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PMC:7105881 / 15178-16154 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
507 129-160 Gene denotes angiotensin-converting enzyme 2 Gene:59272
508 162-166 Gene denotes ACE2 Gene:59272
509 315-319 Gene denotes ACE2 Gene:59272
510 475-479 Gene denotes ACE2 Gene:59272
511 540-544 Gene denotes ACE2 Gene:70008
512 780-784 Gene denotes ACE2 Gene:59272
513 922-926 Gene denotes ACE2 Gene:59272
514 11-20 Species denotes HCoV-NL63 Tax:277944
515 55-63 Species denotes SARS-CoV Tax:694009
516 469-474 Species denotes human Tax:9606
517 481-489 Species denotes SARS-CoV Tax:694009
518 534-539 Species denotes mouse Tax:10090
519 657-665 Species denotes SARS-CoV Tax:694009
520 720-724 Species denotes CoVs Tax:11118
521 757-761 Species denotes CoVs Tax:11118
522 774-779 Species denotes human Tax:9606
523 881-889 Species denotes SARS-CoV Tax:694009

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T72 198-202 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T73 306-313 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T74 492-499 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T75 519-523 Body_part denotes palm http://purl.org/sig/ont/fma/fma24920
T76 822-827 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T55 55-63 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T56 481-489 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T57 657-665 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T58 881-889 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T171 44-46 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T172 44-46 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T173 117-119 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T174 198-202 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T175 204-206 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T176 204-206 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T177 270-273 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T178 469-474 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T179 534-539 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T180 547-549 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T181 547-549 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T182 564-566 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T183 564-566 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T184 599-601 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T185 667-669 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T186 667-669 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T187 685-687 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T188 685-687 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T189 710-713 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T190 774-779 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T191 822-827 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T192 974-975 http://purl.obolibrary.org/obo/CLO_0001021 denotes B

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T64 44-46 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T65 129-140 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T66 204-206 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T67 306-313 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T68 492-499 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T69 547-549 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T70 564-566 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T71 667-669 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T72 685-687 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T73 829-831 Chemical denotes Ge http://purl.obolibrary.org/obo/CHEBI_30441

2_test

Id Subject Object Predicate Lexical cue
32265848-15897467-36511049 38-42 15897467 denotes 2005
32265848-25428871-36511050 48-52 25428871 denotes 2015
32265848-14647384-36511051 215-219 14647384 denotes 2003
32265848-28393837-36511052 447-451 28393837 denotes 2017
32265848-15452268-36511053 558-562 15452268 denotes 2004
32265848-18448527-36511054 568-572 18448527 denotes 2008
32265848-18448527-36511056 689-693 18448527 denotes 2008
32265848-27578435-36511057 695-699 27578435 denotes 2016
32265848-24172901-36511058 840-844 24172901 denotes 2013
32265848-29190287-36511059 857-861 29190287 denotes 2017

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T92 0-221 Sentence denotes Similar to HCoV-NL63 (Hofmann et al., 2005; Li, 2015), SARS-CoV recognizes, through the RBD in the CTD region of its S1 subunit, angiotensin-converting enzyme 2 (ACE2) as the receptor on the target cell (Li et al., 2003).
T93 222-314 Sentence denotes The RBD (CTD) in two states (standing or lying) has been observed in the trimeric S protein.
T94 315-453 Sentence denotes ACE2 binds to standing RBD, specifically in the receptor-binding motif (RBM), keeping the RBD in the “standing” state (Yuan et al., 2017).
T95 454-574 Sentence denotes In addition to human ACE2, SARS-CoV S protein could also bind to palm civet and mouse ACE2s (Li et al., 2004; Li, 2008).
T96 575-701 Sentence denotes Mutations in the RBD of S1 subunit are required for cross-species transmission of SARS-CoV (Li et al., 2005c; Li, 2008, 2016).
T97 702-863 Sentence denotes Several bat SARSr-CoVs have been identified, and these CoVs can utilize human ACE2 as their receptor to bind the target cells (Ge et al., 2013; Hu et al., 2017).
T98 864-976 Sentence denotes The structure of SARS-CoV S trimer and RBD binding to the ACE2 receptor is shown in Supplementary Figures S1A,B.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T283 55-63 SP_10 denotes SARS-CoV
T284 129-160 PG_10;PR:000003622 denotes angiotensin-converting enzyme 2
T285 162-166 G_3;PG_10;PR:000003622 denotes ACE2
T286 304-313 PG_1 denotes S protein
T287 315-319 G_3;PG_10;PR:000003622 denotes ACE2
T288 469-474 SP_6;NCBITaxon:9606;PG_10 denotes human
T289 475-479 PG_10;PR:000003622 denotes ACE2
T290 481-489 SP_10 denotes SARS-CoV
T291 490-499 PG_1 denotes S protein
T292 519-529 SP_5 denotes palm civet
T293 534-539 NCBITaxon:10088 denotes mouse
T294 540-545 G_3;PG_10;PR:000003622 denotes ACE2s
T295 633-640 NCBITaxon:species denotes species
T296 657-665 SP_10 denotes SARS-CoV
T297 710-713 SP_2 denotes bat
T298 774-779 SP_6;NCBITaxon:9606;PG_10 denotes human
T299 780-784 PG_10;PR:000003622 denotes ACE2
T300 881-889 SP_10 denotes SARS-CoV
T301 922-926 G_3;PG_10;PR:000003622 denotes ACE2
T75904 55-63 SP_10 denotes SARS-CoV
T49457 129-160 PG_10;PR:000003622 denotes angiotensin-converting enzyme 2
T35911 162-166 G_3;PG_10;PR:000003622 denotes ACE2
T70634 304-313 PG_1 denotes S protein
T11366 315-319 G_3;PG_10;PR:000003622 denotes ACE2
T55512 469-474 SP_6;NCBITaxon:9606;PG_10 denotes human
T44473 475-479 PG_10;PR:000003622 denotes ACE2
T82875 481-489 SP_10 denotes SARS-CoV
T71569 490-499 PG_1 denotes S protein
T13510 519-529 SP_5 denotes palm civet
T75313 534-539 NCBITaxon:10088 denotes mouse
T61463 540-545 G_3;PG_10;PR:000003622 denotes ACE2s
T80982 633-640 NCBITaxon:species denotes species
T18234 657-665 SP_10 denotes SARS-CoV
T61271 710-713 SP_2 denotes bat
T69856 774-779 SP_6;NCBITaxon:9606;PG_10 denotes human
T52038 780-784 PG_10;PR:000003622 denotes ACE2
T61108 881-889 SP_10 denotes SARS-CoV
T50014 922-926 G_3;PG_10;PR:000003622 denotes ACE2