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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 32-35 Gene denotes NS8 Gene:6016
31 1300-1318 Gene denotes Orf1ab polyprotein Gene:43740578
32 1320-1332 Gene denotes Nucleocapsid Gene:43740575
33 1366-1374 Gene denotes Membrane Gene:43740571
34 1510-1513 Gene denotes NS8 Gene:6016
35 1604-1607 Gene denotes NS8 Gene:6016
36 1784-1787 Gene denotes NS8 Gene:6016
37 137-142 Species denotes human Tax:9606
38 153-168 Species denotes Betacoronavirus Tax:694002
39 192-214 Species denotes 2019 novel coronavirus Tax:2697049
40 216-225 Species denotes 2019-nCoV Tax:2697049
41 293-302 Species denotes 2019-nCoV Tax:2697049
42 317-322 Species denotes human Tax:9606
43 351-362 Species denotes coronavirus Tax:11118
44 460-469 Species denotes 2019-nCoV Tax:2697049
45 681-690 Species denotes 2019-nCoV Tax:2697049
46 792-801 Species denotes 2019-nCoV Tax:2697049
47 878-887 Species denotes 2019-nCoV Tax:2697049
48 969-984 Species denotes Betacoronavirus Tax:694002
49 1000-1016 Species denotes SARS coronavirus Tax:694009
50 1021-1046 Species denotes Bat-SARS-like coronavirus Tax:1508227
51 1120-1129 Species denotes 2019-nCoV Tax:2697049
52 1196-1205 Species denotes 2019-nCoV Tax:2697049
53 1548-1557 Species denotes 2019-nCoV Tax:2697049
54 1590-1593 Species denotes Cov Tax:11118
55 1678-1686 Species denotes SARS-CoV Tax:694009
56 1863-1868 Species denotes human Tax:9606
57 1891-1900 Species denotes 2019-nCoV Tax:2697049
58 181-190 Disease denotes pneumonia MESH:D011014
59 323-342 Disease denotes respiratory illness MESH:D012140
61 1917-1926 Species denotes 2019-nCoV Tax:2697049
64 1972-1981 Species denotes 2019-nCoV Tax:2697049
65 2018-2033 Species denotes Betacoronavirus Tax:694002
67 2105-2114 Species denotes 2019-nCoV Tax:2697049
70 2156-2159 Gene denotes NS8 Gene:6016
71 2185-2194 Species denotes 2019-nCoV Tax:2697049
80 2243-2260 Species denotes human coronavirus Tax:694448
81 2269-2291 Species denotes 2019 novel coronavirus Tax:2697049
82 2293-2302 Species denotes 2019-nCoV Tax:2697049
83 2307-2354 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
84 2356-2366 Species denotes SARS-CoV-2 Tax:2697049
85 2466-2475 Species denotes 2019-nCoV Tax:2697049
86 2437-2447 Disease denotes infections MESH:D007239
87 2452-2458 Disease denotes deaths MESH:D003643
95 2605-2618 Species denotes Coronaviruses Tax:11118
96 2681-2687 Species denotes humans Tax:9606
97 2853-2866 Species denotes Coronaviruses Tax:11118
98 3000-3015 Species denotes Betacoronavirus Tax:694002
99 3089-3104 Species denotes Betacoronavirus Tax:694002
100 2721-2730 Disease denotes infection MESH:D007239
101 2784-2805 Disease denotes neurological diseases MESH:D020271
133 3379-3384 Species denotes human Tax:9606
134 3385-3398 Species denotes coronaviruses Tax:11118
135 3399-3421 Species denotes human coronavirus NL63 Tax:277944
136 3423-3432 Species denotes HCoV-NL63 Tax:277944
137 3435-3457 Species denotes human coronavirus 229E Tax:11137
138 3459-3468 Species denotes HCoV-229E Tax:11137
139 3471-3493 Species denotes human coronavirus OC43 Tax:31631
140 3495-3504 Species denotes HCoV-OC43 Tax:31631
141 3511-3533 Species denotes human coronavirus HKU1 Tax:290028
142 3635-3642 Species denotes infants Tax:9606
143 3717-3723 Species denotes humans Tax:9606
144 3761-3766 Species denotes human Tax:9606
145 3788-3796 Species denotes SARS-CoV Tax:694009
146 3801-3856 Species denotes Middle East respiratory syndrome coronavirus (MERS-CoV) Tax:1335626
147 3870-3883 Species denotes coronaviruses Tax:11118
148 3930-3936 Species denotes humans Tax:9606
149 3953-3968 Species denotes Betacoronavirus Tax:694002
150 4069-4078 Species denotes 2019-nCoV Tax:2697049
151 4094-4105 Species denotes coronavirus Tax:11118
152 4130-4136 Species denotes humans Tax:9606
153 4266-4275 Species denotes 2019-nCoV Tax:2697049
154 4394-4403 Species denotes 2019-nCoV Tax:2697049
155 4454-4469 Species denotes bat coronavirus Tax:1508220
156 3348-3357 Disease denotes infection MESH:D007239
157 3616-3626 Disease denotes infections MESH:D007239
158 3767-3786 Disease denotes zoonotic infections MESH:D015047
159 3861-3869 Disease denotes zoonotic MESH:D015047
160 3906-3926 Disease denotes respiratory diseases MESH:D012140
161 4154-4173 Disease denotes respiratory disease MESH:D012140
162 4177-4199 Disease denotes respiratory infections MESH:D012141
163 4306-4314 CellLine denotes MN908947 CVCL:U508
178 4539-4548 Species denotes 2019-nCoV Tax:2697049
179 4701-4710 Species denotes 2019-nCoV Tax:2697049
180 4775-4784 Species denotes 2019-nCoV Tax:2697049
181 4803-4816 Species denotes coronaviruses Tax:11118
182 4911-4920 Species denotes 2019-nCoV Tax:2697049
183 5038-5046 Species denotes SARS-CoV Tax:694009
184 5051-5059 Species denotes MERS-CoV Tax:1335626
185 5112-5121 Species denotes 2019-nCoV Tax:2697049
186 5217-5226 Species denotes 2019-nCoV Tax:2697049
187 5232-5240 Species denotes SARS-CoV Tax:694009
188 5245-5253 Species denotes MERS-CoV Tax:1335626
189 5261-5270 Species denotes 2019-nCoV Tax:2697049
190 5303-5308 Species denotes human Tax:9606
191 5309-5324 Species denotes Betacoronavirus Tax:694002
194 5439-5448 Species denotes 2019-nCoV Tax:2697049
195 5694-5703 Species denotes 2019-nCoV Tax:2697049
200 6239-6264 Species denotes Bat SARS-like coronavirus Tax:1508227
201 6303-6310 Species denotes BetaCoV Tax:694002
202 6435-6452 Species denotes yellow head virus Tax:96029
203 6817-6826 Disease denotes RAxML-HPC MESH:C537262
211 8049-8052 Gene denotes NS8 Gene:6016
212 7286-7295 Species denotes 2019-nCoV Tax:2697049
213 7598-7607 Species denotes 2019-nCoV Tax:2697049
214 8140-8156 Species denotes SARS coronavirus Tax:694009
215 8218-8227 Species denotes 2019-nCoV Tax:2697049
216 8324-8330 Disease denotes DICHOT
217 7365-7373 CellLine denotes MN996527 CVCL:U508
245 8805-8814 Species denotes 2019-nCoV Tax:2697049
246 8906-8921 Species denotes Betacoronavirus Tax:694002
247 8937-8953 Species denotes SARS coronavirus Tax:694009
248 8958-8983 Species denotes Bat-SARS-like coronavirus Tax:1508227
249 9100-9135 Species denotes Bat Hp-betacoronavirus/Zhejiang2013 Tax:2501961
250 9209-9224 Species denotes Betacoronavirus Tax:694002
251 9309-9317 Species denotes MERS-CoV Tax:1335626
252 9475-9484 Species denotes 2019-nCoV Tax:2697049
253 9565-9590 Species denotes Bat SARS-like coronavirus Tax:1508227
254 9596-9603 Species denotes BetaCoV Tax:694002
255 9623-9639 Species denotes SARS coronavirus Tax:694009
256 9653-9659 Species denotes humans Tax:9606
257 9681-9690 Species denotes 2019-nCoV Tax:2697049
258 10051-10057 Species denotes humans Tax:9606
259 10092-10100 Species denotes SARS-CoV Tax:694009
260 10105-10113 Species denotes MERS-CoV Tax:1335626
261 10127-10144 Species denotes masked palm civet Tax:9675
262 10146-10160 Species denotes Paguma larvata Tax:9675
263 10166-10175 Species denotes dromedary Tax:9838
264 10176-10181 Species denotes camel Tax:9838
265 10183-10202 Species denotes Camelus dromedarius Tax:9838
266 10272-10285 Species denotes coronaviruses Tax:11118
267 10399-10408 Species denotes 2019-nCoV Tax:2697049
268 10511-10520 Species denotes 2019-nCoV Tax:2697049
269 10555-10564 Species denotes 2019-nCoV Tax:2697049
270 10323-10334 Disease denotes coinfection MESH:D060085
271 10647-10656 Disease denotes pressures MESH:D006973
275 13147-13156 Species denotes 2019-nCoV Tax:2697049
276 13347-13356 Species denotes 2019-nCoV Tax:2697049
277 13837-13846 Species denotes 2019-nCoV Tax:2697049
297 11894-11912 Gene denotes Orf1ab polyprotein Gene:43740578
298 11914-11926 Gene denotes Nucleocapsid Gene:43740575
299 11978-11983 Gene denotes Spike Gene:43740568
300 11988-11993 Gene denotes Orf1a Gene:43740578
301 12226-12244 Gene denotes Orf1ab polyprotein Gene:43740578
302 13037-13040 Gene denotes NS8 Gene:6016
303 12864-12867 Gene denotes NS6 Gene:4893
304 12859-12862 Gene denotes NS3 Gene:3845
305 12640-12643 Gene denotes NS8 Gene:6016
306 11211-11220 Species denotes 2019-nCoV Tax:2697049
307 11245-11258 Species denotes coronaviruses Tax:11118
308 11516-11525 Species denotes 2019-nCoV Tax:2697049
309 11713-11722 Species denotes 2019-nCoV Tax:2697049
