PMC:7102560 / 7651-8330
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T33 | 227-232 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T34 | 303-308 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T35 | 372-379 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T36 | 423-430 | Body_part | denotes | alanine | http://purl.org/sig/ont/fma/fma82749 |
| T37 | 511-516 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T38 | 566-571 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T39 | 622-627 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T40 | 646-651 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T17 | 511-516 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T18 | 566-571 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T19 | 646-651 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T104 | 191-202 | Disease | denotes | lymphopenia | http://purl.obolibrary.org/obo/MONDO_0003783 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T63 | 145-150 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T64 | 227-232 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T65 | 303-308 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T66 | 511-516 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T67 | 566-571 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T68 | 622-627 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T69 | 646-651 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T18 | 52-62 | Chemical | denotes | antibiotic | http://purl.obolibrary.org/obo/CHEBI_33281 |
| T19 | 95-104 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
| T20 | 372-379 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T21 | 423-430 | Chemical | denotes | alanine | http://purl.obolibrary.org/obo/CHEBI_16449 |
| T22 | 458-467 | Chemical | denotes | aspartate | http://purl.obolibrary.org/obo/CHEBI_132943|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_72314 |
| T25 | 486-489 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T39 | 191-202 | Phenotype | denotes | lymphopenia | http://purl.obolibrary.org/obo/HP_0001888 |
| T40 | 265-277 | Phenotype | denotes | neutrophilia | http://purl.obolibrary.org/obo/HP_0011897 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T107 | 0-123 | Sentence | denotes | All the 5 reactivated patients were given empirical antibiotic treatment and were administered antiviral therapy (Table 1). |
| T108 | 124-316 | Sentence | denotes | Data from laboratory tests showed that one patient had progressive lymphopenia (from 1.3 to 0.56 × 109 cells per L) and progressive elevated neutrophilia (from 4.5 to 18.28 × 109 cells per L). |
| T109 | 317-392 | Sentence | denotes | Two patients had elevated concentrations of C-reactive protein (> 18 mg/L). |
| T110 | 393-491 | Sentence | denotes | All the 5 patients had normal alanine aminotransferase (ALT) and aspartate aminotransferase (AST). |
| T111 | 492-525 | Sentence | denotes | All 5 patients had chest CT scan. |
| T112 | 526-638 | Sentence | denotes | All patients showed typical findings of chest CT images-multiple patchy ground-glass shadows in lungs (Fig. 1 ). |
| T113 | 639-679 | Sentence | denotes | Fig. 1 Chest CT scans of the 5 patients. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 249 | 670-678 | Species | denotes | patients | Tax:9606 |
| 262 | 361-379 | Gene | denotes | C-reactive protein | Gene:1401 |
| 263 | 423-447 | Gene | denotes | alanine aminotransferase | Gene:2875 |
| 264 | 458-484 | Gene | denotes | aspartate aminotransferase | Gene:26503 |
| 265 | 486-489 | Gene | denotes | AST | Gene:26503 |
| 266 | 22-30 | Species | denotes | patients | Tax:9606 |
| 267 | 167-174 | Species | denotes | patient | Tax:9606 |
| 268 | 321-329 | Species | denotes | patients | Tax:9606 |
| 269 | 403-411 | Species | denotes | patients | Tax:9606 |
| 270 | 498-506 | Species | denotes | patients | Tax:9606 |
| 271 | 530-538 | Species | denotes | patients | Tax:9606 |
| 272 | 191-202 | Disease | denotes | lymphopenia | MESH:D008231 |
| 273 | 265-277 | Disease | denotes | neutrophilia | MESH:C563010 |