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LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T40 684-703 Disease denotes zoonotic infections http://purl.obolibrary.org/obo/MONDO_0025481
T41 1350-1360 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T53 746-748 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T54 769-770 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T55 899-901 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T56 899-901 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T57 979-981 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T58 1152-1154 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T59 1270-1272 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T60 1532-1533 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 1768-1769 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T62 2032-2033 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T63 2056-2057 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T64 2344-2346 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T65 2344-2346 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T66 2388-2389 http://purl.obolibrary.org/obo/CLO_0001021 denotes b

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T6 899-901 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T7 2344-2346 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T100 0-37 Sentence denotes We show our simulations in Figure 4 .
T101 38-173 Sentence denotes Under the naive scenario, we assume governmental action strength α  = 0 and intensity of individual reaction κ  = 0, which is unlikely.
T102 174-323 Sentence denotes The second scenario is when we only consider “individual reaction”, both the peak value and the number of cumulative cases are substantially reduced.
T103 324-451 Sentence denotes The third scenario is considering both “individual reaction” and “governmental action”, and the reduction becomes even further.
T104 452-630 Sentence denotes We highlight the third scenario, as we know the individual reaction and governmental action existed and played important role in previous epidemic and pandemic (He et al., 2013).
T105 631-794 Sentence denotes Our third scenario implies that• The total number of zoonotic infections was 145 which corresponds to the reported 41 zoonotic cases with a reporting rate of ≈28%.
T106 795-898 Sentence denotes This level is largely in line with estimates of Riou and Althaus (2020), Nishiura et al. (2020), and Q.
T107 899-916 Sentence denotes Li et al. (2020).
T108 917-1062 Sentence denotes • The cumulative number of cases in Wuhan was 4648 by January 18, 2020, which is in line with estimates of other teams (Bogoch et al., 2020, J.T.
T109 1063-1095 Sentence denotes Wu et al., 2020, NCPERET, 2020).
T110 1096-1169 Sentence denotes • The cumulative number of cases in Wuhan was 16,589 by 27 January, 2020.
T111 1170-1208 Sentence denotes Compared with estimates 25,630 (95%CI:
T112 1209-1332 Sentence denotes 12,260–44,440), announced by University of Hong Kong team on 27 January, 2020, our estimate is low but in their the 95% CI.
T113 1333-1411 Sentence denotes • The cumulative infections could be 84,116 in Wuhan by the end of April 2020.
T114 1412-1627 Sentence denotes • We compare simulated and reported numbers, and reconstruct the daily reporting ratio, which shows an improvement from a level of below 10% to around 50% from January 2020 to February 2020 and reflects the reality.
T115 1628-1857 Sentence denotes • Due to adjustment of the reporting policy, i.e., an effort to report all clinical cases accumulated in the past few days/weeks, there are a few days where the number of reported cases are artificially high than simulated cases.
T116 1858-2021 Sentence denotes The reason is that the reported cases in these few days included clinical cases but not laboratory confirmed that are accumulated in the past few days, also weeks.
T117 2022-2510 Sentence denotes Figure 4 (a) Daily new cases with a reporting delay of 14 days under three scenarios: naive (i.e., no action taken) as grey dotted curve, individual reaction regarding to the outbreak as red dashed curve, and individual reaction plus governmental action as green solid curve and reported cases (from official release and (Li et al., 2020) as grey curve with dotes. (b) The reporting ratio between reported cases and estimates when individual reaction and governmental action are involved.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
116 684-703 Disease denotes zoonotic infections MESH:D015047
117 749-757 Disease denotes zoonotic MESH:D015047
119 1350-1360 Disease denotes infections MESH:D007239