PMC:7105343 / 79610-80446
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7105343","sourcedb":"PMC","sourceid":"7105343","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7105343","text":"JAK-signal transducer and activator of transcription (STAT), the suppressor of cytokine signaling protein 1 (SOCS1), and SOCS3.\nIFN-I are major antiviral molecules, and coronaviruses have evolved diverse strategies to counter the IFN-I response during infection.\nThis study uses endoplasmic reticulum stress and IFN-I production after infection with transmissible gastroenteritis virus (TGEV) to understand how coronavirus-elicited ER stress is actively involved in viral replication and manipulates the host IFN-I response.\nIncreased SOCS1 or SOCS3 expression impaired the IFN-I antiviral response, promoting TGEV replication.\nIRE1α is an endoplasmic reticulum stress sensor, which led to the increased expression of negative regulators of JAK-STAT SOCS1 and SOCS3.\nTherefore, IRE1α may be a novel target against coronavirus infection.","divisions":[{"label":"p","span":{"begin":0,"end":127}},{"label":"p","span":{"begin":128,"end":262}},{"label":"p","span":{"begin":263,"end":524}},{"label":"p","span":{"begin":525,"end":627}},{"label":"p","span":{"begin":628,"end":766}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T638","span":{"begin":79,"end":87},"obj":"Body_part"},{"id":"T639","span":{"begin":98,"end":105},"obj":"Body_part"},{"id":"T640","span":{"begin":279,"end":300},"obj":"Body_part"},{"id":"T641","span":{"begin":640,"end":661},"obj":"Body_part"}],"attributes":[{"id":"A638","pred":"fma_id","subj":"T638","obj":"http://purl.org/sig/ont/fma/fma84050"},{"id":"A639","pred":"fma_id","subj":"T639","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A640","pred":"fma_id","subj":"T640","obj":"http://purl.org/sig/ont/fma/fma63842"},{"id":"A641","pred":"fma_id","subj":"T641","obj":"http://purl.org/sig/ont/fma/fma63842"},{"subj":"T638","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T639","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T640","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T641","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T622","span":{"begin":252,"end":261},"obj":"Disease"},{"id":"T623","span":{"begin":335,"end":344},"obj":"Disease"},{"id":"T624","span":{"begin":364,"end":379},"obj":"Disease"},{"id":"T625","span":{"begin":826,"end":835},"obj":"Disease"}],"attributes":[{"id":"A622","pred":"mondo_id","subj":"T622","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A623","pred":"mondo_id","subj":"T623","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A624","pred":"mondo_id","subj":"T624","obj":"http://purl.obolibrary.org/obo/MONDO_0002269"},{"id":"A625","pred":"mondo_id","subj":"T625","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T622","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T623","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T624","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T625","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T686","span":{"begin":4,"end":10},"obj":"http://purl.obolibrary.org/obo/SO_0000418"},{"id":"T687","span":{"begin":26,"end":35},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T688","span":{"begin":88,"end":97},"obj":"http://purl.obolibrary.org/obo/SO_0000418"},{"id":"T689","span":{"begin":380,"end":385},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T690","span":{"begin":445,"end":453},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T691","span":{"begin":791,"end":792},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T686","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T687","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T688","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T689","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T690","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T691","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T29159","span":{"begin":98,"end":105},"obj":"Chemical"},{"id":"T68787","span":{"begin":128,"end":131},"obj":"Chemical"},{"id":"T11728","span":{"begin":144,"end":153},"obj":"Chemical"},{"id":"T93605","span":{"begin":154,"end":163},"obj":"Chemical"},{"id":"T4845","span":{"begin":230,"end":233},"obj":"Chemical"},{"id":"T495","span":{"begin":312,"end":315},"obj":"Chemical"},{"id":"T78370","span":{"begin":509,"end":512},"obj":"Chemical"},{"id":"T98307","span":{"begin":574,"end":577},"obj":"Chemical"},{"id":"T76873","span":{"begin":580,"end":589},"obj":"Chemical"}],"attributes":[{"id":"A61040","pred":"chebi_id","subj":"T29159","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A79108","pred":"chebi_id","subj":"T68787","obj":"http://purl.obolibrary.org/obo/CHEBI_52999"},{"id":"A97659","pred":"chebi_id","subj":"T11728","obj":"http://purl.obolibrary.org/obo/CHEBI_22587"},{"id":"A71662","pred":"chebi_id","subj":"T93605","obj":"http://purl.obolibrary.org/obo/CHEBI_25367"},{"id":"A48586","pred":"chebi_id","subj":"T4845","obj":"http://purl.obolibrary.org/obo/CHEBI_52999"},{"id":"A18590","pred":"chebi_id","subj":"T495","obj":"http://purl.obolibrary.org/obo/CHEBI_52999"},{"id":"A51257","pred":"chebi_id","subj":"T78370","obj":"http://purl.obolibrary.org/obo/CHEBI_52999"},{"id":"A56824","pred":"chebi_id","subj":"T98307","obj":"http://purl.obolibrary.org/obo/CHEBI_52999"},{"id":"A82986","pred":"chebi_id","subj":"T76873","obj":"http://purl.obolibrary.org/obo/CHEBI_22587"},{"subj":"T29159","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T68787","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T11728","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T93605","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T4845","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T495","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T78370","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T98307","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T76873","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T164","span":{"begin":39,"end":52},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T165","span":{"begin":88,"end":97},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T166","span":{"begin":466,"end":483},"obj":"http://purl.obolibrary.org/obo/GO_0019079"},{"id":"T167","span":{"begin":466,"end":483},"obj":"http://purl.obolibrary.org/obo/GO_0019058"},{"id":"T168","span":{"begin":580,"end":598},"obj":"http://purl.obolibrary.org/obo/GO_0051607"}],"attributes":[{"subj":"T164","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T165","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T166","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T167","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T168","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T538","span":{"begin":128,"end":262},"obj":"Sentence"},{"id":"T539","span":{"begin":263,"end":524},"obj":"Sentence"},{"id":"T540","span":{"begin":525,"end":627},"obj":"Sentence"},{"id":"T541","span":{"begin":628,"end":766},"obj":"Sentence"},{"id":"T542","span":{"begin":767,"end":836},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T538","pred":"source","obj":"LitCovid-sentences"},{"subj":"T539","pred":"source","obj":"LitCovid-sentences"},{"subj":"T540","pred":"source","obj":"LitCovid-sentences"},{"subj":"T541","pred":"source","obj":"LitCovid-sentences"},{"subj":"T542","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"2696","span":{"begin":109,"end":114},"obj":"Gene"},{"id":"2697","span":{"begin":121,"end":126},"obj":"Gene"},{"id":"2698","span":{"begin":535,"end":540},"obj":"Gene"},{"id":"2699","span":{"begin":544,"end":549},"obj":"Gene"},{"id":"2700","span":{"begin":628,"end":633},"obj":"Gene"},{"id":"2701","span":{"begin":750,"end":755},"obj":"Gene"},{"id":"2702","span":{"begin":760,"end":765},"obj":"Gene"},{"id":"2703","span":{"begin":778,"end":783},"obj":"Gene"},{"id":"2717","span":{"begin":169,"end":182},"obj":"Species"},{"id":"2718","span":{"begin":350,"end":385},"obj":"Species"},{"id":"2719","span":{"begin":387,"end":391},"obj":"Species"},{"id":"2720","span":{"begin":411,"end":422},"obj":"Species"},{"id":"2721","span":{"begin":610,"end":614},"obj":"Species"},{"id":"2740","span":{"begin":252,"end":261},"obj":"Disease"},{"id":"2741","span":{"begin":335,"end":344},"obj":"Disease"},{"id":"2742","span":{"begin":814,"end":835},"obj":"Disease"}],"attributes":[{"id":"A2696","pred":"tao:has_database_id","subj":"2696","obj":"Gene:8651"},{"id":"A2697","pred":"tao:has_database_id","subj":"2697","obj":"Gene:9021"},{"id":"A2698","pred":"tao:has_database_id","subj":"2698","obj":"Gene:8651"},{"id":"A2699","pred":"tao:has_database_id","subj":"2699","obj":"Gene:9021"},{"id":"A2700","pred":"tao:has_database_id","subj":"2700","obj":"Gene:2081"},{"id":"A2701","pred":"tao:has_database_id","subj":"2701","obj":"Gene:8651"},{"id":"A2702","pred":"tao:has_database_id","subj":"2702","obj":"Gene:9021"},{"id":"A2703","pred":"tao:has_database_id","subj":"2703","obj":"Gene:2081"},{"id":"A2717","pred":"tao:has_database_id","subj":"2717","obj":"Tax:11118"},{"id":"A2718","pred":"tao:has_database_id","subj":"2718","obj":"Tax:11149"},{"id":"A2719","pred":"tao:has_database_id","subj":"2719","obj":"Tax:11149"},{"id":"A2720","pred":"tao:has_database_id","subj":"2720","obj":"Tax:11118"},{"id":"A2721","pred":"tao:has_database_id","subj":"2721","obj":"Tax:11149"},{"id":"A2740","pred":"tao:has_database_id","subj":"2740","obj":"MESH:D007239"},{"id":"A2741","pred":"tao:has_database_id","subj":"2741","obj":"MESH:D007239"},{"id":"A2742","pred":"tao:has_database_id","subj":"2742","obj":"MESH:D018352"},{"subj":"2696","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2697","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2698","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2699","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2700","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2701","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2702","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2703","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2717","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2718","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2719","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2720","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2721","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2740","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2741","pred":"source","obj":"LitCovid-PubTator"},{"subj":"2742","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#93ec98","default":true},{"id":"LitCovid-PD-MONDO","color":"#ec93a7"},{"id":"LitCovid-PD-CLO","color":"#93c1ec"},{"id":"LitCovid-PD-CHEBI","color":"#dbec93"},{"id":"LitCovid-PD-GO-BP","color":"#e393ec"},{"id":"LitCovid-sentences","color":"#93ecc9"},{"id":"LitCovid-PubTator","color":"#ecaf93"}]}]}}