PMC:7103724 / 7080-13624
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T19 | 1187-1192 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T20 | 1254-1260 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T21 | 1702-1718 | Body_part | denotes | white blood cell | http://purl.org/sig/ont/fma/fma62852 |
| T22 | 1714-1718 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T23 | 1864-1869 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
| T24 | 1874-1880 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
| T25 | 2325-2330 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T26 | 2353-2358 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
| T27 | 2484-2489 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T28 | 2652-2656 | Body_part | denotes | Lung | http://purl.org/sig/ont/fma/fma7195 |
| T29 | 2956-2959 | Body_part | denotes | IgM | http://purl.org/sig/ont/fma/fma62873 |
| T30 | 2966-2969 | Body_part | denotes | IgA | http://purl.org/sig/ont/fma/fma62874 |
| T31 | 2976-2979 | Body_part | denotes | IgG | http://purl.org/sig/ont/fma/fma62872 |
| T32 | 3953-3969 | Body_part | denotes | white blood cell | http://purl.org/sig/ont/fma/fma62852 |
| T33 | 3965-3969 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T34 | 3974-3984 | Body_part | denotes | Neutrophil | http://purl.org/sig/ont/fma/fma62860 |
| T35 | 3989-3999 | Body_part | denotes | Lymphocyte | http://purl.org/sig/ont/fma/fma62863 |
| T36 | 4017-4027 | Body_part | denotes | Hemoglobin | http://purl.org/sig/ont/fma/fma62293 |
| T37 | 4034-4045 | Body_part | denotes | erythrocyte | http://purl.org/sig/ont/fma/fma62845 |
| T38 | 4086-4093 | Body_part | denotes | alanine | http://purl.org/sig/ont/fma/fma82749 |
| T39 | 4172-4175 | Body_part | denotes | IgM | http://purl.org/sig/ont/fma/fma62873 |
| T40 | 4177-4193 | Body_part | denotes | Immunoglobulin M | http://purl.org/sig/ont/fma/fma62873 |
| T41 | 4177-4191 | Body_part | denotes | Immunoglobulin | http://purl.org/sig/ont/fma/fma62871 |
| T42 | 4195-4198 | Body_part | denotes | IgG | http://purl.org/sig/ont/fma/fma62872 |
| T43 | 4200-4216 | Body_part | denotes | Immunoglobulin G | http://purl.org/sig/ont/fma/fma62872 |
| T44 | 4200-4214 | Body_part | denotes | Immunoglobulin | http://purl.org/sig/ont/fma/fma62871 |
| T45 | 4222-4238 | Body_part | denotes | Immunoglobulin A | http://purl.org/sig/ont/fma/fma62874 |
| T46 | 4222-4236 | Body_part | denotes | Immunoglobulin | http://purl.org/sig/ont/fma/fma62871 |
| T47 | 4290-4295 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
| T48 | 4332-4337 | Body_part | denotes | Serum | http://purl.org/sig/ont/fma/fma63083 |
| T49 | 4425-4441 | Body_part | denotes | white blood cell | http://purl.org/sig/ont/fma/fma62852 |
| T50 | 4437-4441 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T51 | 4536-4541 | Body_part | denotes | Serum | http://purl.org/sig/ont/fma/fma63083 |
| T52 | 4616-4620 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T53 | 4846-4851 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T54 | 5046-5051 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T55 | 5071-5075 | Body_part | denotes | Lung | http://purl.org/sig/ont/fma/fma7195 |
| T56 | 5405-5409 | Body_part | denotes | Lung | http://purl.org/sig/ont/fma/fma7195 |
| T57 | 5510-5515 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
| T58 | 5584-5589 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T59 | 6432-6437 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T14 | 1187-1192 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T15 | 1254-1260 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T16 | 1708-1713 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T17 | 1864-1869 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T18 | 1874-1880 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T19 | 2325-2330 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T20 | 2353-2358 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T21 | 2484-2489 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T22 | 2652-2656 | Body_part | denotes | Lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T23 | 3959-3964 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T24 | 4290-4295 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