310 12005-12014 Species denotes 2019-nCoV Tax:2697049
311 12109-12120 Species denotes coronavirus Tax:11118
312 12694-12703 Species denotes 2019-nCoV Tax:2697049
313 12755-12780 Species denotes Bat-SARS-like coronavirus Tax:1508227
314 12905-12921 Species denotes SARS coronavirus Tax:694009
315 13089-13098 Species denotes 2019-nCoV Tax:2697049
348 14328-14334 Gene denotes ORF 7b Gene:43740574
349 14506-14512 Gene denotes ORF 7b Gene:43740574
350 14745-14751 Gene denotes ORF 8b Gene:19910005
351 14848-14854 Gene denotes ORF 8b Gene:19910005
352 14880-14888 Gene denotes INF-beta Gene:3451
353 14906-14911 Gene denotes ORF4b Gene:14254597
354 14942-14945 Gene denotes IFN Gene:3439
355 15036-15041 Gene denotes INF-β Gene:3451
356 15188-15192 Gene denotes IRF3 Gene:3661
357 15278-15284 Gene denotes ORF 8b Gene:19910005
358 15376-15381 Gene denotes NF-κB Gene:4790
359 15395-15401 Gene denotes ORF 8b Gene:19910005
360 15421-15442 Gene denotes TANK-binding kinase 1 Gene:29110
361 15465-15470 Gene denotes NF-κB Gene:4790
362 15513-15517 Gene denotes IRF3 Gene:105100198
363 15635-15638 Gene denotes NS8 Gene:6016
364 14008-14011 Gene denotes NS8 Gene:6016
365 14015-14024 Species denotes 2019-nCoV Tax:2697049
366 14045-14070 Species denotes Bat-SARS-like coronavirus Tax:1508227
367 14128-14136 Species denotes SARS-CoV Tax:694009
368 14231-14239 Species denotes SARS-CoV Tax:694009
369 14626-14635 Species denotes 2019-nCoV Tax:2697049
370 14651-14656 Species denotes human Tax:9606
371 14774-14782 Species denotes SARS-CoV Tax:694009
372 14824-14832 Species denotes MERS-CoV Tax:1335626
373 15010-15018 Species denotes SARS-CoV Tax:694009
374 15247-15255 Species denotes MERS-CoV Tax:1335626
375 15270-15276 Species denotes camels Tax:9838
376 15643-15652 Species denotes 2019-nCoV Tax:2697049
377 15686-15692 Species denotes humans Tax:9606
378 14365-14368 Gene denotes IFN Gene:3439
379 15297-15305 Disease denotes melanoma MESH:D008545
382 16672-16681 Species denotes 2019-nCoV Tax:2697049
383 16743-16752 Species denotes 2019-nCoV Tax:2697049
387 16486-16495 Species denotes 2019-nCoV Tax:2697049
388 16516-16541 Species denotes Bat-SARS-like coronavirus Tax:1508227
389 15969-15975 Disease denotes DICHOT
396 17007-17010 Gene denotes NS8 Gene:6016
397 16926-16935 Species denotes 2019-nCoV Tax:2697049
398 16940-16948 Species denotes SARS-CoV Tax:694009
399 16969-16978 Species denotes 2019-nCoV Tax:2697049
400 17154-17163 Species denotes 2019-nCoV Tax:2697049
401 17188-17203 Species denotes bat coronavirus Tax:1508220

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 14-22 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T2 448-456 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T3 557-563 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T4 691-699 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T5 780-788 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T6 1094-1102 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T7 1130-1137 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T8 1152-1158 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T9 1206-1214 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T10 1258-1266 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T11 1333-1340 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T12 1348-1360 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T13 1375-1382 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T14 1406-1414 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T15 1491-1499 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T16 1788-1796 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T17 2160-2168 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T18 2633-2636 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T19 2766-2771 Body_part denotes bowel http://purl.org/sig/ont/fma/fma7199
T20 2773-2778 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T21 4247-4253 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T22 4435-4441 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T23 4785-4792 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T24 5427-5435 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T25 5569-5575 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T26 5704-5712 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T27 5730-5737 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T28 5761-5767 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T29 5772-5779 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T30 5892-5899 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T31 6082-6089 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T32 6217-6223 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T33 6442-6446 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T34 6517-6523 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T35 7265-7272 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T36 7347-7353 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T37 7421-7427 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T38 7550-7558 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T39 7608-7616 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T40 7631-7637 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T41 7724-7731 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T42 7746-7757 Body_part denotes amino acids http://purl.org/sig/ont/fma/fma82739
T43 7759-7761 Body_part denotes aa http://purl.org/sig/ont/fma/fma82739
T44 7772-7774 Body_part denotes aa http://purl.org/sig/ont/fma/fma82739
T45 7851-7859 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T46 8029-8036 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T47 8233-8240 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T48 8454-8461 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T49 8776-8782 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T50 10134-10138 Body_part denotes palm http://purl.org/sig/ont/fma/fma24920
T51 10683-10686 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T52 11180-11186 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T53 11187-11197 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T54 11526-11534 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T55 11723-11731 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T56 11833-11841 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T57 11927-11934 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T58 11942-11954 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T59 11969-11976 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T60 12209-12221 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T61 12429-12437 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T62 12471-12479 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T63 12523-12530 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T64 12557-12565 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T65 12667-12675 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T66 12849-12857 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T67 13007-13015 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T68 13157-13165 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T69 13335-13343 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T70 13659-13667 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T71 14158-14165 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T72 14189-14200 Body_part denotes compartment http://purl.org/sig/ont/fma/fma76577
T73 14206-14213 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T74 14389-14393 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T75 14721-14731 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T76 14987-14995 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T77 15333-15340 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T78 15616-15624 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T79 15943-15953 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T80 16069-16076 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T81 16327-16332 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T82 16436-16443 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T83 16696-16703 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T84 16722-16729 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T85 16767-16774 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T86 16808-16813 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T87 16824-16831 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T88 16864-16872 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T89 16988-16996 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 2773-2778 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T2 6442-6446 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033
