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PMC:7105881 / 17598-18333 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
608 213-218 Gene denotes pp1ab Gene:14254602
609 236-243 Gene denotes ORF 1ab Gene:43740578
610 285-286 Gene denotes N Gene:43740575
611 552-556 Gene denotes ACE2 Gene:59272
612 275-276 Gene denotes E Gene:43740570
613 278-279 Gene denotes M Gene:43740571
614 272-273 Gene denotes S Gene:43740568
615 39-44 Species denotes human Tax:9606
616 93-102 Species denotes SARSr-CoV Tax:694009
617 151-159 Species denotes SARS-CoV Tax:694009
618 195-204 Species denotes 2019-nCoV Tax:2697049
619 364-372 Species denotes SARS-CoV Tax:694009
620 377-385 Species denotes MERS-CoV Tax:1335626
621 387-396 Species denotes 2019-nCoV Tax:2697049
622 439-448 Species denotes 2019-nCoV Tax:2697049
623 482-490 Species denotes SARS-CoV Tax:694009
624 495-503 Species denotes MERS-CoV Tax:1335626
625 522-530 Species denotes SARS-CoV Tax:694009
626 532-541 Species denotes 2019-nCoV Tax:2697049
627 651-660 Species denotes 2019-nCoV Tax:2697049
628 45-48 Species denotes CoV Tax:11118
629 50-59 Species denotes 2019-nCoV Tax:2697049

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T79 185-191 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T80 262-270 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T81 307-315 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T82 419-423 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T83 596-601 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T64 151-159 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T65 364-372 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T66 482-490 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T67 522-530 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T206 39-44 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T207 317-322 http://purl.obolibrary.org/obo/CLO_0053817 denotes 3a, 6
T208 351-353 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2A
T209 419-423 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T210 596-601 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T211 708-711 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T79 262-270 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T80 307-315 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

2_test

Id Subject Object Predicate Lexical cue
32265848-32015507-36511069 174-178 32015507 denotes 2020
32265848-32015507-36511070 616-620 32015507 denotes 2020

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T110 0-180 Sentence denotes Recent studies have found that the new human CoV, 2019-nCoV, which belongs to the species of SARSr-CoV, shares high sequence identify (about 79.5%) to SARS-CoV (Zhou et al., 2020).
T111 181-355 Sentence denotes The genome of 2019-nCoV encodes pp1ab (translated from ORF 1ab), four structural proteins (S, E, M, and N), and six accessory proteins (3a, 6, 7a, 7b, 8, and 10) (Figure 2A).
T112 356-424 Sentence denotes Same as SARS-CoV and MERS-CoV, 2019-nCoV appears to have no HE gene.
T113 425-516 Sentence denotes The virion of 2019-nCoV consists of similar structure as SARS-CoV and MERS-CoV (Figure 2B).
T114 517-622 Sentence denotes Like SARS-CoV, 2019-nCoV also uses ACE2 as its cellular receptor to enter host cells (Zhou et al., 2020).
T115 623-735 Sentence denotes Currently, the structure of 2019-nCoV RBD and/or its binding with the viral receptor has not yet been available.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T334 39-44 SP_6;NCBITaxon:9606 denotes human
T335 50-59 SP_7 denotes 2019-nCoV
T336 82-89 NCBITaxon:species denotes species
T337 151-159 SP_10 denotes SARS-CoV
T338 185-191 SO:0001026 denotes genome
T339 195-204 SP_7 denotes 2019-nCoV
T340 213-218 PG_15 denotes pp1ab
T341 220-230 GO:0006412 denotes translated
T342 236-239 SO:0000236 denotes ORF
T343 364-372 SP_10 denotes SARS-CoV
T344 377-385 SP_9 denotes MERS-CoV
T345 387-396 SP_7 denotes 2019-nCoV
T346 419-423 SO:0000704 denotes gene
T347 439-448 SP_7 denotes 2019-nCoV
T348 482-490 SP_10 denotes SARS-CoV
T349 495-503 SP_9 denotes MERS-CoV
T350 522-530 SP_10 denotes SARS-CoV
T351 532-541 SP_7 denotes 2019-nCoV
T352 552-556 G_3;PG_10;PR:000003622 denotes ACE2
T353 651-660 SP_7 denotes 2019-nCoV
T354 693-698 NCBITaxon:10239 denotes viral
T1965 39-44 SP_6;NCBITaxon:9606 denotes human
T85882 50-59 SP_7 denotes 2019-nCoV
T71678 82-89 NCBITaxon:species denotes species
T10379 151-159 SP_10 denotes SARS-CoV
T31660 185-191 SO:0001026 denotes genome
T21405 195-204 SP_7 denotes 2019-nCoV
T59197 213-218 PG_15 denotes pp1ab
T93875 220-230 GO:0006412 denotes translated
T21842 236-239 SO:0000236 denotes ORF
T77041 364-372 SP_10 denotes SARS-CoV
T8743 377-385 SP_9 denotes MERS-CoV
T42284 387-396 SP_7 denotes 2019-nCoV
T61203 419-423 SO:0000704 denotes gene
T64022 439-448 SP_7 denotes 2019-nCoV
T97146 482-490 SP_10 denotes SARS-CoV
T89407 495-503 SP_9 denotes MERS-CoV
T3948 522-530 SP_10 denotes SARS-CoV
T28360 532-541 SP_7 denotes 2019-nCoV
T33721 552-556 G_3;PG_10;PR:000003622 denotes ACE2
T49760 651-660 SP_7 denotes 2019-nCoV
T92299 693-698 NCBITaxon:10239 denotes viral