| T25 | 4332-4337 | Body_part | denotes | Serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T26 | 4431-4436 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T27 | 4536-4541 | Body_part | denotes | Serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T28 | 4616-4620 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T29 | 4846-4851 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T30 | 5046-5051 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T31 | 5071-5075 | Body_part | denotes | Lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T32 | 5405-5409 | Body_part | denotes | Lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T33 | 5510-5515 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T34 | 5584-5589 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T35 | 6432-6437 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T28 | 102-112 | Disease | denotes | Infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T29 | 400-408 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T30 | 1249-1260 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T31 | 1582-1591 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T32 | 1770-1785 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T33 | 1776-1785 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T34 | 1825-1827 | Disease | denotes | CK | http://purl.obolibrary.org/obo/MONDO_0017941 |
| T35 | 1902-1914 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
| T36 | 1942-1945 | Disease | denotes | PCT | http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104 |
| T38 | 2022-2032 | Disease | denotes | bronchitis | http://purl.obolibrary.org/obo/MONDO_0003781 |
| T39 | 2056-2075 | Disease | denotes | bronchial pneumonia | http://purl.obolibrary.org/obo/MONDO_0005682 |
| T40 | 2066-2075 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T41 | 2877-2880 | Disease | denotes | PCT | http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104 |
| T43 | 2921-2923 | Disease | denotes | CK | http://purl.obolibrary.org/obo/MONDO_0017941 |
| T44 | 4061-4064 | Disease | denotes | PCT | http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104 |
| T46 | 4145-4147 | Disease | denotes | CK | http://purl.obolibrary.org/obo/MONDO_0017941 |
| T47 | 4338-4345 | Disease | denotes | amyloid | http://purl.obolibrary.org/obo/MONDO_0019065 |
| T48 | 4469-4480 | Disease | denotes | lymphopenia | http://purl.obolibrary.org/obo/MONDO_0003783 |
| T49 | 4531-4534 | Disease | denotes | PCT | http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104 |
| T51 | 4542-4549 | Disease | denotes | amyloid | http://purl.obolibrary.org/obo/MONDO_0019065 |
| T52 | 4712-4714 | Disease | denotes | CK | http://purl.obolibrary.org/obo/MONDO_0017941 |
| T53 | 5714-5722 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T54 | 5934-5943 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T55 | 6062-6071 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T56 | 6092-6095 | Disease | denotes | PCT | http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104 |
| T58 | 6464-6472 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T49 | 224-225 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T50 | 534-539 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | males |
| T51 | 534-539 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | males |
| T52 | 546-553 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | females |
| T53 | 559-560 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T54 | 912-915 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T55 | 949-950 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T56 | 1173-1177 | http://purl.obolibrary.org/obo/CLO_0001406 | denotes | 5/14 |
| T57 | 1187-1192 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T58 | 1262-1266 | http://purl.obolibrary.org/obo/CLO_0053001 | denotes | 1/14 |
| T59 | 1605-1610 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T60 | 1708-1713 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T61 | 1714-1718 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T62 | 1828-1830 | http://purl.obolibrary.org/obo/PR_000010213 | denotes | MB |
| T63 | 1864-1869 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| T64 | 1864-1869 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