T3 16327-16332 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488
T4 16808-16813 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488

LitCovid_AGAC

Id Subject Object Predicate Lexical cue
p63507s17 14353-14363 MPA denotes interferon
p63507s29 14416-14425 CPA denotes apoptosis
p63509s7 14513-14520 PosReg denotes enhance
p63509s9 14527-14533 MPA denotes growth

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 32-35 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143
T2 181-190 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T3 1000-1004 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T4 1025-1029 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T5 1510-1513 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143
T6 1604-1607 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143
T7 1678-1686 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 1784-1787 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143
T9 2156-2159 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143
T10 2307-2354 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T11 2307-2340 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T12 2356-2364 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T13 2437-2447 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T14 2721-2730 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T15 2784-2805 Disease denotes neurological diseases http://purl.obolibrary.org/obo/MONDO_0005071
T16 3348-3357 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T17 3616-3629 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T18 3767-3786 Disease denotes zoonotic infections http://purl.obolibrary.org/obo/MONDO_0025481
T19 3788-3796 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T20 3906-3926 Disease denotes respiratory diseases http://purl.obolibrary.org/obo/MONDO_0005087
T21 4154-4173 Disease denotes respiratory disease http://purl.obolibrary.org/obo/MONDO_0005087
T22 4177-4199 Disease denotes respiratory infections http://purl.obolibrary.org/obo/MONDO_0024355
T23 5038-5046 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T24 5232-5240 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T25 6243-6247 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T26 6823-6826 Disease denotes HPC http://purl.obolibrary.org/obo/MONDO_0008185
T27 8038-8040 Disease denotes NS http://purl.obolibrary.org/obo/MONDO_0009735
T28 8049-8052 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143
T29 8140-8144 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T30 8937-8941 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T31 8962-8966 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T32 9569-9573 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T33 9623-9627 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T34 10092-10100 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T35 12640-12643 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143
T36 12759-12763 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T37 12859-12862 Disease denotes NS3 http://purl.obolibrary.org/obo/MONDO_0012371
T38 12864-12867 Disease denotes NS6 http://purl.obolibrary.org/obo/MONDO_0013186
T39 12905-12909 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T40 13037-13040 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143
T41 14008-14011 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143
T42 14049-14053 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T43 14128-14136 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T44 14231-14239 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T45 14774-14782 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T46 15010-15018 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T47 15297-15305 Disease denotes melanoma http://purl.obolibrary.org/obo/MONDO_0005105
T48 15635-15638 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143
T49 16520-16524 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T50 16940-16948 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T51 17007-17010 Disease denotes NS8 http://purl.obolibrary.org/obo/MONDO_0014143

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 137-142 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T2 317-322 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T3 512-513 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T4 575-576 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T5 677-680 http://purl.obolibrary.org/obo/CLO_0050884 denotes ten
T6 1192-1195 http://purl.obolibrary.org/obo/CLO_0050884 denotes ten
T7 1237-1238 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 1366-1374 http://purl.obolibrary.org/obo/UBERON_0000158 denotes Membrane
T9 1661-1670 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T10 1863-1868 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T11 2115-2120 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T12 2243-2248 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T13 2637-2644 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T14 2681-2687 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T15 2773-2778 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T16 2773-2778 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T17 3379-3384 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T18 3399-3404 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T19 3435-3440 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T20 3471-3476 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T21 3511-3516 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T22 3591-3598 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T23 3705-3712 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T24 3717-3723 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T25 3730-3737 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T26 3742-3743 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T27 3761-3766 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T28 3930-3936 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T29 4130-4136 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T30 4452-4453 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T31 4454-4457 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T32 4876-4881 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T33 5022-5027 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T34 5180-5181 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T35 5303-5308 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T36 5509-5510 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 5690-5693 http://purl.obolibrary.org/obo/CLO_0050884 denotes ten
T38 5811-5812 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T39 6311-6314 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T40 6442-6446 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T41 6442-6446 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head
T42 6447-6452 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T43 6740-6741 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T44 6944-6945 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T45 6994-6995 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T46 7385-7386 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T47 7651-7652 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T48 7681-7682 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T49 7759-7761 http://purl.obolibrary.org/obo/CLO_0001627 denotes aa
T50 7772-7774 http://purl.obolibrary.org/obo/CLO_0001627 denotes aa
