PMC:7104244 / 3850-5145
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
58 | 11-21 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
59 | 618-628 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
60 | 1118-1128 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
61 | 1274-1284 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
62 | 207-215 | Disease | denotes | COVID-19 | MESH:C000657245 |
63 | 236-241 | Disease | denotes | fever | MESH:D005334 |
64 | 243-250 | Disease | denotes | fatigue | MESH:D005221 |
65 | 252-261 | Disease | denotes | dry cough | MESH:D003371 |
66 | 263-270 | Disease | denotes | myalgia | MESH:D063806 |
67 | 272-280 | Disease | denotes | dyspnoea | MESH:D004417 |
68 | 286-294 | Disease | denotes | headache | MESH:D006261 |
69 | 394-402 | Disease | denotes | COVID-19 | MESH:C000657245 |
70 | 462-471 | Disease | denotes | infection | MESH:D007239 |
71 | 1261-1269 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T49 | 11-21 | SP_7 | denotes | SARS-CoV-2 |
T48 | 207-215 | SP_7 | denotes | COVID-19 |
T47 | 256-261 | UBERON:0002048 | denotes | cough |
T46 | 394-402 | SP_7 | denotes | COVID-19 |
T45 | 425-436 | NCBITaxon:1 | denotes | individuals |
T44 | 618-628 | SP_7 | denotes | SARS-CoV-2 |
T43 | 813-819 | UBERON:0001988 | denotes | stools |
T42 | 945-950 | UBERON:0001988 | denotes | stool |
T41 | 1037-1043 | UBERON:0001988 | denotes | faeces |
T40 | 1118-1128 | SP_7 | denotes | SARS-CoV-2 |
T39 | 1261-1269 | SP_7 | denotes | COVID-19 |
T38 | 1274-1284 | SP_7 | denotes | SARS-CoV-2 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T24 | 813-819 | Body_part | denotes | stools | http://purl.org/sig/ont/fma/fma64183 |
T25 | 945-950 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
T26 | 1037-1043 | Body_part | denotes | faeces | http://purl.org/sig/ont/fma/fma64183 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T16 | 813-819 | Body_part | denotes | stools | http://purl.obolibrary.org/obo/UBERON_0001988 |
T17 | 945-950 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
T18 | 1037-1043 | Body_part | denotes | faeces | http://purl.obolibrary.org/obo/UBERON_0001988 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T16 | 11-19 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T17 | 207-215 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T18 | 394-402 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T19 | 462-471 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T20 | 618-626 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T21 | 1118-1126 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T22 | 1261-1269 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T23 | 1274-1282 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T34 | 589-595 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
T35 | 750-751 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T36 | 908-911 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T37 | 1188-1201 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | organisations |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T6 | 72-77 | Chemical | denotes | donor | http://purl.obolibrary.org/obo/CHEBI_17891 |
T7 | 554-559 | Chemical | denotes | donor | http://purl.obolibrary.org/obo/CHEBI_17891 |
T8 | 807-812 | Chemical | denotes | donor | http://purl.obolibrary.org/obo/CHEBI_17891 |
T9 | 902-907 | Chemical | denotes | donor | http://purl.obolibrary.org/obo/CHEBI_17891 |
T10 | 1011-1016 | Chemical | denotes | donor | http://purl.obolibrary.org/obo/CHEBI_17891 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 236-241 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
T2 | 243-250 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
T3 | 252-261 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
T4 | 263-270 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
T5 | 272-280 | Phenotype | denotes | dyspnoea | http://purl.obolibrary.org/obo/HP_0002094 |
T6 | 286-294 | Phenotype | denotes | headache | http://purl.obolibrary.org/obo/HP_0002315 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11 | 0-97 | Sentence | denotes | To prevent SARS-CoV-2 transmission, we propose additions to the current donor screening measures. |
T12 | 98-501 | Sentence | denotes | In all countries, before each donation, physicians should screen for two main items: the presence of typical COVID-19 symptoms (including fever, fatigue, dry cough, myalgia, dyspnoea, and headache) within the previous 30 days; and the donor's history of travel to regions known to be affected by COVID-19 or close contact with individuals with proven or suspected infection, within the previous 30 days. |
T13 | 502-629 | Sentence | denotes | If either of these items is positive, the potential donor should either be rejected or tested with RT-PCR assay for SARS-CoV-2. |
T14 | 630-791 | Sentence | denotes | In endemic countries, the RT-PCR assay should be considered in all donors, even if they are asymptomatic or do not have a history of high-risk travel or contact. |
T15 | 792-935 | Sentence | denotes | Alternatively, donor stools should be stored and quarantined for 30 days before use, and released only if the donor has not developed symptoms. |
T16 | 936-1129 | Sentence | denotes | Finally, stool banks should retrospectively check the health status of the donor before using frozen faeces, according to local epidemiology, to avoid further potential spreading of SARS-CoV-2. |
T17 | 1130-1295 | Sentence | denotes | These suggestions should be tailored to local health-care organisations, and should be updated accordingly as further insight into COVID-19 and SARS-CoV-2 is gained. |