| T65 | 1874-1880 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T66 | 1874-1880 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
| T67 | 1874-1880 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
| T68 | 2201-2202 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T69 | 2273-2274 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T70 | 2325-2330 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T71 | 2353-2358 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T72 | 2372-2373 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T73 | 2405-2407 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T74 | 2470-2471 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T75 | 2484-2489 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T76 | 2581-2582 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T77 | 2652-2656 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | Lung |
| T78 | 2652-2656 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | Lung |
| T79 | 2846-2848 | http://purl.obolibrary.org/obo/CLO_0003622 | denotes | Hb |
| T80 | 2894-2896 | http://purl.obolibrary.org/obo/CLO_0008426 | denotes | pg |
| T81 | 2924-2926 | http://purl.obolibrary.org/obo/PR_000010213 | denotes | MB |
| T82 | 2933-2936 | http://purl.obolibrary.org/obo/PR_000001004 | denotes | CD4 |
| T83 | 2941-2944 | http://purl.obolibrary.org/obo/CLO_0053438 | denotes | CD8 |
| T84 | 2995-2997 | http://purl.obolibrary.org/obo/CLO_0037284 | denotes | C4 |
| T85 | 3021-3030 | http://purl.obolibrary.org/obo/PR_000010213 | denotes | Myoglobin |
| T86 | 3043-3045 | http://purl.obolibrary.org/obo/CLO_0008426 | denotes | pg |
| T87 | 3098-3100 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
| T88 | 3101-3103 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 34 |
| T89 | 3248-3250 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T90 | 3273-3276 | http://purl.obolibrary.org/obo/CLO_0001230 | denotes | 293 |
| T91 | 3273-3276 | http://purl.obolibrary.org/obo/CLO_0037237 | denotes | 293 |
| T92 | 3273-3276 | http://purl.obolibrary.org/obo/CLO_0050903 | denotes | 293 |
| T93 | 3273-3276 | http://purl.obolibrary.org/obo/CLO_0054249 | denotes | 293 |
| T94 | 3273-3276 | http://purl.obolibrary.org/obo/CLO_0054250 | denotes | 293 |
| T95 | 3273-3276 | http://purl.obolibrary.org/obo/CLO_0054251 | denotes | 293 |
| T96 | 3273-3276 | http://purl.obolibrary.org/obo/CLO_0054252 | denotes | 293 |
| T97 | 3350-3354 | http://purl.obolibrary.org/obo/CLO_0001230 | denotes | 29 3 |
| T98 | 3350-3354 | http://purl.obolibrary.org/obo/CLO_0037237 | denotes | 29 3 |
| T99 | 3350-3354 | http://purl.obolibrary.org/obo/CLO_0050903 | denotes | 29 3 |
| T100 | 3350-3354 | http://purl.obolibrary.org/obo/CLO_0054249 | denotes | 29 3 |
| T101 | 3350-3354 | http://purl.obolibrary.org/obo/CLO_0054250 | denotes | 29 3 |
| T102 | 3350-3354 | http://purl.obolibrary.org/obo/CLO_0054251 | denotes | 29 3 |
| T103 | 3350-3354 | http://purl.obolibrary.org/obo/CLO_0054252 | denotes | 29 3 |
| T104 | 3447-3450 | http://purl.obolibrary.org/obo/CLO_0001046 | denotes | 116 |
| T105 | 3500-3502 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T106 | 3598-3600 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 36 |
| T107 | 3698-3700 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T108 | 3770-3773 | http://purl.obolibrary.org/obo/CLO_0001046 | denotes | 116 |
| T109 | 3790-3792 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T110 | 3796-3798 | http://purl.obolibrary.org/obo/CLO_0001407 | denotes | 52 |
| T111 | 3886-3888 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T112 | 3934-3936 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
| T113 | 3959-3964 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T114 | 3965-3969 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T115 | 4013-4015 | http://purl.obolibrary.org/obo/CLO_0003622 | denotes | Hb |
| T116 | 4034-4045 | http://purl.obolibrary.org/obo/CL_0000232 | denotes | erythrocyte |
| T117 | 4148-4150 | http://purl.obolibrary.org/obo/PR_000010213 | denotes | MB |
| T118 | 4168-4170 | http://purl.obolibrary.org/obo/PR_000010213 | denotes | MB |