T51 7880-7881 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T52 7914-7915 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T53 8530-8534 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T54 8677-8681 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T55 9104-9106 http://purl.obolibrary.org/obo/UBERON_0000007 denotes Hp
T56 9318-9321 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T57 9529-9532 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T58 9653-9659 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T59 9719-9723 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T60 9794-9795 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 9819-9822 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T62 9940-9944 http://purl.obolibrary.org/obo/PR_000001318 denotes sell
T63 9945-9949 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T64 9963-9966 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T65 9999-10005 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T66 10019-10024 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T67 10043-10047 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T68 10051-10057 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T69 10176-10181 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camel
T70 10336-10337 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T71 10374-10375 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T72 10469-10470 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T73 11062-11063 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T74 11332-11333 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T75 11414-11415 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T76 11512-11515 http://purl.obolibrary.org/obo/CLO_0050884 denotes ten
T77 11584-11585 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T78 11780-11781 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T79 11812-11813 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T80 11960-11968 http://purl.obolibrary.org/obo/UBERON_0000158 denotes Membrane
T81 12864-12867 http://purl.obolibrary.org/obo/OGG_3000004893 denotes NS6
T82 13557-13558 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T83 13604-13605 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T84 13672-13675 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T85 13816-13817 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T86 14389-14393 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T87 14521-14526 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T88 14651-14656 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T89 14683-14688 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T90 14752-14755 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T91 14806-14807 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T92 15042-15051 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T93 15208-15212 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T94 15236-15243 http://purl.obolibrary.org/obo/CLO_0009985 denotes focused
T95 15261-15265 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T96 15270-15276 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camels
T97 15373-15374 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T98 15380-15381 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T99 15383-15393 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T100 15469-15470 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T101 15471-15480 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T102 15492-15493 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T103 15527-15538 http://purl.obolibrary.org/obo/CLO_0001658 denotes activations
T104 15686-15692 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T105 15760-15761 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T106 15768-15775 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T107 15792-15793 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T108 15861-15862 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T109 15869-15876 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T110 16060-16064 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T111 16067-16068 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T112 16953-16961 http://purl.obolibrary.org/obo/CLO_0009985 denotes focusing
T113 17024-17025 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T114 17112-17117 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T115 17188-17191 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T116 17295-17300 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 14-22 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T2 448-456 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T3 691-699 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T4 780-788 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T5 1094-1102 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T6 1130-1137 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T7 1206-1214 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T8 1239-1244 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T9 1258-1266 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T10 1333-1340 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T11 1348-1360 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T12 1375-1382 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T13 1406-1414 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T14 1491-1499 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T15 1788-1796 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T16 2160-2168 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T17 4360-4362 Chemical denotes Lu http://purl.obolibrary.org/obo/CHEBI_33382
T18 4569-4571 Chemical denotes Lu http://purl.obolibrary.org/obo/CHEBI_33382
T19 5326-5328 Chemical denotes Lu http://purl.obolibrary.org/obo/CHEBI_33382
T20 5427-5435 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T21 5704-5712 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T22 5772-5779 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T23 6018-6020 Chemical denotes ID http://purl.obolibrary.org/obo/CHEBI_141439
T24 6996-7001 Chemical denotes gamma http://purl.obolibrary.org/obo/CHEBI_30212
T25 7128-7130 Chemical denotes NG http://purl.obolibrary.org/obo/CHEBI_28787|http://purl.obolibrary.org/obo/CHEBI_73422
T27 7265-7272 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T28 7550-7558 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T29 7608-7616 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T30 7724-7731 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T31 7746-7757 Chemical denotes amino acids http://purl.obolibrary.org/obo/CHEBI_33709
T32 7746-7751 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T33 7752-7757 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T34 7759-7761 Chemical denotes aa http://purl.obolibrary.org/obo/CHEBI_33709
T35 7772-7774 Chemical denotes aa http://purl.obolibrary.org/obo/CHEBI_33709
T36 7851-7859 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T37 8029-8036 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T38 8038-8040 Chemical denotes NS http://purl.obolibrary.org/obo/CHEBI_73426
T39 8233-8240 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T40 8454-8461 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T41 8646-8650 Chemical denotes MEGA http://purl.obolibrary.org/obo/CHEBI_6617
T42 8989-8991 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T43 9009-9011 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T44 9104-9106 Chemical denotes Hp http://purl.obolibrary.org/obo/CHEBI_24526
T45 10245-10247 Chemical denotes Lu http://purl.obolibrary.org/obo/CHEBI_33382
T46 11187-11197 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T47 11260-11262 Chemical denotes Lu http://purl.obolibrary.org/obo/CHEBI_33382
T48 11526-11534 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T49 11723-11731 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T50 11814-11819 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T51 11833-11841 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T52 11927-11934 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T53 11942-11954 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T54 11969-11976 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T55 12130-12132 Chemical denotes Lu http://purl.obolibrary.org/obo/CHEBI_33382
