PMC:7105881 / 60738-61526
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T334 | 38-46 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T335 | 111-119 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T336 | 267-274 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T337 | 336-343 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T338 | 455-463 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T285 | 14-22 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T286 | 123-131 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T287 | 133-139 | Disease | denotes | PDB: 5 | http://purl.obolibrary.org/obo/MONDO_0009394 |
| T288 | 162-168 | Disease | denotes | PDB: 5 | http://purl.obolibrary.org/obo/MONDO_0009394 |
| T289 | 486-494 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T290 | 527-535 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T681 | 145-146 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T682 | 279-286 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | labeled |
| T683 | 546-547 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T684 | 632-650 | http://purl.obolibrary.org/obo/GO_0043235 | denotes | receptor complexes |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T88377 | 38-46 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T67552 | 111-119 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T11071 | 267-274 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T81908 | 336-343 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T18364 | 455-463 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T2754 | 686-697 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T335 | 100-137 | Sentence | denotes | Trimeric S proteins of SARS-CoV (PDB: |
| T336 | 138-166 | Sentence | denotes | 5×5b) (A) and MERS-CoV (PDB: |
| T337 | 167-218 | Sentence | denotes | 5×5f) (C) are colored differently for each monomer. |
| T338 | 219-316 | Sentence | denotes | Two conformations of the RBD in each trimeric S protein are labeled as standing and lying states. |
| T339 | 317-387 | Sentence | denotes | The RBDs of each S protein are shown as light blue on the right panel. |
| T340 | 388-517 | Sentence | denotes | ACE2 and DPP4 receptors are respectively modeled to the trimeric S proteins by match-alignment of SARS-CoV RBD-ACE2 complex (PDB: |
| T341 | 518-583 | Sentence | denotes | 2AJF) to SARS-CoV S trimer (B) or MERS-CoV RBD-DPP4 complex (PDB: |
| T342 | 584-615 | Sentence | denotes | 4kr0) to MERS-CoV S trimer (D). |
| T343 | 616-679 | Sentence | denotes | Each of the RBD-receptor complexes is shown on the right panel. |
| T344 | 680-788 | Sentence | denotes | ACE2, angiotensin-converting enzyme 2; DPP4, dipeptidyl peptidase 4; RBD, receptor-binding domain; S, spike. |