| T119 | 4237-4238 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T120 | 4257-4259 | http://purl.obolibrary.org/obo/CLO_0037284 | denotes | C4 |
| T121 | 4290-4295 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T122 | 4290-4295 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
| T123 | 4308-4315 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptide |
| T124 | 4346-4347 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T125 | 4431-4436 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T126 | 4437-4441 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T127 | 4550-4551 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T128 | 4616-4620 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T129 | 4616-4620 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T130 | 4715-4717 | http://purl.obolibrary.org/obo/PR_000010213 | denotes | MB |
| T131 | 4810-4812 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T132 | 4846-4851 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T133 | 5046-5051 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T134 | 5071-5075 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | Lung |
| T135 | 5071-5075 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | Lung |
| T136 | 5142-5143 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T137 | 5243-5244 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T138 | 5276-5277 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T139 | 5405-5409 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | Lung |
| T140 | 5405-5409 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | Lung |
| T141 | 5436-5437 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T142 | 5450-5456 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | female |
| T143 | 5510-5515 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T144 | 5584-5589 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T145 | 5747-5758 | http://purl.obolibrary.org/obo/CLO_0009985 | denotes | was focused |
| T146 | 5910-5913 | http://purl.obolibrary.org/obo/CLO_0050884 | denotes | Ten |
| T147 | 6285-6290 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T21 | 813-825 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T22 | 821-825 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T23 | 1837-1840 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
| T24 | 1955-1957 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T26 | 2888-2890 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T28 | 2911-2914 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
| T29 | 3004-3012 | Chemical | denotes | Ferritin | http://purl.obolibrary.org/obo/CHEBI_82594 |
| T30 | 3021-3030 | Chemical | denotes | Myoglobin | http://purl.obolibrary.org/obo/CHEBI_7044 |
| T31 | 3038-3041 | Chemical | denotes | BNP | http://purl.obolibrary.org/obo/CHEBI_80234 |
| T32 | 4017-4027 | Chemical | denotes | Hemoglobin | http://purl.obolibrary.org/obo/CHEBI_5656 |
| T33 | 4086-4093 | Chemical | denotes | alanine | http://purl.obolibrary.org/obo/CHEBI_16449 |
| T34 | 4112-4115 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
| T35 | 4117-4126 | Chemical | denotes | aspartate | http://purl.obolibrary.org/obo/CHEBI_132943|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_72314 |
| T38 | 4152-4160 | Chemical | denotes | creatine | http://purl.obolibrary.org/obo/CHEBI_16919|http://purl.obolibrary.org/obo/CHEBI_57947 |
| T40 | 4274-4277 | Chemical | denotes | BNP | http://purl.obolibrary.org/obo/CHEBI_80234 |
| T41 | 4290-4315 | Chemical | denotes | brain natriuretic peptide | http://purl.obolibrary.org/obo/CHEBI_80234 |
| T42 | 4308-4315 | Chemical | denotes | peptide | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T43 | 4571-4573 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T45 | 4719-4727 | Chemical | denotes | Ferritin | http://purl.obolibrary.org/obo/CHEBI_82594 |
| T46 | 5682-5687 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
| T47 | 5824-5834 | Chemical | denotes | interferon | http://purl.obolibrary.org/obo/CHEBI_52999 |
| T48 | 5871-5880 | Chemical | denotes | ribavirin | http://purl.obolibrary.org/obo/CHEBI_63580 |
| T49 | 6004-6014 | Chemical | denotes | interferon | http://purl.obolibrary.org/obo/CHEBI_52999 |