T56 12209-12221 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T57 12429-12437 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T58 12471-12479 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T59 12523-12530 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T60 12557-12565 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T61 12667-12675 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T62 12786-12788 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T63 12806-12808 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T64 12849-12857 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T65 13007-13015 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T66 13157-13165 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T67 13335-13343 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T68 13659-13667 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T69 14158-14165 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T70 14206-14213 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T71 14353-14363 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T72 14365-14368 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T73 14441-14444 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T74 14721-14731 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T75 14884-14888 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T76 14942-14945 Chemical denotes IFN http://purl.obolibrary.org/obo/CHEBI_52999
T77 14987-14995 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T78 15070-15080 Chemical denotes interferon http://purl.obolibrary.org/obo/CHEBI_52999
T79 15333-15340 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T80 15376-15378 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T83 15465-15467 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T86 15616-15624 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T87 15768-15775 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T88 15869-15876 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T89 15943-15953 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T90 15943-15948 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T91 15949-15953 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T92 16069-16076 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T93 16436-16443 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T94 16557-16559 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T95 16577-16579 Chemical denotes SL http://purl.obolibrary.org/obo/CHEBI_74815
T96 16696-16703 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T97 16722-16729 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T98 16767-16774 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T99 16824-16831 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T100 16864-16872 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T101 16988-16996 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T102 17439-17441 Chemical denotes ID http://purl.obolibrary.org/obo/CHEBI_141439

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 181-190 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T2 323-342 Phenotype denotes respiratory illness http://purl.obolibrary.org/obo/HP_0002086
T3 3609-3626 Phenotype denotes severe infections http://purl.obolibrary.org/obo/HP_0032169
T4 4177-4199 Phenotype denotes respiratory infections http://purl.obolibrary.org/obo/HP_0011947
T5 15297-15305 Phenotype denotes melanoma http://purl.obolibrary.org/obo/HP_0002861

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 1645-1660 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T2 1661-1670 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T3 10290-10298 http://purl.obolibrary.org/obo/GO_0015297 denotes exchange
T4 14158-14175 http://purl.obolibrary.org/obo/GO_0008104 denotes protein localized
T5 14389-14404 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T6 14416-14425 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T7 14416-14425 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T8 14527-14533 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T9 15042-15059 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T10 15042-15051 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T11 15070-15091 http://purl.obolibrary.org/obo/GO_0001816 denotes interferon production
T12 15148-15159 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T13 15471-15480 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-108 Sentence denotes Nonstructural proteins NS7b and NS8 are likely to be phylogenetically associated with evolution of 2019-nCoV
T2 110-118 Sentence denotes Abstract
T3 119-254 Sentence denotes The seventh novel human infecting Betacoronavirus that causes pneumonia (2019 novel coronavirus, 2019-nCoV) originated in Wuhan, China.
T4 255-386 Sentence denotes The evolutionary relationship between 2019-nCoV and the other human respiratory illness-causing coronavirus is not closely related.
T5 387-511 Sentence denotes We sought to characterize the relationship of the translated proteins of 2019-nCoV with other species of Orthocoronavirinae.
T6 512-574 Sentence denotes A phylogenetic tree was constructed from the genome sequences.
T7 575-700 Sentence denotes A cluster tree was developed from the profiles retrieved from the presence and absence of homologs of ten 2019-nCoV proteins.
T8 701-841 Sentence denotes The combined data were used to characterize the relationship of the translated proteins of 2019-nCoV to other species of Orthocoronavirinae.
T9 842-1047 Sentence denotes Our analysis reliably suggests that 2019-nCoV is most closely related to BatCoV RaTG13 and belongs to subgenus Sarbecovirus of Betacoronavirus, together with SARS coronavirus and Bat-SARS-like coronavirus.
T10 1048-1215 Sentence denotes The phylogenetic profiling cluster of homolog proteins of one annotated 2019-nCoV protein against other genome sequences revealed two clades of ten 2019-nCoV proteins.
T11 1216-1383 Sentence denotes Clade 1 consisted of a group of conserved proteins in Orthocoronavirinae comprising Orf1ab polyprotein, Nucleocapsid protein, Spike glycoprotein, and Membrane protein.
T12 1384-1457 Sentence denotes Clade 2 comprised six proteins exclusive to Sarbecovirus and Hibecovirus.
T13 1458-1594 Sentence denotes Two of six Clade 2 nonstructural proteins, NS7b and NS8, were exclusively conserved among 2019-nCoV, BetaCoV_RaTG, and BatSARS-like Cov.
T14 1595-1706 Sentence denotes NS7b and NS8 have previously been shown to affect immune response signaling in the SARS-CoV experimental model.
T15 1707-1901 Sentence denotes Thus, we speculated that knowledge of the functional changes in the NS7b and NS8 proteins during evolution may provide important information to explore the human infective property of 2019-nCoV.
T16 1903-1913 Sentence denotes Highlights
T17 1914-1968 Sentence denotes • 2019-nCoV is most closely related to BatCoV RaTG13.
T18 1969-2034 Sentence denotes • 2019-nCoV belongs to subgenus Sarbecovirus of Betacoronavirus.
T19 2035-2121 Sentence denotes • Phylogenetic profiling analysis and structural characterization of 2019-nCoV genes.
T20 2122-2195 Sentence denotes • Functional changes in NS7b and NS8 proteins help understand 2019-nCoV.
T21 2197-2212 Sentence denotes 1 Introduction
T22 2213-2395 Sentence denotes In December 2019, the seventh human coronavirus, termed 2019 novel coronavirus (2019-nCoV) or severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), was found in Wuhan, China.
T23 2396-2604 Sentence denotes On February 8, 2020, the total number of infections and deaths due to 2019-nCoV globally was 34,439 and 720, respectively, according to the Johns Hopkins University Center for Systems Science and Engineering.
T24 2605-2714 Sentence denotes Coronaviruses are enveloped RNA viruses that infect many species, including humans, other mammals, and birds.
T25 2715-2852 Sentence denotes After infection, the host may develop respiratory, bowel, liver, and neurological diseases (Weiss and Leibowitz, 2011; Cui et al., 2019).
