PMC:7104244 / 2335-3849 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7104244","sourcedb":"PMC","sourceid":"7104244","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7104244","text":"Given the global COVID-19 outbreak, we, as an international group of experts in faecal microbiota transplantation and stool banking, believe that recommendations to update (at least temporarily) the screening of stool donors are urgently needed, as the risk of transmitting SARS-CoV-2 by faecal microbiota transplantation might be higher than that in other tissue transplants. Evidence has shown that the SARS-CoV-2 can be found in faeces, and that stool samples can remain positive for the virus even when it is no longer detectable in the respiratory tract, suggesting the possibility of a faecal–oral route of transmission.9 This concept is supported by the presence of gastrointestinal symptoms in some patients affected by COVID-19.10 Another relevant issue is that faecal microbiota transplantation is not classified in the same way worldwide, as some countries regulate these transplants as a drug (eg, the USA, the UK, and France), some as a tissue (eg, Italy), and others do not provide specific regulation (eg, Australia).8 This discrepancy results in a confusing scenario, in which some countries will apply rules for human cells, tissues, or cellular or tissue-based products, and others will not, potentially contributing to the spread of the infection. A more alarming issue is represented by the uncontrolled practice of homemade faecal microbiota transplantation, which is widespread among patients who want to try this treatment for indications outside of clinical guidelines or clinical trials.11","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"35","span":{"begin":274,"end":284},"obj":"Species"},{"id":"36","span":{"begin":405,"end":415},"obj":"Species"},{"id":"37","span":{"begin":707,"end":715},"obj":"Species"},{"id":"38","span":{"begin":1129,"end":1134},"obj":"Species"},{"id":"39","span":{"begin":1406,"end":1414},"obj":"Species"},{"id":"40","span":{"begin":17,"end":25},"obj":"Disease"},{"id":"41","span":{"begin":673,"end":698},"obj":"Disease"},{"id":"42","span":{"begin":728,"end":736},"obj":"Disease"},{"id":"43","span":{"begin":1256,"end":1265},"obj":"Disease"}],"attributes":[{"id":"A35","pred":"tao:has_database_id","subj":"35","obj":"Tax:2697049"},{"id":"A36","pred":"tao:has_database_id","subj":"36","obj":"Tax:2697049"},{"id":"A37","pred":"tao:has_database_id","subj":"37","obj":"Tax:9606"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"Tax:9606"},{"id":"A39","pred":"tao:has_database_id","subj":"39","obj":"Tax:9606"},{"id":"A40","pred":"tao:has_database_id","subj":"40","obj":"MESH:C000657245"},{"id":"A41","pred":"tao:has_database_id","subj":"41","obj":"MESH:D012817"},{"id":"A42","pred":"tao:has_database_id","subj":"42","obj":"MESH:C000657245"},{"id":"A43","pred":"tao:has_database_id","subj":"43","obj":"MESH:D007239"},{"subj":"35","pred":"source","obj":"LitCovid-PubTator"},{"subj":"36","pred":"source","obj":"LitCovid-PubTator"},{"subj":"37","pred":"source","obj":"LitCovid-PubTator"},{"subj":"38","pred":"source","obj":"LitCovid-PubTator"},{"subj":"39","pred":"source","obj":"LitCovid-PubTator"},{"subj":"40","pred":"source","obj":"LitCovid-PubTator"},{"subj":"41","pred":"source","obj":"LitCovid-PubTator"},{"subj":"42","pred":"source","obj":"LitCovid-PubTator"},{"subj":"43","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T69","span":{"begin":17,"end":25},"obj":"SP_7"},{"id":"T68","span":{"begin":118,"end":123},"obj":"UBERON:0001988"},{"id":"T67","span":{"begin":212,"end":217},"obj":"UBERON:0001988"},{"id":"T66","span":{"begin":274,"end":284},"obj":"SP_7"},{"id":"T65","span":{"begin":357,"end":363},"obj":"UBERON:0000479"},{"id":"T64","span":{"begin":405,"end":415},"obj":"SP_7"},{"id":"T63","span":{"begin":432,"end":438},"obj":"UBERON:0001988"},{"id":"T62","span":{"begin":449,"end":454},"obj":"UBERON:0001988"},{"id":"T61","span":{"begin":491,"end":496},"obj":"NCBITaxon:10239"},{"id":"T60","span":{"begin":541,"end":558},"obj":"UBERON:0000065"},{"id":"T59","span":{"begin":599,"end":603},"obj":"UBERON:0000165"},{"id":"T58","span":{"begin":673,"end":689},"obj":"UBERON:0001555"},{"id":"T57","span":{"begin":728,"end":736},"obj":"SP_7"},{"id":"T56","span":{"begin":868,"end":876},"obj":"GO:0065007"},{"id":"T55","span":{"begin":900,"end":904},"obj":"CHEBI:23888;CHEBI:23888"},{"id":"T54","span":{"begin":950,"end":956},"obj":"UBERON:0000479"},{"id":"T53","span":{"begin":1005,"end":1015},"obj":"GO:0065007"},{"id":"T52","span":{"begin":1129,"end":1134},"obj":"SP_6;NCBITaxon:9606"},{"id":"T51","span":{"begin":1142,"end":1149},"obj":"UBERON:0000479"},{"id":"T50","span":{"begin":1166,"end":1172},"obj":"UBERON:0000479"}],"attributes":[{"subj":"T69","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T68","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T67","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T66","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T65","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T64","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T63","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T62","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T61","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T60","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T59","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T58","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T57","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T56","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T55","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T54","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T53","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T52","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T51","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T50","pred":"source","obj":"LitCovid-PMC-OGER-