| T50 | 6027-6035 | Chemical | denotes | medicine | http://purl.obolibrary.org/obo/CHEBI_23888 |
| T51 | 6107-6109 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T53 | 6128-6139 | Chemical | denotes | antibiotics | http://purl.obolibrary.org/obo/CHEBI_33281 |
| T54 | 6272-6284 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T55 | 6280-6284 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 1770-1785 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
| T3 | 1825-1830 | http://purl.obolibrary.org/obo/GO_0004111 | denotes | CK-MB |
| T4 | 1902-1914 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
| T5 | 2921-2926 | http://purl.obolibrary.org/obo/GO_0004111 | denotes | CK-MB |
| T6 | 4145-4150 | http://purl.obolibrary.org/obo/GO_0004111 | denotes | CK-MB |
| T7 | 4712-4717 | http://purl.obolibrary.org/obo/GO_0004111 | denotes | CK-MB |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T57 | 0-7 | Sentence | denotes | Results |
| T58 | 9-28 | Sentence | denotes | General information |
| T59 | 29-185 | Sentence | denotes | There were three boys, six girls and their 14 families admitted to Jinan Infectious Disease Hospital of Shandong University were investigated in this study. |
| T60 | 186-359 | Sentence | denotes | The youngest of the nine children was a pair of eleven-month-old twins and the oldest is nine years and 9 months old (mean age was 4.5 years, median age 3.5 years, Table 1). |
| T61 | 360-502 | Sentence | denotes | There were 16 families were infected by SARS-CoV-2, and 14 adults were enrolled in this study (two patients hospitalized in another hospital). |
| T62 | 503-628 | Sentence | denotes | The 14 patients consisted of 8 males and 6 females with a mean age of 42.9 years (median age, 37 years [range, 30–72 years]). |
| T63 | 630-653 | Sentence | denotes | Clinical manifestations |
| T64 | 654-707 | Sentence | denotes | All nine pediatric patients came from eight families. |
| T65 | 708-883 | Sentence | denotes | As shown in Table 1, six children had no information on symptoms available, but have positive results in nucleic acid detection after the positive diagnosis of their families. |
| T66 | 884-976 | Sentence | denotes | By contrast, only one child has wild cough and two children have a mild fever (37.4–38.5°C). |
| T67 | 977-1085 | Sentence | denotes | None of the nine children required intensive care or mechanical ventilation or had any severe complications. |
| T68 | 1086-1274 | Sentence | denotes | For the 14 adult patients, the main clinical symptoms were fever (8/14, 57.1%), cough (5/14, 35.7%), chest tightness/pain (3/14, 21.4%), fatigue (3/14, 21.4%) and sore throat (1/14, 7.1%). |
| T69 | 1275-1336 | Sentence | denotes | Meanwhile, there were four patients had no clinical symptoms. |
| T70 | 1337-1592 | Sentence | denotes | From the epidemiological data, 7/14(50%) of the adults were infected through household contact, 5 (35.8%) was found to be infected after returning from Wuhan or Hubei in late January 2019 and 2 (14.2%) patients couldn’t find the exact source of infection. |
| T71 | 1594-1635 | Sentence | denotes | Laboratory tests and imaging examinations |
| T72 | 1636-1786 | Sentence | denotes | As shown in Table 2, 8/9 (88.9%) children had normal or decreased white blood cell counts, consistent with the main characteristic of viral infection. |
| T73 | 1787-1831 | Sentence | denotes | Six children (66.7%) showed increased CK-MB. |
| T74 | 1832-1897 | Sentence | denotes | ALT, AST and the other index of liver and kidney were all normal. |
| T75 | 1898-1993 | Sentence | denotes | All inflammation indicators, including CRP, PCT, ESR and IL-6 were all within the normal range. |
| T76 | 1994-2076 | Sentence | denotes | Two children (22.2%) showed bronchitis and one (11.1%) showed bronchial pneumonia. |
| T77 | 2077-2277 | Sentence | denotes | One (11.1%) boy (the older of the twins) showed pulmonary consolidation and ground glass opacity on the first day (Figure 1(A)) admitted in the hospital, and disappeared after five days (Figure 1(B)). |
| T78 | 2278-2342 | Sentence | denotes | Five other (55.6%) children showed no abnormal chest radiograph. |
| T79 | 2343-2352 | Sentence | denotes | Figure 1: |