T26 2853-2937 Sentence denotes Coronaviruses are members of the order Nidovirales and subfamily Orthocoronavirinae.
T27 2938-2981 Sentence denotes This subfamily is divided into four genera:
T28 2982-3056 Sentence denotes Alphacoronavirus, Betacoronavirus, Gammacoronavirus, and Deltacoronavirus.
T29 3057-3196 Sentence denotes Generally, Alphacoronavirus and Betacoronavirus tend to infect mammals, while Gammacoronavirus and Deltacoronavirus typically infect birds.
T30 3197-3313 Sentence denotes However, some Gammacoronavirus and Deltacoronavirus can infect mammals under specific conditions (Woo et al., 2012).
T31 3314-3584 Sentence denotes In immunocompromised individuals, infection with one of the four human coronaviruses—human coronavirus NL63 (HCoV-NL63), human coronavirus 229E (HCoV-229E), human coronavirus OC43 (HCoV-OC43), and human coronavirus HKU1 (ECoV-HKU1)—usually results in cold-like symptoms.
T32 3585-3659 Sentence denotes These viruses can cause severe infections in some infants and the elderly.
T33 3660-3787 Sentence denotes Due to the frequent interaction between wild animals and humans, wild animals are a common source of human zoonotic infections.
T34 3788-4068 Sentence denotes SARS-CoV and Middle East respiratory syndrome coronavirus (MERS-CoV) are zoonotic coronaviruses that can cause severe respiratory diseases in humans; both belong to Betacoronavirus (Su et al., 2016; Forni et al., 2017; Cui et al., 2019; Luk et al., 2019; Ramadan and Shaib, 2019).
T35 4069-4137 Sentence denotes 2019-nCoV is the seventh coronavirus discovered that infects humans.
T36 4138-4200 Sentence denotes It causes acute respiratory disease in respiratory infections.
T37 4201-4291 Sentence denotes Immediately after its discovery, the complete genome sequence of 2019-nCoV was determined.
T38 4292-4377 Sentence denotes The sequence (MN908947) was released by GenBank on 05 January 2020 (Lu et al., 2020).
T39 4378-4490 Sentence denotes The sequence of 2019-nCoV is 96% identical, at the whole-genome level, to a bat coronavirus (Zhou et al., 2020).
T40 4491-4586 Sentence denotes The genomic characteristics and epidemiology of 2019-nCoV have been analyzed (Lu et al., 2020).
T41 4587-4743 Sentence denotes Nine inpatient culture isolates were subjected to next-generation sequencing, and individual complete and partial 2019-nCoV genomic sequences were obtained.
T42 4744-4921 Sentence denotes Phylogenetic analysis of these 2019-nCoV genomes and other coronaviruses was performed to determine the evolutionary history of the virus and to explore the origin of 2019-nCoV.
T43 4922-5028 Sentence denotes At the first onset, homology modeling investigated the potential receptor-binding properties of the virus.
T44 5029-5136 Sentence denotes However, SARS-CoV and MERS-CoV showed approximate similarities of 79% and 50% with 2019-nCoV, respectively.
T45 5137-5254 Sentence denotes These findings indicated that there is not a close evolutionary relationship of 2019-nCoV with SARS-CoV and MERS-CoV.
T46 5255-5343 Sentence denotes Thus, 2019-nCoV is considered the seventh novel human Betacoronavirus (Lu et al., 2020).
T47 5344-5488 Sentence denotes In this study, we comprehensively characterized the relationship of the translated proteins of 2019-nCoV to other species of Orthocoronavirinae.
T48 5489-5713 Sentence denotes This was done using a combination of the phylogenetic tree constructed from the genome sequences and the cluster tree developed from the profiles retrieved from the presence and absence of homologs of ten 2019-nCoV proteins.
T49 5715-5725 Sentence denotes 2 Methods
T50 5726-5872 Sentence denotes The genomes and the combination of genome and protein sequences were used to develop a phylogenetic tree and phylogenetic profiling, respectively.
T51 5873-6035 Sentence denotes The dataset of the genomes of the Orthocoronavirinae subfamily was collected from the Refseq database using the Orthocoronavirinae NCBI taxonomy ID (txid2501931).
T52 6036-6189 Sentence denotes This dataset contains representative complete genomes from each species of that subfamily. (Pruitt et al., 2007; Federhen, 2012) (Supplementary Table 1).
T53 6190-6387 Sentence denotes Additionally, we collected genome sequences from Bat SARS-like coronavirus (MG772934 and MG772933) from NCBI and BetaCoV/bat/Yunnan/RaTG13/2013 (EPI_ISL_402131) from GISAID (http://www.GISAID.org).
T54 6388-6512 Sentence denotes One species of the Okanivirinae subfamily, the yellow head virus, was also collected as an outgroup (Supplementary Table 1).
T55 6513-6739 Sentence denotes The genome sequences were aligned using MAFFT multiple sequence alignment program provided at the XSEDE portal in the CIPRES Science Gateway with an automatic selection strategy (Miller et al., 2012; Katoh and Standley, 2013).
T56 6740-6885 Sentence denotes A phylogenetic tree was constructed using the maximum likelihood method with RAxML-HPC BlackBox in the CIPRES Science Gateway (Stamatakis, 2006).
T57 6886-7027 Sentence denotes The analysis used an automatic bootstrapping option using a general time-reversible substitution model with a gamma-shape parameter (GTR+ G).
T58 7028-7154 Sentence denotes The model was selected as the best-fit model under the Akaike information criterion using ModelTest-NG (Darriba et al., 2020).
T59 7155-7250 Sentence denotes Phylogenetic trees were viewed using FigTree v1.4 (http://tree.bio.ed.ac.uk/software/figtree/).
T60 7251-7375 Sentence denotes The annotated protein sequences of 2019-nCoV were collected from the data of one representative genome from NCBI (MN996527).
T61 7376-7494 Sentence denotes We built a BLAST database with the retrieved genome sequences data using BLAST+ version 2.2.30 (Camacho et al., 2009).
T62 7495-7799 Sentence denotes We then determined the presence and absence of homolog proteins of one representative set of annotated 2019-nCoV proteins against other genome sequences in a database using tblastn with a threshold of >50 and > 25 bits score for protein sequences >50 amino acids (aa) and < 50 aa in length, respectively.
