PMC:7103735 / 8664-9673
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T30 | 47-51 | Body_part | denotes | back | http://purl.org/sig/ont/fma/fma25056 |
| T31 | 303-316 | Body_part | denotes | bronchiolitis | http://purl.org/sig/ont/fma/fma76497 |
| T32 | 449-465 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
| T33 | 460-465 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T34 | 849-872 | Body_part | denotes | lower respiratory tract | http://purl.org/sig/ont/fma/fma45662 |
| T35 | 961-984 | Body_part | denotes | lower respiratory tract | http://purl.org/sig/ont/fma/fma45662 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T18 | 849-872 | Body_part | denotes | lower respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001558 |
| T19 | 855-872 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
| T20 | 961-984 | Body_part | denotes | lower respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001558 |
| T21 | 967-984 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T102 | 12-16 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T103 | 231-239 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T104 | 231-235 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T105 | 303-316 | Disease | denotes | bronchiolitis | http://purl.obolibrary.org/obo/MONDO_0002465 |
| T106 | 336-345 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T107 | 579-599 | Disease | denotes | respiratory diseases | http://purl.obolibrary.org/obo/MONDO_0005087 |
| T108 | 620-629 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T109 | 664-669 | Disease | denotes | croup | http://purl.obolibrary.org/obo/MONDO_0005722 |
| T110 | 849-880 | Disease | denotes | lower respiratory tract disease | http://purl.obolibrary.org/obo/MONDO_0000270 |
| T111 | 967-994 | Disease | denotes | respiratory tract infection | http://purl.obolibrary.org/obo/MONDO_0024355 |
| T112 | 985-994 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T107 | 187-192 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T108 | 280-281 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T109 | 303-316 | http://purl.obolibrary.org/obo/UBERON_0002186 | denotes | bronchiolitis |
| T110 | 321-322 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T111 | 436-441 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T112 | 442-448 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | airway |
| T113 | 449-459 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T114 | 460-465 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T115 | 650-655 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T116 | 703-710 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T117 | 765-771 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
| T118 | 849-872 | http://purl.obolibrary.org/obo/UBERON_0001558 | denotes | lower respiratory tract |
| T119 | 895-896 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T120 | 961-984 | http://purl.obolibrary.org/obo/UBERON_0001558 | denotes | lower respiratory tract |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T72 | 0-125 | Sentence | denotes | In the post-SARS era, CoV research was brought back to the limelight and more effort was put into the search for novel HCoVs. |
| T73 | 126-240 | Sentence | denotes | The search was fruitful and two new HCoVs were identified in human samples positive for HCoV but not for SARS-CoV. |
| T74 | 241-368 | Sentence | denotes | NL63 and HKU1 were first isolated from a child suffering from bronchiolitis and a patient with pneumonia, respectively [14,15]. |
| T75 | 369-503 | Sentence | denotes | HKU1 is difficult to culture and can only be propagated in primary human airway epithelial cells cultured at the air–liquid interface. |
| T76 | 504-600 | Sentence | denotes | Similar to 229E and OC43, NL63 and HKU1 were found worldwide, causing mild respiratory diseases. |
| T77 | 601-687 | Sentence | denotes | Particularly, NL63 infection was associated with virus-induced croup in children [16]. |
| T78 | 688-772 | Sentence | denotes | All these four viruses are community-acquired HCoVs that are well adapted to humans. |
| T79 | 773-881 | Sentence | denotes | Only in rare cases, they might be accidentally mutated to cause more severe lower respiratory tract disease. |
| T80 | 882-1009 | Sentence | denotes | For example, a subtype of NL63 was recently found to be associated with severe lower respiratory tract infection in China [17]. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T15 | 303-316 | Phenotype | denotes | bronchiolitis | http://purl.obolibrary.org/obo/HP_0011950 |
| T16 | 336-345 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T17 | 664-669 | Phenotype | denotes | croup | http://purl.obolibrary.org/obo/HP_0033000 |
| T18 | 961-994 | Phenotype | denotes | lower respiratory tract infection | http://purl.obolibrary.org/obo/HP_0002783 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32172672-15034574-27782208 | 361-363 | 15034574 | denotes | 14 |
| 32172672-16757599-27782209 | 364-366 | 16757599 | denotes | 15 |
| 32172672-16104827-27782210 | 683-685 | 16104827 | denotes | 16 |
| 32172672-31996093-27782211 | 1005-1007 | 31996093 | denotes | 17 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 246 | 22-25 | Species | denotes | CoV | Tax:11118 |
| 247 | 187-192 | Species | denotes | human | Tax:9606 |
| 248 | 231-239 | Species | denotes | SARS-CoV | Tax:694009 |
| 249 | 282-287 | Species | denotes | child | Tax:9606 |
| 250 | 323-330 | Species | denotes | patient | Tax:9606 |
| 251 | 436-441 | Species | denotes | human | Tax:9606 |
| 252 | 673-681 | Species | denotes | children | Tax:9606 |
| 253 | 765-771 | Species | denotes | humans | Tax:9606 |
| 254 | 241-245 | Species | denotes | NL63 | Tax:277944 |
| 255 | 530-534 | Species | denotes | NL63 | Tax:277944 |
| 256 | 615-619 | Species | denotes | NL63 | Tax:277944 |
| 257 | 908-912 | Species | denotes | NL63 | Tax:277944 |
| 258 | 303-316 | Disease | denotes | bronchiolitis | MESH:D001988 |
| 259 | 336-345 | Disease | denotes | pneumonia | MESH:D011014 |
| 260 | 579-599 | Disease | denotes | respiratory diseases | MESH:D012140 |
| 261 | 620-629 | Disease | denotes | infection | MESH:D007239 |
| 262 | 855-880 | Disease | denotes | respiratory tract disease | MESH:D012140 |
| 263 | 967-994 | Disease | denotes | respiratory tract infection | MESH:D012141 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32172672-15034574-27782208 | 361-363 | 15034574 | denotes | 14 |
| 32172672-16757599-27782209 | 364-366 | 16757599 | denotes | 15 |
| 32172672-16104827-27782210 | 683-685 | 16104827 | denotes | 16 |
| 32172672-31996093-27782211 | 1005-1007 | 31996093 | denotes | 17 |