| T80 | 2353-2741 | Sentence | denotes | Chest CT images of a case 7 and case 8 (one pair of 11 month old twins) patient upon admission, who had no symptom. (A) Transverse chest CT images showed pulmonary consolidation and ground glass opacity (case 7 on 7 February). (B) Showed marked improvement after 5 days (case 7 on 13 February). (C) Lung CT of case 8 – the case 7’s younger brother on admission day (case 8 on 7 February). |
| T81 | 2742-2750 | Sentence | denotes | Table 2. |
| T82 | 2751-2800 | Sentence | denotes | The laboratory results of nine children patients. |
| T83 | 2801-2809 | Sentence | denotes | Case no. |
| T84 | 2810-3053 | Sentence | denotes | WBC (109/L) N (%) L (%) PLT (109/L) Hb (g/L) CRP (mg/L) ESR (mm/h) PCT (ug/L) IL-6 (pg/ml) ALT (U/L) AST (U/L) CK-MB (U/L) CD4 (%) CD8 (%) NK (%) IgM (g/L) IgA (g/L) IgG (g/L) C3 (g/L) C4 (g/L) Ferritin D-dimer Myoglobin (ug/l) BNP (pg/ml) SAA |
| T85 | 3054-3153 | Sentence | denotes | 1 8.48 32.1 59.9 361 128 0.12 5 0.04 1.5 13 35 34 31.9 34.6 16.5 1.0 0.6 7 0.8 0.2 45.5 0.3 9 133 3 |
| T86 | 3154-3255 | Sentence | denotes | 2 7.55 20.4 73.6 193 120 0.35 2 0.08 1.5 14 33 28 28.3 27.1 27.3 1.2 0.8 7.3 0.8 0.3 33.6 0.3 11 24 4 |
| T87 | 3256-3354 | Sentence | denotes | 3 3.78 38.7 43.9 293 119 0.19 7 0.05 1.5 15 28 23 33.2 35.6 – 1.1 1.6 12.9 1.0 0.2 85.6 0.4 9 29 3 |
| T88 | 3355-3428 | Sentence | denotes | 4 4.14 23.6 69.3 65 129 0.18 6 0.04 1.5 14 28 30 46.6 20.2 8.5 1.1 0.8 6. |
| T89 | 3429-3452 | Sentence | denotes | 9 1.0 0.2 – 0.2 9 116 5 |
| T90 | 3453-3553 | Sentence | denotes | 5 3.69 33.8 53.3 169 106 0.12 5 0.03 1.5 15 23 22 45.7 33.4 14,8 0.9 0.6 8.1 0.1 1.0 48.1 0.1 9 87 3 |
| T91 | 3554-3655 | Sentence | denotes | 6 9.33 27.8 66.7 278 133 0.24 2 0.08 1.5 13 36 76 36.9 22.6 16.7 1.6 1.7 16.3 1.0 0.2 50.7 0.2 9 39 6 |
| T92 | 3656-3748 | Sentence | denotes | 7 11.17 17.2 77.4 305 117 0.19 2 0.04 1.5 22 39 43 – – – 1.3 0.3 7.1 0.7 0.1 62.6 0.3 9 31 3 |
| T93 | 3749-3839 | Sentence | denotes | 8 9.42 24.5 68.6 358 116 0.19 2 0.04 1.5 22 42 52 – – – 0.6 0.2 7.0 0.7 0.1 59.7 0.3 9 2 3 |
| T94 | 3840-3910 | Sentence | denotes | 9 5.45 41.2 53.0 235 140 0.26 3 0.02 1.5 9 24 27 33.1 29.3 16.5 1.3 1. |
| T95 | 3911-3941 | Sentence | denotes | 6 8.9 1.0 0.2 45.6 0.3 18 23 5 |
| T96 | 3942-4348 | Sentence | denotes | Note: WBC, white blood cell; N, Neutrophil; L, Lymphocyte; PLT, plate; Hb, Hemoglobin; ESR, erythrocyte sedimentation; PCT, Procalcitonin; ALT, alanine aminotransferase; AST, aspartate aminotransferase; CK-MB, creatine kinase MB; IgM, Immunoglobulin M; IgG, Immunoglobulin G; Ig, Immunoglobulin A; C3, complement3; C4, complement4; BNP, N-terminal brain natriuretic peptide precursor; SAA, Serum amyloid A. |
| T97 | 4349-4481 | Sentence | denotes | All the adult patients had normal (10/14, 71.4%) or decreased (4/14, 28.6%) white blood cell counts and 10 (71.4%) have lymphopenia. |
| T98 | 4482-4635 | Sentence | denotes | There were 4 (28.6%) patients had increased CRP, PCT, Serum amyloid A (SAA), D-dimer and IL-6, meanwhile, their CT-scan showed larger lung consolidation. |
| T99 | 4636-4718 | Sentence | denotes | Compared to children, there were only two (14.3%) patients showed increased CK-MB. |
| T100 | 4719-4824 | Sentence | denotes | Ferritin in the adult patients were higher than the children but most of them were normal (11/14, 78.6%). |
| T101 | 4825-5011 | Sentence | denotes | The imaging of adult chest was mix and the most common characters of imaging were pulmonary consolidation (50%), nodular shadow (42.9%), and ground glass opacity (GGO, 35.7%) (Figure 2). |
| T102 | 5012-5060 | Sentence | denotes | Four (28.6%) adults showed normal chest imaging. |
| T103 | 5061-5070 | Sentence | denotes | Figure 2. |
| T104 | 5071-5623 | Sentence | denotes | Lung computed tomography (CT) images of case 7 and case 8’s families. (A) The CT of their grandpa, who was 72-year-old and admitted for symptoms of high fever for 3 days. (B) CT scan of case their father, a 38-year-old patient admitted for symptoms of high fever, shortness of breath and fatigue for 10 days on his admission day. (C) Lung CT image of their mother, a 32-year-old female patient admitted for positive result of PCR (C). (D) Chest CT of the twins’ grandma, 65 years old and had fever, dry cough and chest pain for 6 days before admission. |