T63 7800-8014 Sentence denotes The results of the presence and absence of homolog proteins were converted into a binary matrix and used to build a clustering tree using ward hierarchical clustering method (Ward Jr, 1963) (Supplementary Table 2).
T64 8015-8157 Sentence denotes Nonstructural protein (NS) 7b and NS8 local alignments were only positive in the Sarbecovirus subgenus sample, excluding the SARS coronavirus.
T65 8158-8394 Sentence denotes Additionally, we predicted the structural properties of the 2019-nCoV NS7b protein, including the secondary structure and order-disorder propensity, using Jpred4 and DICHOT, respectively (Fukuchi et al., 2014; Drozdetskiy et al., 2015).
T66 8395-8536 Sentence denotes We also predicted the structure using the contact assisted protein structure prediction (C-I TASSER) composite approach (Zhang et al., 2018).
T67 8537-8683 Sentence denotes Additionally, we specifically collected the sequences that produced significant alignments of NS7b using the MEGA X software (Kumar et al., 2018).
T68 8685-8710 Sentence denotes 3 Results and discussion
T69 8712-8734 Sentence denotes 3.1 Phylogenetic tree
T70 8735-9068 Sentence denotes The phylogenetic analysis using complete genome sequences showed that 2019-nCoV was the most closely related to BatCoV RaTG13 and belonged to the Sarbecovirus subgenus of Betacoronavirus, together with SARS coronavirus and Bat-SARS-like coronavirus (BAT-SL-CoVZXC21 and BAT-SL-CoVZC45) with the full support of reliability (Fig. 1 ).
T71 9069-9369 Sentence denotes Additionally, Hibecovirus with Bat Hp-betacoronavirus/Zhejiang2013, as the representative species, was the most closely related subgenus of Betacoronavirus to Sarbecovirus as compared to other subgenera, including Merbecovirus (under which MERS-CoV has been classified), Nobecovirus, and Embecovirus.
T72 9370-9474 Sentence denotes These findings agree with previous phylogenetic tree and similarity plot data (Paraskevis et al., 2020).
T73 9475-9660 Sentence denotes 2019-nCoV was found to be more closely related to the bat-infecting Sarbecovirus species, Bat SARS-like coronavirus, and BetaCoV RaTG13 than to the SARS coronavirus that infects humans.
T74 9661-9724 Sentence denotes This indicated that 2019-nCoV more likely originated from bats.
T75 9725-9841 Sentence denotes However, the Wuhan outbreak was first detected in December, which is a time of year when most bat species hibernate.
T76 9842-9950 Sentence denotes Moreover, the Huanan seafood market, which is considered as ground zero of the outbreak, does not sell bats.
T77 9951-10262 Sentence denotes Instead, it has been suggested that there is an animal mediator for virus transmission from bats to humans, similar to the previous cases of SARS-CoV and MERS-CoV, wherein the masked palm civet (Paguma larvata) and dromedary camel (Camelus dromedarius) act as intermediate hosts, respectively (Lu et al., 2020).
T78 10263-10547 Sentence denotes Although coronaviruses can exchange genetic material during coinfection, a recent report described the lack of a mosaic relationship of 2019-nCoV to the closely related Sarbecovirus, indicating the lack of a recombination event in the emergence of 2019-nCoV (Paraskevis et al., 2020).
T79 10548-10743 Sentence denotes Hence, 2019-nCoV likely emerged from the accumulation of mutations responding to altered selective pressures or from the infidelity of RNA polymerase perpetuated as replication-neutral mutations.
T80 10744-10790 Sentence denotes These speculations need to be studied further.
T81 10791-10954 Sentence denotes Fig. 1 Phylogenetic tree of representative species from the Orthocoronavirinae subfamily with Okavirus as an outgroup, constructed using maximum likelihood method.
T82 10955-11032 Sentence denotes The asterisk indicates the fully supported reliability of maximum likelihood.
T83 11034-11061 Sentence denotes 3.2 Phylogenetic profiling
T84 11062-11302 Sentence denotes A previously reported comprehensive similarity plot revealed notable mutational hotspots and conserved regions of the genome nucleotide positions of 2019-nCoV against closely related coronaviruses (Lu et al., 2020; Paraskevis et al., 2020).
T85 11303-11535 Sentence denotes The present findings provide a different perspective of the similarity among Orthocoronavirinae species, using a cluster tree developed from the profiles retrieved from the presence and absence of homologs of ten 2019-nCoV proteins.
T86 11536-11637 Sentence denotes This cluster was combined with the cladogram of a previously constructed phylogenetic tree (Fig. 2 ).
T87 11638-11700 Sentence denotes Both the trees were consistent in their heatmap distributions.
T88 11701-11753 Sentence denotes The tree of 2019-nCoV proteins comprised two clades.
T89 11754-11877 Sentence denotes The first, indicated with a blue bar in Fig. 2, contained a group of conserved proteins in most Orthocoronavirinae species.
T90 11878-11977 Sentence denotes These comprised Orf1ab polyprotein, Nucleocapsid protein, Spike glycoprotein, and Membrane protein.
T91 11978-12172 Sentence denotes Spike and Orf1a regions of 2019-nCoV were previously shown to have the lowest sequence identity as compared to the closely related coronavirus species (Lu et al., 2020; Paraskevis et al., 2020).
T92 12173-12352 Sentence denotes However, since the translated Spike glycoprotein and Orf1ab polyprotein from these regions are very long, the sequence similarity is still sufficient to classify them as homologs.
T93 12353-12536 Sentence denotes In contrast, another clade, indicated by the green bar in Fig. 2, comprised proteins specific to Sarbecovirus for all proteins in this clade and Hibecovirus for envelope protein only.
T94 12537-12625 Sentence denotes This clade included proteins that were not completely conserved by all Orthocoronavirus.
T95 12626-12818 Sentence denotes Two (NS7b and NS8) of five nonstructural proteins were specific for 2019-nCoV and its closely related species, BatCoV RaTG13 and Bat-SARS-like coronavirus (BAT-SL-CoVZXC21 and BAT-SL-CoVZC45).
T96 12819-12922 Sentence denotes The other three nonstructural proteins (NS3, NS6, and NS7a) were also detected in the SARS coronavirus.
T97 12923-13099 Sentence denotes Based on these results, we propose that the comprehensive analysis of nonstructural proteins, especially NS7b and NS8, may provide new insight into the properties of 2019-nCoV.
