data from a recently published study 7 and exploit the possibility of cross reactivity of this TCR to any 2019-nCoV peptide.
T149 13142-13428 Sentence denotes Here, we scanned all 9-mers from the 2019-nCoV proteome (9613 peptides) with Binding, Activating and Killing Position Weight Matrices (PWM, see the method section) and associated each peptide with the geometric mean of these three assays as a measure of immunogenicity (Data Table 4 4).
T150 13429-13574 Sentence denotes The distributions of binding, activation and killing scores along with their multiplicative score and geometric mean are illustrated in Figure 4.
T151 13575-13676 Sentence denotes Based on geometric mean, we observed 20 2019-nCoV peptides with a score > 0.8 and 516 peptides > 0.7.
T152 13677-13805 Sentence denotes The 9-mer peptides with geometric mean > 0.7 and positive HLA-A*02:01 binding prediction by NetMHCpan 4.0 are listed in Table 4.
T153 13806-13815 Sentence denotes Figure 4.
T154 13817-13896 Sentence denotes Distribution of 1G4 TCR positional weight matrix scores for 2019-nCoV peptides.
T155 13897-14048 Sentence denotes The positional weight matrices were obtained from 7 and 9613 9-mers generated from 10 2019-nCoV ORFs were computed for their TCR recognition potential.
T156 14049-14057 Sentence denotes Table 4.
T157 14059-14230 Sentence denotes 2019-nCoV 9-mer peptides with geometric mean ≥ 0.7 by 1G4 TCR positional weight matrix and predicted positive to bind HLA-A*02:01 by NetMHCpan 4.0 (Rank = NetMHCpan rank).
T158 14231-14309 Sentence denotes Peptide Binding score Activation score Killing score geoMean Rank Binder
T159 14310-14374 Sentence denotes RIMTWLDMV 0.866377428 0.853995 0.776303 0.831249 0.3481 SB
T160 14375-14438 Sentence denotes ALNTLVKQL 0.802453741 0.75073 0.785957 0.779413 0.6159 WB
T161 14439-14501 Sentence denotes LLLDRLNQL 0.809895414 0.7752 0.741096 0.774888 0.0423 SB
T162 14502-14566 Sentence denotes MIAQYTSAL 0.766262499 0.789511 0.749477 0.768242 0.9238 WB
T163 14567-14630 Sentence denotes VLSTFISAA 0.799672451 0.756117 0.687278 0.746239 0.536 WB
T164 14631-14695 Sentence denotes NVLAWLYAA 0.761297552 0.686117 0.739944 0.728423 1.4457 WB
T165 14696-14760 Sentence denotes RLANECAQV 0.783161706 0.719705 0.680504 0.726572 0.2049 SB
T166 14761-14825 Sentence denotes KLLKSIAAT 0.748896679 0.708996 0.697463 0.718118 1.0923 WB
T167 14826-14889 Sentence denotes QLSLPVLQV 0.70128376 0.715259 0.708405 0.708293 0.4768 SB
T168 14890-14954 Sentence denotes VQMAPISAM 0.729320768 0.698514 0.689612 0.705612 1.4677 WB
T169 14955-15017 Sentence denotes LLLTILTSL 0.7131709 0.715194 0.680064 0.702623 0.2712 SB
T170 15018-15081 Sentence denotes SVLLFLAFV 0.736972762 0.690855 0.679534 0.70202 1.1449 WB
T171 15082-15353 Sentence denotes LMWLIINLV 0.727847374 0.681119 0.694007 0.700717 1.304 WB We further analysed the MHC binding propensities and gathered peptides not only predicted positive by NetMHCpan but also to have leucine (L) and valine (V) in anchor positions 2 (P2) and 9 (P9) respectively.
T172 15354-15534 Sentence denotes Previous studies have shown that for MHC-I HLA-A02:01 specific peptides, 9-mer peptides with leucine at P2 and valine at P9 are preferably presented on the surface of HLA-A02:01 8.