| T105 | 5625-5656 | Sentence | denotes | Treatment regimen and prognosis |
| T106 | 5657-5725 | Sentence | denotes | At present, there are no drugs available that can target SARS-CoV-2. |
| T107 | 5726-5798 | Sentence | denotes | Therefore, treatment was focused on symptomatic and respiratory support. |
| T108 | 5799-5909 | Sentence | denotes | All the children inhaled interferon and one of the twins was prescribed ribavirin (10–15 mg/kg.d) in addition. |
| T109 | 5910-6036 | Sentence | denotes | Ten (71.4%) adults with pneumonia were treated Lopinaviritonavir (200/50 mg, 2 tablets, bid), interferon and Chinese medicine. |
| T110 | 6037-6165 | Sentence | denotes | The patients with higher infection index (such as CRP, PCT, ESR, SAA, IL-6) were prescript antibiotics for 5–7 days in addition. |
| T111 | 6166-6291 | Sentence | denotes | All the nine children and 14 adult patients recovered in 2–3 weeks and were discharged after two negative nucleic acid tests. |
| T112 | 6292-6479 | Sentence | denotes | Unfortunately, our follow up found that there were five discharged children were admitted again before we submit this article because their stool showed positive result in SARS-CoV-2 PCR. |
| T113 | 6480-6544 | Sentence | denotes | Meanwhile, all their families were negative in all the specimen. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T18 | 921-926 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T19 | 951-961 | Phenotype | denotes | mild fever | http://purl.obolibrary.org/obo/HP_0011134 |
| T20 | 1145-1150 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T21 | 1166-1171 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T22 | 1187-1202 | Phenotype | denotes | chest tightness | http://purl.obolibrary.org/obo/HP_0031352 |
| T23 | 1203-1207 | Phenotype | denotes | pain | http://purl.obolibrary.org/obo/HP_0012531 |
| T24 | 1223-1230 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T25 | 1249-1260 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
| T26 | 2022-2032 | Phenotype | denotes | bronchitis | http://purl.obolibrary.org/obo/HP_0012387 |
| T27 | 2066-2075 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T28 | 4469-4480 | Phenotype | denotes | lymphopenia | http://purl.obolibrary.org/obo/HP_0001888 |
| T29 | 5224-5229 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T30 | 5328-5333 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T31 | 5335-5354 | Phenotype | denotes | shortness of breath | http://purl.obolibrary.org/obo/HP_0002098 |
| T32 | 5359-5366 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T33 | 5563-5568 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T34 | 5570-5579 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
| T35 | 5584-5594 | Phenotype | denotes | chest pain | http://purl.obolibrary.org/obo/HP_0100749 |
| T36 | 5934-5943 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 150 | 46-50 | Species | denotes | boys | Tax:9606 |
| 151 | 56-61 | Species | denotes | girls | Tax:9606 |
| 152 | 211-219 | Species | denotes | children | Tax:9606 |
| 153 | 400-410 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 154 | 459-467 | Species | denotes | patients | Tax:9606 |
| 155 | 510-518 | Species | denotes | patients | Tax:9606 |
| 156 | 102-120 | Disease | denotes | Infectious Disease | MESH:D003141 |
| 157 | 388-396 | Disease | denotes | infected | MESH:D007239 |
| 165 | 673-681 | Species | denotes | patients | Tax:9606 |
| 166 | 733-741 | Species | denotes | children | Tax:9606 |
| 167 | 906-911 | Species | denotes | child | Tax:9606 |
| 168 | 935-943 | Species | denotes | children | Tax:9606 |
| 169 | 994-1002 | Species | denotes | children | Tax:9606 |
| 170 | 921-926 | Disease | denotes | cough | MESH:D003371 |
| 171 | 956-961 | Disease | denotes | fever | MESH:D005334 |
| 183 | 1103-1111 | Species | denotes | patients | Tax:9606 |
| 184 | 1302-1310 | Species | denotes | patients | Tax:9606 |
| 185 | 1539-1547 | Species | denotes | patients | Tax:9606 |
| 186 | 1145-1150 | Disease | denotes | fever | MESH:D005334 |
| 187 | 1166-1171 | Disease | denotes | cough | MESH:D003371 |
| 188 | 1187-1207 | Disease | denotes | chest tightness/pain | MESH:D002637 |
| 189 | 1223-1230 | Disease | denotes | fatigue | MESH:D005221 |