T98 13100-13279 Sentence denotes Fig. 2 Phylogenetic profiling of the annotated 2019-nCoV proteins combined with the maximum likelihood cladogram of the Orthocoronavirinae subfamily with Okavirus as the outgroup.
T99 13280-13461 Sentence denotes The heatmap indicates the binary matrix of the homolog proteins of 2019-nCoV against other species in the dataset, with black and white colors as presence and absence, respectively.
T100 13462-13535 Sentence denotes The bit pattern was arranged following the vertical and horizontal trees.
T101 13536-13668 Sentence denotes The vertical tree is a phylogenetic profiling tree constructed from a binary matrix of the presence and absence of homolog proteins.
T102 13669-13721 Sentence denotes It has two clades, indicated by blue and green bars.
T103 13722-13978 Sentence denotes The horizontal tree is the cladogram of the maximum likelihood tree, as shown in Fig. 1, with a collapsed clade of 2019-nCoV. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
T104 13979-14124 Sentence denotes As shown in Fig. 2, NS7b and NS8 of 2019-nCoV, BatCoV RaTG13, and Bat-SARS-like coronavirus were distinct from other species of Orthocoronavirus.
T105 14125-14201 Sentence denotes In SARS-CoV, NS7b is an integral protein localized in the Golgi compartment.
T106 14202-14275 Sentence denotes The protein is packaged into SARS-CoV particles (Schaecher et al., 2007).
T107 14276-14479 Sentence denotes Interestingly, open reading frame (ORF) 7b, but not ORF 7b deletion, induces interferon (IFN)-dependent reporter gene expression as well as apoptosis and the type I IFN response (Pfefferle et al., 2009).
T108 14480-14559 Sentence denotes Moreover, the deletion of ORF 7b enhance virus growth (Pfefferle et al., 2009).
T109 14560-14689 Sentence denotes Thus, we speculate that the property of the non-conserved NS7b in 2019-nCoV may affect the human infective property of the virus.
T110 14690-14805 Sentence denotes Similarly, the existence of 29 nucleotide deletions in ORF 8b has been described in SARS-CoV (Oostra et al., 2007).
T111 14806-14976 Sentence denotes A study involving MERS-CoV described that ORF 8b strongly antagonizes the INF-beta (β) promoter and ORF4b and 8b significantly suppress IFN induction (Lee et al., 2019b).
T112 14977-15214 Sentence denotes Accessory proteins 8b and 8ab of SARS-CoV can suppress the INF-β signaling pathway (and thus interferon production) by their participation in the ubiquitin-mediated rapid degradation of INF regulatory factor 3 (IRF3) (Wong et al., 2018).
T113 15215-15394 Sentence denotes In contrast, when we focused on MERS-CoV from bats and camels, ORF 8b antagonized melanoma differentiation-associated protein 5-mediated nuclear factor kappa B (NF-κB) activation.
T114 15395-15559 Sentence denotes ORF 8b strongly inhibited TANK-binding kinase 1-mediated induction of NF-κB signaling, but not IκB kinase epsilon and IRF3-mediated activations (Lee et al., 2019a).
T115 15560-15693 Sentence denotes Thus, we speculate that the properties of the accessory proteins, NS7b and NS8, in 2019-nCoV may affect its ability to infect humans.
T116 15694-15751 Sentence denotes Further studies are required to confirm this speculation.
T117 15752-15791 Sentence denotes NS7b is a short peptide of 43 residues.
T118 15792-15877 Sentence denotes A three-dimensional structure is often difficult to obtain from such a short peptide.
T119 15878-16156 Sentence denotes We predicted the three-dimensional structure of the queried NS7b amino acid sequence using DICHOT and C-I-TASSER (Supplementary Fig. 1, Fig. 3 ) (Fukuchi et al., 2014; Zhang et al., 2018); a protein family (PF11395) was found, but no known three-dimensional structure was found.
T120 16157-16277 Sentence denotes The secondary structure of this query was also predicted using Jpred4 (Supplementary Fig. 2) (Drozdetskiy et al., 2015).
T121 16278-16413 Sentence denotes The secondary structure was predicted to be an α-helix, but that this very likely does not occur depending on the environment (Fig. 3).
T122 16414-16612 Sentence denotes The alignment of this protein revealed three polymorphism sites between 2019-nCoV, BatCoV RaTG13, and Bat-SARS-like coronavirus sequences (BAT-SL-CoVZXC21 and BAT-SL-CoVZC45) (Supplementary Fig. 3).
T123 16613-16707 Sentence denotes Fig. 3 The model of nonstructural-structural transition of 2019-nCoV nonstructural protein 7b.
T124 16708-16832 Sentence denotes The predicted protein structure of 2019-nCoV nonstructural protein 7b by C-I TASSER is shown as the helix structure protein.
T125 16833-16949 Sentence denotes In summary, some nonstructural proteins were conserved and others were not conserved between 2019-nCoV and SARS-CoV.
T126 16950-17204 Sentence denotes By focusing on the 2019-nCoV-specific proteins, NS7b and NS8, we proposed a combination of phylogenetic profiling analysis and structural characterization of the genes that were specifically expressed in 2019-nCoV and the closely related bat coronavirus.
T127 17205-17301 Sentence denotes The data provide insight for further characterization of the infective properties of this virus.
T128 17302-17388 Sentence denotes The following are the supplementary data related to this article.Supplementary Table 1
T129 17389-17470 Sentence denotes Dataset used in this study including accession or ID, taxonomy, and name of data.
T130 17471-17492 Sentence denotes Supplementary Table 2
T131 17493-17525 Sentence denotes Binary matrix of profiling data.
T132 17526-17548 Sentence denotes Supplementary material
T133 17550-17557 Sentence denotes Funding
T134 17558-17778 Sentence denotes This work was supported by the 10.13039/501100001700MEXT-Supported Program for the Strategic Research Foundation at Private Universities (grant number S1511028 to T.I) and the 10.13039/100007449Takeda Science Foundation.
T135 17780-17813 Sentence denotes Declaration of Competing Interest
T136 17814-17856 Sentence denotes The authors declare no competing interest.
T137 17858-17873 Sentence denotes Acknowledgments
T138 17874-18012 Sentence denotes We want to thank Dr. Motonori Ota, Dr. Satoshi Fukuchi, Dr. Kota Kasahara, and Dr. Takeshi Kikuchi for their support and helpful comments.

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