BB"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T14","span":{"begin":118,"end":123},"obj":"Body_part"},{"id":"T15","span":{"begin":212,"end":217},"obj":"Body_part"},{"id":"T16","span":{"begin":357,"end":363},"obj":"Body_part"},{"id":"T17","span":{"begin":432,"end":438},"obj":"Body_part"},{"id":"T18","span":{"begin":449,"end":454},"obj":"Body_part"},{"id":"T19","span":{"begin":541,"end":558},"obj":"Body_part"},{"id":"T20","span":{"begin":950,"end":956},"obj":"Body_part"},{"id":"T21","span":{"begin":1135,"end":1140},"obj":"Body_part"},{"id":"T22","span":{"begin":1142,"end":1149},"obj":"Body_part"},{"id":"T23","span":{"begin":1166,"end":1172},"obj":"Body_part"}],"attributes":[{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma64183"},{"id":"A15","pred":"fma_id","subj":"T15","obj":"http://purl.org/sig/ont/fma/fma64183"},{"id":"A16","pred":"fma_id","subj":"T16","obj":"http://purl.org/sig/ont/fma/fma9637"},{"id":"A17","pred":"fma_id","subj":"T17","obj":"http://purl.org/sig/ont/fma/fma64183"},{"id":"A18","pred":"fma_id","subj":"T18","obj":"http://purl.org/sig/ont/fma/fma64183"},{"id":"A19","pred":"fma_id","subj":"T19","obj":"http://purl.org/sig/ont/fma/fma265130"},{"id":"A20","pred":"fma_id","subj":"T20","obj":"http://purl.org/sig/ont/fma/fma9637"},{"id":"A21","pred":"fma_id","subj":"T21","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma9637"},{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma9637"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T19","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T20","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T21","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T22","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T23","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T8","span":{"begin":118,"end":123},"obj":"Body_part"},{"id":"T9","span":{"begin":212,"end":217},"obj":"Body_part"},{"id":"T10","span":{"begin":357,"end":363},"obj":"Body_part"},{"id":"T11","span":{"begin":432,"end":438},"obj":"Body_part"},{"id":"T12","span":{"begin":449,"end":454},"obj":"Body_part"},{"id":"T13","span":{"begin":541,"end":558},"obj":"Body_part"},{"id":"T14","span":{"begin":950,"end":956},"obj":"Body_part"},{"id":"T15","span":{"begin":1166,"end":1172},"obj":"Body_part"}],"attributes":[{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0001988"},{"id":"A9","pred":"uberon_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/UBERON_0001988"},{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"id":"A11","pred":"uberon_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/UBERON_0001988"},{"id":"A12","pred":"uberon_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/UBERON_0001988"},{"id":"A13","pred":"uberon_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/UBERON_0000065"},{"id":"A14","pred":"uberon_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"id":"A15","pred":"uberon_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T12","span":{"begin":17,"end":25},"obj":"Disease"},{"id":"T13","span":{"begin":274,"end":282},"obj":"Disease"},{"id":"T14","span":{"begin":405,"end":413},"obj":"Disease"},{"id":"T15","span":{"begin":1256,"end":1265},"obj":"Disease"}],"attributes":[{"id":"A12","pred":"mondo_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A13","pred":"mondo_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A14","pred":"mondo_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A15","pred":"mondo_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T25","span":{"begin":386,"end":389},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T26","span":{"begin":491,"end":496},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T27","span":{"begin":590,"end":591},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T28","span":{"begin":898,"end":899},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T29","span":{"begin":948,"end":949},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T30","span":{"begin":1062,"end":1063},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T31","span":{"begin":1129,"end":1140},"obj":"http://purl.obolibrary.org/obo/CLO_0053065"},{"id":"T32","span":{"begin":1267,"end":1268},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T33","span":{"begin":1512,"end":1514},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"}],"attributes":[{"subj":"T25","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T26","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T27","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T29","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T30","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T31","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T32","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T33","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T4","span":{"begin":60,"end":65},"obj":"Chemical"},{"id":"T5","span":{"begin":900,"end":904},"obj":"Chemical"}],"attributes":[{"id":"A4","pred":"chebi_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_23888"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":1005,"end":1015},"obj":"http://purl.obolibrary.org/obo/GO_0065007"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T8","span":{"begin":0,"end":376},"obj":"Sentence"},{"id":"T9","span":{"begin":377,"end":1266},"obj":"Sentence"},{"id":"T10","span":{"begin":1267,"end":1514},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T8","pred":"source","obj":"LitCovid-sentences"},{"subj":"T9","pred":"source","obj":"LitCovid-sentences"},{"subj":"T10","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#93e9ec","default":true},{"id":"LitCovid-PMC-OGER-BB","color":"#ecd593"},{"id":"LitCovid-PD-FMA-UBERON","color":"#bb93ec"},{"id":"LitCovid-PD-UBERON","color":"#93eca1"},{"id":"LitCovid-PD-MONDO","color":"#ec939f"},{"id":"LitCovid-PD-CLO","color":"#93b9ec"},{"id":"LitCovid-PD-CHEBI","color":"#d3ec93"},{"id":"LitCovid-PD-GO-BP","color":"#eb93ec"},{"id":"LitCovid-sentences","color":"#93ecd1"}]}]}}