> top > docs > PMC:7102591 > spans > 13585-14708 > annotations

PMC:7102591 / 13585-14708 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
449 991-994 Gene denotes MTX Gene:4580
450 68-76 Species denotes patients Tax:9606
451 639-647 Species denotes patients Tax:9606
452 972-980 Species denotes patients Tax:9606
453 737-749 Chemical denotes methotrexate MESH:D008727
454 791-809 Chemical denotes hydroxychloroquine MESH:D006886
455 160-162 Disease denotes RA MESH:D001172
456 248-250 Disease denotes RA MESH:D001172
457 390-399 Disease denotes infection MESH:D007239
458 527-536 Disease denotes infection MESH:D007239
459 723-732 Disease denotes infection MESH:D007239
460 959-968 Disease denotes infection MESH:D007239
461 1101-1110 Disease denotes infection MESH:D007239

LitCovid_AGAC

Id Subject Object Predicate Lexical cue
p51595s16 694-701 NegReg denotes reduced

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T178 49-59 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T179 160-162 Disease denotes RA http://purl.obolibrary.org/obo/MONDO_0005272|http://purl.obolibrary.org/obo/MONDO_0008383
T181 248-250 Disease denotes RA http://purl.obolibrary.org/obo/MONDO_0005272|http://purl.obolibrary.org/obo/MONDO_0008383
T183 390-399 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T184 527-536 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T185 710-732 Disease denotes hospitalized infection http://purl.obolibrary.org/obo/MONDO_0043544
T186 723-732 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T187 959-968 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T188 1101-1110 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T103 102-103 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T104 141-142 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T105 213-214 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T106 365-366 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T107 653-654 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T108 683-684 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T109 848-850 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T110 853-854 http://purl.obolibrary.org/obo/CLO_0001020 denotes A

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T108 160-162 Chemical denotes RA http://purl.obolibrary.org/obo/CHEBI_73810
T109 248-250 Chemical denotes RA http://purl.obolibrary.org/obo/CHEBI_73810
T110 329-344 Chemical denotes corticosteroids http://purl.obolibrary.org/obo/CHEBI_50858
T111 427-429 Chemical denotes RR http://purl.obolibrary.org/obo/CHEBI_73811
T112 552-554 Chemical denotes RR http://purl.obolibrary.org/obo/CHEBI_73811
T113 737-749 Chemical denotes methotrexate http://purl.obolibrary.org/obo/CHEBI_44185|http://purl.obolibrary.org/obo/CHEBI_50681
T115 760-762 Chemical denotes RR http://purl.obolibrary.org/obo/CHEBI_73811
T116 791-809 Chemical denotes hydroxychloroquine http://purl.obolibrary.org/obo/CHEBI_5801
T117 820-822 Chemical denotes RR http://purl.obolibrary.org/obo/CHEBI_73811
T118 991-994 Chemical denotes MTX http://purl.obolibrary.org/obo/CHEBI_44185
T119 996-998 Chemical denotes RR http://purl.obolibrary.org/obo/CHEBI_73811

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T71 0-13 Sentence denotes 4.2 csDMARDs
T72 14-304 Sentence denotes The most comprehensive analysis of infectious risk in patients treated with csDMARDs is a retrospective, longitudinal study of a population-based RA cohort using an administrative database including a total of 27,710 individuals with RA and providing 162,710 person-years of follow-up [51].
T73 305-578 Sentence denotes Use of csDMARDs without corticosteroids was associated with a small decrease in mild infection risk (adjusted rate ratio [RR] 0.90, 95% confidence interval [95% CI] 0.88–0.93) and was not associated with increased serious infection risk (adjusted RR 0.92, 95% CI 0.85–1.0).
T74 579-852 Sentence denotes Similarly, another retrospective analysis conducted on 1993 patients from a claim database demonstrated a slightly reduced risk of hospitalized infection for methotrexate (adjusted RR 0.81, 95% CI 0.70–0.93) and hydroxychloroquine (adjusted RR 0.74, 95% CI 0.62–0.89) [52].
T75 853-999 Sentence denotes A recent systematic review and meta-analysis of the literature confirmed the lack of an increased risk of infection in patients receiving MTX (RR:
T76 1000-1030 Sentence denotes 1.14; 95% CI, 0.98–1.34) [53].
T77 1031-1123 Sentence denotes However, all these reports provided no data on the risk of stratified infection by pathogen.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T59 160-162 Phenotype denotes RA http://purl.obolibrary.org/obo/HP_0001370
T60 248-250 Phenotype denotes RA http://purl.obolibrary.org/obo/HP_0001370

2_test

Id Subject Object Predicate Lexical cue
32205186-18668604-4826892 300-302 18668604 denotes 51
32205186-18260176-4826893 848-850 18260176 denotes 52