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PMC:7100515 / 11218-12701 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T99 103-107 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T100 115-120 Body_part denotes Cells http://purl.org/sig/ont/fma/fma68646
T101 378-388 Body_part denotes fibroblast http://purl.org/sig/ont/fma/fma63877
T102 404-409 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T103 473-478 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T104 544-549 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T105 771-779 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T106 806-811 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T107 861-869 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T108 955-963 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T109 965-970 Body_part denotes Cells http://purl.org/sig/ont/fma/fma68646
T110 1247-1252 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T111 1254-1259 Body_part denotes Cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T103 22-30 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T104 63-71 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T105 171-179 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T106 191-199 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T107 340-342 Disease denotes RS http://purl.obolibrary.org/obo/MONDO_0010725
T108 508-516 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T109 743-751 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T110 758-766 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T111 835-843 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T112 848-856 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T113 1072-1080 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T114 1122-1130 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T115 1134-1142 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T197 49-50 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T198 52-53 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T199 103-113 http://purl.obolibrary.org/obo/CLO_0000031 denotes cell lines
T200 115-120 http://purl.obolibrary.org/obo/GO_0005623 denotes Cells
T201 126-131 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T202 136-142 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T203 244-246 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T204 328-338 http://purl.obolibrary.org/obo/CLO_0001658 denotes activities
T205 340-342 http://purl.obolibrary.org/obo/CLO_0008882 denotes RS
T206 364-367 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T207 378-388 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblast
T208 404-409 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T209 458-461 http://purl.obolibrary.org/obo/CLO_0001230 denotes 293
T210 458-461 http://purl.obolibrary.org/obo/CLO_0037237 denotes 293
T211 458-461 http://purl.obolibrary.org/obo/CLO_0050903 denotes 293
T212 458-461 http://purl.obolibrary.org/obo/CLO_0054249 denotes 293
T213 458-461 http://purl.obolibrary.org/obo/CLO_0054250 denotes 293
T214 458-461 http://purl.obolibrary.org/obo/CLO_0054251 denotes 293
T215 458-461 http://purl.obolibrary.org/obo/CLO_0054252 denotes 293
T216 469-472 http://purl.obolibrary.org/obo/CLO_0001230 denotes 293
T217 469-472 http://purl.obolibrary.org/obo/CLO_0037237 denotes 293
T218 469-472 http://purl.obolibrary.org/obo/CLO_0050903 denotes 293
T219 469-472 http://purl.obolibrary.org/obo/CLO_0054249 denotes 293
T220 469-472 http://purl.obolibrary.org/obo/CLO_0054250 denotes 293
T221 469-472 http://purl.obolibrary.org/obo/CLO_0054251 denotes 293
T222 469-472 http://purl.obolibrary.org/obo/CLO_0054252 denotes 293
T223 473-478 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T224 527-531 http://purl.obolibrary.org/obo/CLO_0003684 denotes HeLa
T225 527-531 http://purl.obolibrary.org/obo/CLO_0050910 denotes HeLa
T226 539-549 http://purl.obolibrary.org/obo/CLO_0054283 denotes HeLa cells
T227 539-549 http://purl.obolibrary.org/obo/CLO_0054285 denotes HeLa cells
T228 539-549 http://purl.obolibrary.org/obo/CLO_0054286 denotes HeLa cells
