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PMC:7102591 / 1263-2448 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
52 103-113 Species denotes SARS-CoV-2 Tax:2697049
53 140-153 Species denotes coronavirus 2 Tax:2697049
54 309-317 Species denotes SARS-CoV Tax:694009
55 347-357 Species denotes SARS-CoV-2 Tax:2697049
56 524-532 Species denotes patients Tax:9606
57 128-139 Species denotes respiratory Tax:12814
58 31-40 Disease denotes pneumonia MESH:D011014
59 378-387 Disease denotes dry cough MESH:D003371
60 389-394 Disease denotes fever MESH:D005334
61 396-403 Disease denotes dyspnea MESH:D004417
62 408-415 Disease denotes fatigue MESH:D005221
63 432-443 Disease denotes lymphopenia MESH:D008231
64 515-523 Disease denotes infected MESH:D007239
65 603-612 Disease denotes pneumonia MESH:D011014
66 618-633 Disease denotes alveolar damage MESH:D055370
67 671-706 Disease denotes Acute Respiratory Distress Syndrome MESH:D012128
68 708-712 Disease denotes ARDS MESH:D012128
69 723-728 Disease denotes death MESH:D003643
70 895-903 Disease denotes COVID-19 MESH:C000657245
71 1174-1180 Disease denotes deaths MESH:D003643

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T2 284-294 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T3 618-626 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T23 31-40 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T24 103-111 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T25 309-317 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T26 347-355 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T27 432-443 Disease denotes lymphopenia http://purl.obolibrary.org/obo/MONDO_0003783
T28 603-612 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T29 671-706 Disease denotes Acute Respiratory Distress Syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T30 677-706 Disease denotes Respiratory Distress Syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T31 708-712 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T32 895-903 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T5 17-18 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 54-55 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 256-257 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 268-273 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T9 446-452 http://purl.obolibrary.org/obo/CLO_0001302 denotes 3], [4
T10 775-778 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T11 783-784 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 842-854 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T13 904-905 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 980-981 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T9 284-294 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T10 0-207 Sentence denotes In December 2019 a new type of pneumonia supported by a novel member of the coronoviridae family named SARS-CoV-2 (severe acute respiratory coronavirus 2 syndrome) developed from Wuhan Province in China [1].
T11 208-324 Sentence denotes Phylogenetic analysis demonstrated that this is a different virus with ~80% nucleotide identity with SARS-CoV-1 [2].
T12 325-465 Sentence denotes The disease caused by SARS-CoV-2 is characterized by dry cough, fever, dyspnea and fatigue, accompanied by lymphopenia [[3], [4], [5], [6]].
T13 466-733 Sentence denotes In more severe cases (apparently up to 15–20% of infected patients) the picture may become more complicated by the onset of interstitial pneumonia with alveolar damage, which clinically can lead to severe Acute Respiratory Distress Syndrome (ARDS) and even death [7].
T14 734-1010 Sentence denotes Since the initial outbreak, the epidemic has had a rapid global spread worldwide which led the World Health Organization (WHO) to declare the disease now called COVID-19 a Public Health Emergency of International Concern on 30th January 2020 and a pandemic on 11th March 2020.
T15 1011-1185 Sentence denotes The epidemiological picture is constantly evolving, and data updated as of March 17th count 159 countries involved with more than 185,000 cases and 7500 confirmed deaths [8].

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T7 31-40 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T8 378-387 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T9 389-394 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T10 396-403 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T11 408-415 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T12 432-443 Phenotype denotes lymphopenia http://purl.obolibrary.org/obo/HP_0001888
T13 603-612 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T14 677-697 Phenotype denotes Respiratory Distress http://purl.obolibrary.org/obo/HP_0002098

2_test

Id Subject Object Predicate Lexical cue
32205186-32015507-4826866 204-205 32015507 denotes 1