T173 15535-15682 Sentence denotes Looking at the LV peptide, we identified 44 2019-nCoV peptides of which 2 peptides had immunogenicity score > 0.7 and 12 peptides > 0.6 ( Table 5).
T174 15683-15816 Sentence denotes Thus, here we provide the list of peptides that are potential targets for 1G4 TCR recognition for subjects with HLA-A02:01 haplotype.
T175 15817-15825 Sentence denotes Table 5.
T176 15827-15894 Sentence denotes 2019-nCoV 9-mer peptides having leucine-valine in anchor positions.
T177 15895-16100 Sentence denotes Peptides have geometric mean ≥ 0.6 and ≤ 0.7 (for those ≥ 0.7, refer to Table 4) by 1G4 TCR positional weight matrix and predicted positive for HLA-A*02:01 binding by NetMHCpan 4.0 (Rank = NetMHCpan rank).
T178 16101-16179 Sentence denotes Peptide Binding score Activation score Killing score geoMean Rank Binder
T179 16180-16241 Sentence denotes TLMNVLTLV 0.723687 0.658986 0.652178 0.677534 0.0444 SB
T180 16242-16303 Sentence denotes QLEMELTPV 0.711291 0.651003 0.608605 0.655625 1.6769 WB
T181 16304-16364 Sentence denotes MLAKALRKV 0.668756 0.610664 0.65968 0.645854 0.3524 SB
T182 16365-16426 Sentence denotes GLFKDCSKV 0.675952 0.632375 0.594753 0.633494 0.2677 SB
T183 16427-16488 Sentence denotes ALSKGVHFV 0.652549 0.604952 0.586236 0.613954 0.0425 SB
T184 16489-16550 Sentence denotes YLNTLTLAV 0.624147 0.610826 0.575445 0.603119 0.0453 SB
T185 16552-16562 Sentence denotes Discussion
T186 16563-16724 Sentence denotes In this study we provide a profile of computationally predicted immunogenic peptides from 2019-nCoV for functional validation and potential vaccine developments.
T187 16725-16859 Sentence denotes We are fully aware that an effective vaccine development will require a very thorough investigation of immune correlates to 2019-nCoV.
T188 16860-17028 Sentence denotes However, due to the emergency and severity of the outbreak as well as the lack of access to samples from infected subjects, such approaches would not serve the urgency.
T189 17029-17235 Sentence denotes Therefore, computational prediction is instrumental for guiding biologists towards a quick and cost-effective solution to prevent the spread and ultimately help eliminate the infection from the individuals.
T190 17236-17376 Sentence denotes With a rising global concern of novel coronavirus outbreak, numerous research groups have started to investigate and publish their findings.
T191 17377-17533 Sentence denotes At the time of preparing this manuscript, we became aware of a similar study conducted in comparing 2019-nCoV proteome with SARS CoV immunogenic peptides 9.
T192 17534-17770 Sentence denotes Our in silico approach takes the search beyond presenting only common immunogenic peptide between SARS and 2019-nCoV and provides the experimental community with a more comprehensive list including de novo and cross reactive candidates.
T193 17771-17972 Sentence denotes On the other hand, considering the fact that two studies have been accomplished independently with distinct approaches, this serves to demonstrate a high level of confidence in reproducing the results.
T194 17973-18123 Sentence denotes Reproducibility of computational prediction is always of high importance and becomes even more significant under urgent scenarios as of this outbreak.
T195 18124-18279 Sentence denotes Our study also suggests the need for further efforts to develop accurate predictive models and algorithms for the characterization of immunogenic peptides.
T196 18280-18627 Sentence denotes In this study, we provide potential immunogenic peptides from 2019-nCoV for vaccine targets that i) have been characterized immunogenic by previous studies on SARS CoV, ii) have high degree of similarity with immunogenic SARS CoV peptides and iii) are predicted immunogenic by combination of NetMHCpan and iPred/1G4 TCR positional weight matrices.