| 190 | 1249-1260 | Disease | denotes | sore throat | MESH:D010608 |
| 191 | 1397-1405 | Disease | denotes | infected | MESH:D007239 |
| 192 | 1459-1467 | Disease | denotes | infected | MESH:D007239 |
| 193 | 1582-1591 | Disease | denotes | infection | MESH:D007239 |
| 195 | 2425-2432 | Species | denotes | patient | Tax:9606 |
| 203 | 2855-2858 | Gene | denotes | CRP | Gene:1401 |
| 204 | 2888-2892 | Gene | denotes | IL-6 | Gene:3569 |
| 205 | 2911-2914 | Gene | denotes | AST | Gene:26503 |
| 206 | 2933-2936 | Gene | denotes | CD4 | Gene:920 |
| 207 | 3021-3030 | Gene | denotes | Myoglobin | Gene:4151 |
| 208 | 3038-3041 | Gene | denotes | BNP | Gene:4879 |
| 209 | 3050-3053 | Gene | denotes | SAA | Gene:6287 |
| 212 | 2782-2790 | Species | denotes | children | Tax:9606 |
| 213 | 2791-2799 | Species | denotes | patients | Tax:9606 |
| 220 | 4086-4110 | Gene | denotes | alanine aminotransferase | Gene:2875 |
| 221 | 4112-4115 | Gene | denotes | AST | Gene:26503 |
| 222 | 4274-4277 | Gene | denotes | BNP | Gene:4879 |
| 223 | 4327-4330 | Gene | denotes | SAA | Gene:6287 |
| 224 | 4332-4347 | Gene | denotes | Serum amyloid A | Gene:6287 |
| 225 | 4244-4255 | Gene | denotes | complement3 | Gene:718 |
| 238 | 1837-1840 | Gene | denotes | AST | Gene:26503 |
| 239 | 1937-1940 | Gene | denotes | CRP | Gene:1401 |
| 240 | 1955-1959 | Gene | denotes | IL-6 | Gene:3569 |
| 241 | 1669-1677 | Species | denotes | children | Tax:9606 |
| 242 | 1791-1799 | Species | denotes | children | Tax:9606 |
| 243 | 1998-2006 | Species | denotes | children | Tax:9606 |
| 244 | 2089-2092 | Species | denotes | boy | Tax:9606 |
| 245 | 2297-2305 | Species | denotes | children | Tax:9606 |
| 246 | 1770-1785 | Disease | denotes | viral infection | MESH:D001102 |
| 247 | 1902-1914 | Disease | denotes | inflammation | MESH:D007249 |
| 248 | 2022-2032 | Disease | denotes | bronchitis | MESH:D001991 |
| 249 | 2066-2075 | Disease | denotes | pneumonia | MESH:D011014 |
| 259 | 5290-5297 | Species | denotes | patient | Tax:9606 |
| 260 | 5457-5464 | Species | denotes | patient | Tax:9606 |
| 261 | 5219-5229 | Disease | denotes | high fever | MESH:D005334 |
| 262 | 5323-5333 | Disease | denotes | high fever | MESH:D005334 |
| 263 | 5335-5354 | Disease | denotes | shortness of breath | MESH:D004417 |
| 264 | 5359-5366 | Disease | denotes | fatigue | MESH:D005221 |
| 265 | 5563-5568 | Disease | denotes | fever | MESH:D005334 |
| 266 | 5570-5579 | Disease | denotes | dry cough | MESH:D003371 |
| 267 | 5584-5594 | Disease | denotes | chest pain | MESH:D002637 |
| 279 | 4526-4529 | Gene | denotes | CRP | Gene:1401 |
| 280 | 4536-4551 | Gene | denotes | Serum amyloid A | Gene:6287 |
| 281 | 4553-4556 | Gene | denotes | SAA | Gene:6287 |
| 282 | 4571-4575 | Gene | denotes | IL-6 | Gene:3569 |
| 283 | 4363-4371 | Species | denotes | patients | Tax:9606 |
| 284 | 4503-4511 | Species | denotes | patients | Tax:9606 |
| 285 | 4648-4656 | Species | denotes | children | Tax:9606 |
| 286 | 4686-4694 | Species | denotes | patients | Tax:9606 |
| 287 | 4741-4749 | Species | denotes | patients | Tax:9606 |
| 288 | 4771-4779 | Species | denotes | children | Tax:9606 |
| 289 | 4469-4480 | Disease | denotes | lymphopenia | MESH:D008231 |
| 306 | 5998-6001 | Gene | denotes | bid | Gene:637 |
| 307 | 6087-6090 | Gene | denotes | CRP | Gene:1401 |
| 308 | 6102-6105 | Gene | denotes | SAA | Gene:6287 |
| 309 | 6107-6111 | Gene | denotes | IL-6 | Gene:3569 |
| 310 | 5714-5724 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 311 | 5807-5815 | Species | denotes | children | Tax:9606 |
| 312 | 6041-6049 | Species | denotes | patients | Tax:9606 |
| 313 | 6179-6187 | Species | denotes | children | Tax:9606 |
| 314 | 6201-6209 | Species | denotes | patients | Tax:9606 |
| 315 | 6359-6367 | Species | denotes | children | Tax:9606 |
| 316 | 6464-6474 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 317 | 5778-5789 | Species | denotes | respiratory | Tax:12814 |
| 318 | 5871-5880 | Chemical | denotes | ribavirin | MESH:D012254 |
| 319 | 5957-5974 | Chemical | denotes | Lopinaviritonavir | |
| 320 | 5934-5943 | Disease | denotes | pneumonia | MESH:D011014 |
| 321 | 6062-6071 | Disease | denotes | infection | MESH:D007239 |