PMC:7103735 / 13410-14811
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T54 | 141-151 | Body_part | denotes | nucleotide | http://purl.org/sig/ont/fma/fma82740 |
| T55 | 331-335 | Body_part | denotes | palm | http://purl.org/sig/ont/fma/fma24920 |
| T56 | 362-366 | Body_part | denotes | Palm | http://purl.org/sig/ont/fma/fma24920 |
| T57 | 444-452 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
| T58 | 909-913 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T59 | 1082-1089 | Body_part | denotes | genomes | http://purl.org/sig/ont/fma/fma84116 |
| T60 | 1100-1110 | Body_part | denotes | nucleotide | http://purl.org/sig/ont/fma/fma82740 |
| T61 | 1142-1146 | Body_part | denotes | palm | http://purl.org/sig/ont/fma/fma24920 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T140 | 53-61 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T141 | 53-57 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T142 | 63-71 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T143 | 63-67 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T144 | 86-90 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T145 | 163-171 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T146 | 163-167 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T147 | 418-426 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T148 | 418-422 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T149 | 435-443 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T150 | 435-439 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T151 | 507-516 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T152 | 553-561 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T153 | 553-557 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T154 | 566-570 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T155 | 640-648 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T156 | 640-644 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T157 | 769-777 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T158 | 769-773 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T159 | 782-786 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T160 | 855-859 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T161 | 885-889 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T162 | 949-957 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T163 | 949-953 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T164 | 996-1000 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T165 | 1038-1046 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T166 | 1038-1042 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T167 | 1335-1343 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T168 | 1335-1339 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T160 | 36-42 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T161 | 219-220 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T162 | 226-232 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T163 | 246-252 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T164 | 278-285 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animals |
| T165 | 347-348 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T166 | 349-356 | http://purl.obolibrary.org/obo/NCBITaxon_9654 | denotes | raccoon |
| T167 | 586-593 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animals |
| T168 | 751-752 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T169 | 813-817 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bats |
| T170 | 837-838 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T171 | 881-884 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bat |
| T172 | 909-913 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T173 | 994-995 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T174 | 1065-1069 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bats |
| T175 | 1238-1243 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T176 | 1247-1253 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
| T177 | 1368-1374 | http://purl.obolibrary.org/obo/NCBITaxon_9837 | denotes | camels |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T26 | 141-151 | Chemical | denotes | nucleotide | http://purl.obolibrary.org/obo/CHEBI_36976 |
| T27 | 1100-1110 | Chemical | denotes | nucleotide | http://purl.obolibrary.org/obo/CHEBI_36976 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T113 | 0-361 | Sentence | denotes | In an effort to identify the direct animal source of SARS-CoV, SARS-CoV-related CoVs (SARS-rCoV), which share 99.8% sequence homology at the nucleotide level with SARS-CoV, were isolated in 2003 from workers working in a live animal market where animal meats were sold and from animals in the same market [28], including Himalayan palm civets and a raccoon dog. |
| T114 | 362-490 | Sentence | denotes | Palm civets were once thought to be the natural host of SARS-CoV as anti-SARS-CoV antibody was detected in civets in the market. |
| T115 | 491-576 | Sentence | denotes | In experimental infection, civets were equally susceptible to SARS-CoV and SARS-rCoV. |
| T116 | 577-622 | Sentence | denotes | Infected animals displayed clinical symptoms. |
| T117 | 623-793 | Sentence | denotes | However, no anti-SARS-CoV antibodies were detected in any wild or farmed civets [29], raising the possibility that they are not a natural host of SARS-CoV and SARS-rCoVs. |
| T118 | 794-874 | Sentence | denotes | In 2005, horseshoe bats were identified as a natural host of SARS-rCoVs [30,31]. |
| T119 | 875-958 | Sentence | denotes | These bat SARS-rCoVs serve as the gene pool and an evolutionary origin of SARS-CoV. |
| T120 | 959-1075 | Sentence | denotes | It is particularly noteworthy that a SARS-rCoV using the same ACE2 receptor as SARS-CoV was also found in bats [32]. |
| T121 | 1076-1129 | Sentence | denotes | Their genomes share 95% nucleotide sequence homology. |
| T122 | 1130-1254 | Sentence | denotes | Presumably, palm civets and other mammals in the market were transiently infected, and they transmitted the virus to humans. |
| T123 | 1255-1401 | Sentence | denotes | It remains to be clarified whether another stable and natural reservoir host of SARS-CoV, exactly like dromedary camels for MERS-CoV, might exist. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32172672-12958366-27782222 | 306-308 | 12958366 | denotes | 28 |
| 32172672-15663874-27782223 | 704-706 | 15663874 | denotes | 29 |
| 32172672-16169905-27782224 | 867-869 | 16169905 | denotes | 30 |
| 32172672-16195424-27782225 | 870-872 | 16195424 | denotes | 31 |
| 32172672-24172901-27782226 | 1071-1073 | 24172901 | denotes | 32 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 381 | 1021-1025 | Gene | denotes | ACE2 | Gene:59272 |
| 382 | 881-884 | Gene | denotes | bat | Gene:570 |
| 383 | 53-61 | Species | denotes | SARS-CoV | Tax:694009 |
| 384 | 63-71 | Species | denotes | SARS-CoV | Tax:694009 |
| 385 | 80-84 | Species | denotes | CoVs | Tax:11118 |
| 386 | 163-171 | Species | denotes | SARS-CoV | Tax:694009 |
| 387 | 349-360 | Species | denotes | raccoon dog | Tax:34880 |
| 388 | 553-561 | Species | denotes | SARS-CoV | Tax:694009 |
| 389 | 769-777 | Species | denotes | SARS-CoV | Tax:694009 |
| 390 | 803-817 | Species | denotes | horseshoe bats | Tax:49442 |
| 391 | 949-957 | Species | denotes | SARS-CoV | Tax:694009 |
| 392 | 1038-1046 | Species | denotes | SARS-CoV | Tax:694009 |
| 393 | 1247-1253 | Species | denotes | humans | Tax:9606 |
| 394 | 1335-1343 | Species | denotes | SARS-CoV | Tax:694009 |
| 395 | 1358-1367 | Species | denotes | dromedary | Tax:9838 |
| 396 | 1368-1374 | Species | denotes | camels | Tax:9838 |
| 397 | 1379-1387 | Species | denotes | MERS-CoV | Tax:1335626 |
| 398 | 418-426 | Species | denotes | SARS-CoV | Tax:694009 |
| 399 | 435-443 | Species | denotes | SARS-CoV | Tax:694009 |
| 400 | 640-648 | Species | denotes | SARS-CoV | Tax:694009 |
| 401 | 507-516 | Disease | denotes | infection | MESH:D007239 |
| 402 | 577-585 | Disease | denotes | Infected | MESH:D007239 |
| 403 | 1203-1211 | Disease | denotes | infected | MESH:D007239 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32172672-12958366-27782222 | 306-308 | 12958366 | denotes | 28 |
| 32172672-15663874-27782223 | 704-706 | 15663874 | denotes | 29 |
| 32172672-16169905-27782224 | 867-869 | 16169905 | denotes | 30 |
| 32172672-16195424-27782225 | 870-872 | 16195424 | denotes | 31 |
| 32172672-24172901-27782226 | 1071-1073 | 24172901 | denotes | 32 |