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PMC:7102659 / 10184-11761 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T3 990-994 Body_part denotes back http://purl.org/sig/ont/fma/fma25056

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T37 414-422 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T38 877-885 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T39 1185-1199 Disease denotes infectiousness http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T41 294-295 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T42 307-308 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T43 673-675 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T44 673-675 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T45 805-806 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T46 1006-1008 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T47 1006-1008 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T48 1097-1098 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T49 1383-1385 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T50 1383-1385 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T51 1412-1414 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T52 1412-1414 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 673-675 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T2 938-943 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T3 1006-1008 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T4 1383-1385 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T5 1412-1414 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T82 0-13 Sentence denotes Data analyses
T83 14-87 Sentence denotes We summarise the officially reported data from Wuhan, China in Figure 2 .
T84 88-155 Sentence denotes There is an increasing trend of daily new confirmations and deaths.
T85 156-263 Sentence denotes We argue that these data were heavily impacted by availability of medical supplies and health care workers.
T86 264-439 Sentence denotes Figure 2 The daily number of (a) cases or (b) deaths, cumulative number of (c) cases or (d) deaths, and the percentage of (e) cases or (f) deaths, of COVID-19 in Wuhan, China.
T87 440-509 Sentence denotes In panel (f), the 100% represents the count of deaths or cured cases.
T88 510-577 Sentence denotes The official data report was not available before January 15, 2020.
T89 578-650 Sentence denotes We fill the missing data before that from several retrospective studies.
T90 651-672 Sentence denotes Among them data in R.
T91 673-780 Sentence denotes Li et al. (2020) are daily symptom onset records, while those in Liu et al. (2020) are daily confirmations.
T92 781-971 Sentence denotes We notice that there is a delay of 14 days between symptom onset and laboratory confirmation of COVID-19 between the two datasets which are largely the same group of patients, see Figure 3 .
T93 972-1005 Sentence denotes Namely, if we put back data in R.
T94 1006-1080 Sentence denotes Li et al. (2020) by 14 days, it largely matches data in Liu et al. (2020).
T95 1081-1261 Sentence denotes Thus, we assume a proportion of daily cases (reporting rate) will be reported after 14 days since their infectiousness onset (which is generally no later than their symptom onset).
T96 1262-1513 Sentence denotes Figure 3 Comparison between different sources of reported cases: official released data (NHCPRC, 2020) in red, data from Li et al. (denoted as NEJM) (Li et al., 2020) in green, from Liu et al. (denoted as GDCDC) (Liu et al., 2020) in blue, and from P.
T97 1514-1549 Sentence denotes Wu et al. (denoted as Eurosurv) (P.
T98 1550-1577 Sentence denotes Wu et al., 2020) in purple.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
103 310-316 Disease denotes deaths MESH:D003643
104 356-362 Disease denotes deaths MESH:D003643
105 403-409 Disease denotes deaths MESH:D003643
106 414-422 Disease denotes COVID-19 MESH:C000657245
107 487-493 Disease denotes deaths MESH:D003643
109 148-154 Disease denotes deaths MESH:D003643
112 947-955 Species denotes patients Tax:9606
113 877-885 Disease denotes COVID-19 MESH:C000657245