T197 18628-18751 Sentence denotes Given the limited time and resources, our work serves as a guide to save time and cost for further experimental validation.
T198 18753-18759 Sentence denotes Method
T199 18761-18777 Sentence denotes Data acquisition
T200 18778-18857 Sentence denotes 2019-nCoV open reading frame sequences were downloaded from NCBI ( MN908947.3).
T201 18858-18930 Sentence denotes All sequences subjected for analysis are deposited in GitHub repository.
T202 18932-18945 Sentence denotes Data analysis
T203 18946-19001 Sentence denotes All subsequent analyses have been conducted in R 3.6.1.
T204 19003-19033 Sentence denotes Sequence similarity comparison
T205 19034-19255 Sentence denotes The sequence similarity between 2019-nCoV open reading frames and previously characterized immunogenic peptides in IEDB was analysed by local alignment using R ‘pairwiseAlignment’ function from Biostrings v2.40.2 package.
T206 19256-19340 Sentence denotes The local alignment utilized BLOSUM62 matrix, gapOpening of 5 and gapExtension of 5.
T207 19341-19405 Sentence denotes The alignment score was normalized by length of target peptides.
T208 19406-19565 Sentence denotes In extracting peptides with the exact sequence alignment with epitope sequences in IEDB, only peptides with more than 3 amino acids in length were shortlisted.
T209 19567-19592 Sentence denotes Immunogenicity prediction
T210 19593-19662 Sentence denotes We have used iPred 5 to predict immunogenicity of each given peptide.
T211 19663-19880 Sentence denotes Briefly, iPred employs peptides’ length and physicochemical properties of amino acids modelled by sums of ten Kidera factors and associates a score to each peptide reflecting its likelihood of recognition by a T cell.
T212 19882-19913 Sentence denotes Predicting presentation by MHCs
T213 19914-19980 Sentence denotes In order to predict peptide binding to MHC we used NetMHCpan V4 6.
T214 19981-20192 Sentence denotes This version of NetMHCpan that comes with a number of improvements, incorporate both eluted ligand and peptide binding affinity data into a neural network model to predict MHC presentation of each given peptide.
T215 20194-20232 Sentence denotes Predicting cross reactivity to 1G4 TCR
T216 20233-20369 Sentence denotes To gauge the level of 1G4 TCR cross-reactivity to list of 2019-nCoV virus, we have leveraged the data from a recently published study 7.
T217 20370-20518 Sentence denotes 1G4 or NY-ESO-1-specific TCR is a very well-studied and clinically efficacious TCR which recognize the peptide ‘SLLMWITQC’ presented by HLA-A*02:01.
T218 20519-20725 Sentence denotes Karapetyan et al. have recently provided data from three experimental assays reflecting Binding, Activating and Killing upon each mutation at each position of all possible 9-mers using these three datasets.
T219 20726-20881 Sentence denotes In a similar way to the original paper, we trained three Position Weight Matrices named B, A and K respectively from Binding, Activating and Killing assay.
T220 20882-20982 Sentence denotes We defined the cross-reactivity score of a given 9-mer sequence as the geometric mean of B, A and K.
T221 20983-21126 Sentence denotes We then scanned 2019-nCoV virus protein sequence with each of B, A and K PWMs and associated each of 9613 9-mers with a cross reactivity score.
T222 21127-21215 Sentence denotes At the same we utilized NetMHCpan and associated each 9-mer with its presentation score.
T223 21216-21414 Sentence denotes Our final list of cross-reactive candidate peptides were those with a cross-reactivity sore >= 0.8 and reported as strong binders from NetMHCpan and have ‘L’ and ‘V’ amino acids at anchor positions.
T224 21415-21502 Sentence denotes The custom R codes are accessible from GitHub repository (see software availability 4).
