PMC:7104244 / 2712-3601
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 36 | 28-38 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 37 | 330-338 | Species | denotes | patients | Tax:9606 |
| 38 | 752-757 | Species | denotes | human | Tax:9606 |
| 41 | 296-321 | Disease | denotes | gastrointestinal symptoms | MESH:D012817 |
| 42 | 351-359 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 43 | 879-888 | Disease | denotes | infection | MESH:D007239 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T64 | 28-38 | SP_7 | denotes | SARS-CoV-2 |
| T63 | 55-61 | UBERON:0001988 | denotes | faeces |
| T62 | 72-77 | UBERON:0001988 | denotes | stool |
| T61 | 114-119 | NCBITaxon:10239 | denotes | virus |
| T60 | 164-181 | UBERON:0000065 | denotes | respiratory tract |
| T59 | 222-226 | UBERON:0000165 | denotes | oral |
| T58 | 296-312 | UBERON:0001555 | denotes | gastrointestinal |
| T57 | 351-359 | SP_7 | denotes | COVID-19 |
| T56 | 491-499 | GO:0065007 | denotes | regulate |
| T55 | 523-527 | CHEBI:23888;CHEBI:23888 | denotes | drug |
| T54 | 573-579 | UBERON:0000479 | denotes | tissue |
| T53 | 628-638 | GO:0065007 | denotes | regulation |
| T52 | 752-757 | SP_6;NCBITaxon:9606 | denotes | human |
| T51 | 765-772 | UBERON:0000479 | denotes | tissues |
| T50 | 789-795 | UBERON:0000479 | denotes | tissue |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T17 | 55-61 | Body_part | denotes | faeces | http://purl.org/sig/ont/fma/fma64183 |
| T18 | 72-77 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T19 | 164-181 | Body_part | denotes | respiratory tract | http://purl.org/sig/ont/fma/fma265130 |
| T20 | 573-579 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T21 | 758-763 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T22 | 765-772 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
| T23 | 789-795 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T11 | 55-61 | Body_part | denotes | faeces | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T12 | 72-77 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T13 | 164-181 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
| T14 | 573-579 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T15 | 789-795 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T14 | 28-36 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T15 | 879-888 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T25 | 9-12 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T26 | 114-119 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T27 | 213-214 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T28 | 521-522 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T29 | 571-572 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T30 | 685-686 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T31 | 752-763 | http://purl.obolibrary.org/obo/CLO_0053065 | denotes | human cells |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T5 | 523-527 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 628-638 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T9 | 0-889 | Sentence | denotes | Evidence has shown that the SARS-CoV-2 can be found in faeces, and that stool samples can remain positive for the virus even when it is no longer detectable in the respiratory tract, suggesting the possibility of a faecal–oral route of transmission.9 This concept is supported by the presence of gastrointestinal symptoms in some patients affected by COVID-19.10 Another relevant issue is that faecal microbiota transplantation is not classified in the same way worldwide, as some countries regulate these transplants as a drug (eg, the USA, the UK, and France), some as a tissue (eg, Italy), and others do not provide specific regulation (eg, Australia).8 This discrepancy results in a confusing scenario, in which some countries will apply rules for human cells, tissues, or cellular or tissue-based products, and others will not, potentially contributing to the spread of the infection. |