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PMC:7102591 / 10269-11472 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
333 801-803 Gene denotes CS Gene:1431
334 1176-1178 Gene denotes CS Gene:1431
335 942-944 Gene denotes CS Gene:1431
336 620-622 Gene denotes CS Gene:1431
337 291-293 Gene denotes CS Gene:1431
338 57-59 Gene denotes CS Gene:1431
339 665-673 Species denotes patients Tax:9606
340 779-787 Species denotes patients Tax:9606
341 923-931 Species denotes patients Tax:9606
342 1159-1166 Species denotes patient Tax:9606
343 77-79 Disease denotes RA MESH:D001172
344 260-262 Disease denotes RA MESH:D001172
345 326-338 Disease denotes inflammation MESH:D007249
346 346-348 Disease denotes RA MESH:D001172
347 472-482 Disease denotes infections MESH:D007239
348 560-569 Disease denotes infection MESH:D007239
349 648-658 Disease denotes infections MESH:D007239
350 662-664 Disease denotes RA MESH:D001172
351 762-772 Disease denotes infections MESH:D007239
352 776-778 Disease denotes RA MESH:D001172
353 920-922 Disease denotes RA MESH:D001172
354 987-1003 Disease denotes viral infections MESH:D001102
355 1095-1112 Disease denotes Zoster infections MESH:D006562

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T49 57-59 Body_part denotes CS http://purl.org/sig/ont/fma/fma284995
T50 291-293 Body_part denotes CS http://purl.org/sig/ont/fma/fma284995
T51 620-622 Body_part denotes CS http://purl.org/sig/ont/fma/fma284995
T52 801-803 Body_part denotes CS http://purl.org/sig/ont/fma/fma284995
T53 942-944 Body_part denotes CS http://purl.org/sig/ont/fma/fma284995
T54 1176-1178 Body_part denotes CS http://purl.org/sig/ont/fma/fma284995

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T139 77-79 Disease denotes RA http://purl.obolibrary.org/obo/MONDO_0005272|http://purl.obolibrary.org/obo/MONDO_0008383
T141 260-262 Disease denotes RA http://purl.obolibrary.org/obo/MONDO_0005272|http://purl.obolibrary.org/obo/MONDO_0008383
T143 326-338 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T144 346-348 Disease denotes RA http://purl.obolibrary.org/obo/MONDO_0005272|http://purl.obolibrary.org/obo/MONDO_0008383
T146 472-482 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T147 560-569 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T148 648-661 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T149 662-664 Disease denotes RA http://purl.obolibrary.org/obo/MONDO_0005272|http://purl.obolibrary.org/obo/MONDO_0008383
T151 762-775 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T152 776-778 Disease denotes RA http://purl.obolibrary.org/obo/MONDO_0005272|http://purl.obolibrary.org/obo/MONDO_0008383
T154 871-881 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T155 920-922 Disease denotes RA http://purl.obolibrary.org/obo/MONDO_0005272|http://purl.obolibrary.org/obo/MONDO_0008383
T157 987-1003 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T158 1095-1101 Disease denotes Zoster http://purl.obolibrary.org/obo/MONDO_0005609
T159 1102-1112 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T81 3-6 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T82 184-187 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T83 274-276 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T84 688-690 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T85 818-819 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T86 953-954 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T87 1020-1021 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T70 40-55 Chemical denotes corticosteroids http://purl.obolibrary.org/obo/CHEBI_50858
T71 57-59 Chemical denotes CS http://purl.obolibrary.org/obo/CHEBI_73462|http://purl.obolibrary.org/obo/CHEBI_50858
T73 77-79 Chemical denotes RA http://purl.obolibrary.org/obo/CHEBI_73810
T74 260-262 Chemical denotes RA http://purl.obolibrary.org/obo/CHEBI_73810
T75 291-293 Chemical denotes CS http://purl.obolibrary.org/obo/CHEBI_73462|http://purl.obolibrary.org/obo/CHEBI_50858
T77 346-348 Chemical denotes RA http://purl.obolibrary.org/obo/CHEBI_73810
T78 620-622 Chemical denotes CS http://purl.obolibrary.org/obo/CHEBI_73462|http://purl.obolibrary.org/obo/CHEBI_50858
T80 662-664 Chemical denotes RA http://purl.obolibrary.org/obo/CHEBI_73810
T81 776-778 Chemical denotes RA http://purl.obolibrary.org/obo/CHEBI_73810
T82 801-803 Chemical denotes CS http://purl.obolibrary.org/obo/CHEBI_73462|http://purl.obolibrary.org/obo/CHEBI_50858
T84 920-922 Chemical denotes RA http://purl.obolibrary.org/obo/CHEBI_73810
T85 942-944 Chemical denotes CS http://purl.obolibrary.org/obo/CHEBI_73462|http://purl.obolibrary.org/obo/CHEBI_50858
T87 1176-1178 Chemical denotes CS http://purl.obolibrary.org/obo/CHEBI_73462|http://purl.obolibrary.org/obo/CHEBI_50858

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T15 326-338 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T16 987-1003 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T55 0-278 Sentence denotes It has now been more than 70 years that corticosteroids (CS) are pivotal for RA management and their role as remission inducer and bridging therapy for the management of disease flare has recently been renewed by the latest update of EULAR recommendations for RA treatment [36].
T56 279-578 Sentence denotes Even though CS efficacy in rapidly suppressing inflammation during RA initial course or flares is well recognized [37], their downside is the broad spectrum of adverse events, including severe infections and the high risk of developing comorbidities further increasing the risk of infection [27,38].
T57 579-848 Sentence denotes Although RCTs conducted in the past with CS showed no higher risk of infections in RA patients [[39], [40], [41]], cohort and case-control studies reported increased rates of overall infections in RA patients treated with CS, according to a dose-dependent fashion [42].
T58 849-1004 Sentence denotes The majority of these infectious events are of bacterial etiology, but RA patients receiving CS exhibit a greater risk of developing even viral infections.
T59 1005-1203 Sentence denotes As an example, a 2012 retrospective cohort-study demonstrated an increased risk of Herpes Zoster infections with an incidence rate of 8.54 cases per 1000 patient-years in CS treated population [29].

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T50 77-79 Phenotype denotes RA http://purl.obolibrary.org/obo/HP_0001370
T51 260-262 Phenotype denotes RA http://purl.obolibrary.org/obo/HP_0001370
T52 346-348 Phenotype denotes RA http://purl.obolibrary.org/obo/HP_0001370
T53 465-482 Phenotype denotes severe infections http://purl.obolibrary.org/obo/HP_0032169
T54 662-664 Phenotype denotes RA http://purl.obolibrary.org/obo/HP_0001370
T55 776-778 Phenotype denotes RA http://purl.obolibrary.org/obo/HP_0001370
T56 920-922 Phenotype denotes RA http://purl.obolibrary.org/obo/HP_0001370

2_test

Id Subject Object Predicate Lexical cue
32205186-31396235-4826883 394-396 31396235 denotes 37
32205186-23192911-4826884 571-573 23192911 denotes 27
32205186-17870034-4826885 574-576 17870034 denotes 38
32205186-9251634-4826886 676-678 9251634 denotes 39
32205186-22393128-4826887 688-690 22393128 denotes 41
32205186-21884589-4826888 844-846 21884589 denotes 42