> top > docs > PMC:7100515 > spans > 4135-5155 > annotations

PMC:7100515 / 4135-5155 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T17 38-45 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T18 275-282 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T19 286-291 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T20 327-332 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T21 396-404 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T22 439-446 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T23 447-455 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T24 542-550 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T25 588-596 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T26 622-629 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T27 749-756 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T28 757-765 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T29 838-841 Body_part denotes Gag http://purl.org/sig/ont/fma/fma63011
T30 870-877 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T31 904-911 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T43 25-33 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T44 150-153 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075
T46 486-490 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T47 534-538 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T48 796-800 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T45 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T46 51-52 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T47 65-67 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T48 95-97 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T49 95-97 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T50 99-107 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T51 196-203 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T52 251-252 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T53 286-291 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T54 322-326 http://purl.obolibrary.org/obo/CLO_0050894 denotes 293T
T55 322-326 http://purl.obolibrary.org/obo/CLO_0051650 denotes 293T
T56 322-326 http://purl.obolibrary.org/obo/CLO_0052052 denotes 293T
T57 327-332 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T58 364-365 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T59 366-371 http://purl.obolibrary.org/obo/CLO_0007836 denotes Mouse
T60 419-423 http://purl.obolibrary.org/obo/NCBITaxon_9925 denotes goat
T61 491-493 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T62 512-517 http://purl.obolibrary.org/obo/CLO_0007836 denotes Mouse
T63 539-541 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T64 554-559 http://purl.obolibrary.org/obo/CLO_0007836 denotes Mouse
T65 585-587 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T66 585-587 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T67 681-682 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T68 729-733 http://purl.obolibrary.org/obo/NCBITaxon_9925 denotes goat
T69 801-803 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T70 1001-1002 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T32 38-45 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T33 95-97 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T34 124-126 Chemical denotes TM http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861
T36 196-203 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T37 275-282 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T38 393-395 Chemical denotes M2 http://purl.obolibrary.org/obo/CHEBI_34827|http://purl.obolibrary.org/obo/CHEBI_51112
T40 439-446 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T41 585-587 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T42 622-629 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T43 712-714 Chemical denotes M2 http://purl.obolibrary.org/obo/CHEBI_34827|http://purl.obolibrary.org/obo/CHEBI_51112
T45 749-756 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T46 870-877 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T47 904-911 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T6 99-114 http://purl.obolibrary.org/obo/GO_0061025 denotes membrane fusion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T31 0-64 Sentence denotes a Diagram of full-length SARS-CoV-2 S protein with a 3xFLAG tag.
T32 65-315 Sentence denotes S1, receptor-binding subunit; S2, membrane fusion subunit; TM, transmembrane domain; NTD, N-terminal domain; pFP, potential fusion peptide; HR-N, heptad repeat-N; HR-C, heptad repeat-C; b–f Detection of CoVs S protein in cells lysate by western blot.
T33 316-926 Sentence denotes Mock, 293T cells transfected with empty vector. b Mouse monoclonal anti-FLAG M2 antibody; c Polyclonal goat anti-MHV-A59 S protein antibody AO4. d Polyclonal rabbit anti-SARS S1 antibodies T62. e Mouse monoclonal anti-SARS S1 antibody. f Mouse monoclonal anti-MERS-CoV S2 antibody. g–j Detection of CoVs S protein in pseudovirions by western blot.Gag-p24 served as a loading control. g Anti-FLAG M2. h Polyclonal goat anti-MHV-A59 S protein antibody AO4. i Polyclonal rabbit anti-SARS S1 antibodies T62. j Polyclonal anti-Gag-p24 antibodies. uncleaved S protein, about 180 kDa; cleaved S protein, about 90 kDa.
T34 927-972 Sentence denotes Experiments were done twice and one is shown.
T35 973-1020 Sentence denotes Source data are provided as a Source Data file.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
152 667-670 Gene denotes p24 Gene:140767
153 838-841 Gene denotes Gag Gene:155030
154 842-845 Gene denotes p24 Gene:140767
155 36-37 Gene denotes S Gene:43740568
156 663-666 Gene denotes Gag Gene:155030
157 25-35 Species denotes SARS-CoV-2 Tax:2697049
158 268-272 Species denotes CoVs Tax:11118
159 615-619 Species denotes CoVs Tax:11118
160 366-371 Species denotes Mouse Tax:10090
161 429-432 Species denotes MHV Tax:11138
162 512-517 Species denotes Mouse Tax:10090
163 554-559 Species denotes Mouse Tax:10090
164 576-584 Species denotes MERS-CoV Tax:1335626
165 739-742 Species denotes MHV Tax:11138
166 205-209 Disease denotes HR-N MESH:D001919
167 322-326 CellLine denotes 293T CVCL:0063