T225 21504-21525 Sentence denotes Software availability
T226 21526-21603 Sentence denotes Replication code: https://github.com/ChloeHJ/Vaccine-target-for-2019-nCoV.git
T227 21604-21688 Sentence denotes Archived source code at time of publication: http://doi.org/10.5281/zenodo.3676908 4
T228 21689-21697 Sentence denotes License:
T229 21698-21744 Sentence denotes Creative Commons Attribution 4.0 International
T230 21746-21763 Sentence denotes Data availability
T231 21765-21776 Sentence denotes Source data
T232 21777-21856 Sentence denotes 2019-nCoV open reading frame sequences were downloaded from NCBI ( MN908947.3).
T233 21858-21873 Sentence denotes Underlying data
T234 21874-21881 Sentence denotes Zenodo:
T235 21882-21995 Sentence denotes In silico identification of vaccine targets for 2019-nCoV (Data tables). http://doi.org/10.5281/zenodo.3676886 10
T236 21996-22209 Sentence denotes This project contains the following underlying data: – Table1 nCoV peptides having exact match with immunogenic SARS CoV peptides.xlsx (Table of nCoV peptides having exact match with immunogenic SARS CoV peptides)
T237 22210-22378 Sentence denotes – Table2 nCoV peptides with high sequence similarity with immunogenic IEDB peptides.csv (Table of peptides with high sequence similarity with immunogenic IEDB peptides)
T238 22379-22567 Sentence denotes – Table3 de novo search on 9-mer nCoV for immunogenic peptides by NetMHCpan and iPred.csv (Table of results of de novo search on 9-mer nCoV for immunogenic peptides by NetMHCpan and iPred)
T239 22568-22753 Sentence denotes – Table4 de novo search on 9-mer nCoV for immunogenic peptides by NetMHCpan and PWM.xlsx (Table of results of de novo search on 9-mer nCoV for immunogenic peptides by NetMHCpan and PWM)
T240 22754-22863 Sentence denotes Data are available under the terms of the Creative Commons Attribution 4.0 International license (CC-BY 4.0).
T241 22865-22881 Sentence denotes Acknowledgements
T242 22882-23048 Sentence denotes We appreciate assistance and computing support from Human Immunology Unit and WIMM Centre for Computational Biology at MRC Weatherall Institute of Molecular Medicine.
T243 23049-23060 Sentence denotes We thank G.
T244 23061-23078 Sentence denotes Napolitani and M.
T245 23079-23130 Sentence denotes Salio for insightful discussions about the project.

MyTest

Id Subject Object Predicate Lexical cue
32269766-32035507-30420969 1906-1907 32035507 denotes 2
32269766-30357391-30420970 3599-3600 30357391 denotes 3
32269766-30144804-30420971 7479-7481 30144804 denotes 5
32269766-28978689-30420972 10606-10608 28978689 denotes 6
32269766-31695703-30420973 13054-13056 31695703 denotes 7
32269766-31695703-30420974 13947-13949 31695703 denotes 7
32269766-1709722-30420975 15532-15533 1709722 denotes 8
32269766-30144804-30420976 19612-19614 30144804 denotes 5
32269766-28978689-30420977 19978-19979 28978689 denotes 6
32269766-31695703-30420978 20367-20368 31695703 denotes 7

2_test

Id Subject Object Predicate Lexical cue
32269766-32035507-30420969 1906-1907 32035507 denotes 2
32269766-30357391-30420970 3599-3600 30357391 denotes 3
32269766-30144804-30420971 7479-7480 30144804 denotes 5
32269766-28978689-30420972 10606-10607 28978689 denotes 6
32269766-31695703-30420973 13054-13055 31695703 denotes 7
32269766-31695703-30420974 13947-13948 31695703 denotes 7
32269766-1709722-30420975 15532-15533 1709722 denotes 8
32269766-30144804-30420976 19612-19613 30144804 denotes 5
32269766-28978689-30420977 19978-19979 28978689 denotes 6
32269766-31695703-30420978 20367-20368 31695703 denotes 7