T229 539-549 http://purl.obolibrary.org/obo/CLO_0054287 denotes HeLa cells
T230 539-549 http://purl.obolibrary.org/obo/CLO_0054288 denotes HeLa cells
T231 539-549 http://purl.obolibrary.org/obo/CLO_0054289 denotes HeLa cells
T232 539-543 http://purl.obolibrary.org/obo/CLO_0003684 denotes HeLa
T233 539-543 http://purl.obolibrary.org/obo/CLO_0050910 denotes HeLa
T234 806-811 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T235 939-943 http://purl.obolibrary.org/obo/NCBITaxon_9925 denotes goat
T236 965-970 http://purl.obolibrary.org/obo/GO_0005623 denotes Cells
T237 1237-1240 http://purl.obolibrary.org/obo/CLO_0001230 denotes 293
T238 1237-1240 http://purl.obolibrary.org/obo/CLO_0037237 denotes 293
T239 1237-1240 http://purl.obolibrary.org/obo/CLO_0050903 denotes 293
T240 1237-1240 http://purl.obolibrary.org/obo/CLO_0054249 denotes 293
T241 1237-1240 http://purl.obolibrary.org/obo/CLO_0054250 denotes 293
T242 1237-1240 http://purl.obolibrary.org/obo/CLO_0054251 denotes 293
T243 1237-1240 http://purl.obolibrary.org/obo/CLO_0054252 denotes 293
T244 1247-1252 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T245 1254-1259 http://purl.obolibrary.org/obo/GO_0005623 denotes Cells
T246 1464-1465 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T104 340-342 Chemical denotes RS http://purl.obolibrary.org/obo/CHEBI_73819
T105 771-779 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T106 861-869 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T107 1215-1222 Chemical denotes mixture http://purl.obolibrary.org/obo/CHEBI_60004

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T11 267-279 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T12 1298-1310 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T77 49-114 Sentence denotes a, b Entry of SARS-CoV-2 S pseudovirions on indicated cell lines.
T78 115-240 Sentence denotes Cells from human and animal origin were inoculated with SARS-CoV-2 S (red), SARS-CoV S (blue), or VSV-G (gray) pseudovirions.
T79 241-339 Sentence denotes At 48 h post inoculation, transduction efficiency was measured according to luciferase activities.
T80 340-597 Sentence denotes RS, Rhinolophus sinicus bat embryonic fibroblast; BHK/hAPN, BHK cells stably expressing hAPN, the hCoV-229E receptor; 293/hACE2, 293 cells stably expressing hACE2, the SARS-CoV receptor; HeLa/hDPP4, HeLa cells stably expressing hDPP4, the MERS-CoV receptor.
T81 598-669 Sentence denotes Experiments were done in triplicates and repeated at least three times.
T82 670-797 Sentence denotes One representative is shown with error bars indicating SEM. c Binding of SARS-CoV S and SARS-CoV-2 S proteins to soluble hACE2.
T83 798-964 Sentence denotes HEK293T cells transiently expressing SARS-CoV and SARS-CoV-2 S proteins were incubated with the soluble hACE2 on ice, followed by polyclonal goat anti-hACE2 antibody.
T84 965-1003 Sentence denotes Cells were analyzed by flow cytometry.
T85 1004-1121 Sentence denotes The experiments were repeated at least three times. d Inhibition of SARS-CoV-2 S pseudovirion entry by soluble hACE2.
T86 1122-1253 Sentence denotes SARS-CoV S, SARS-CoV-2 S, or VSV-G pseudovirions were pre-incubated with soluble hACE2, then mixture were added to 293/hACE2 cells.
T87 1254-1324 Sentence denotes Cells were lysed 40 h later and pseudoviral transduction was measured.
T88 1325-1385 Sentence denotes Experiments were done twice and one representative is shown.
T89 1386-1435 Sentence denotes Error bars indicate SEM of technical triplicates.
T90 1436-1483 Sentence denotes Source data are provided as a Source Data file.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
332 33-34 Gene denotes S Gene:43740568
333 22-32 Species denotes SARS-CoV-2 Tax:2697049
370 394-398 Gene denotes hAPN Gene:290
371 428-432 Gene denotes hAPN Gene:290
372 462-467 Gene denotes hACE2 Gene:59272
373 497-502 Gene denotes hACE2 Gene:59272
374 532-537 Gene denotes hDPP4 Gene:1803
375 568-573 Gene denotes hDPP4 Gene:1803
376 791-796 Gene denotes hACE2 Gene:59272
377 902-907 Gene denotes hACE2 Gene:59272
378 949-954 Gene denotes hACE2 Gene:59272
379 1115-1120 Gene denotes hACE2 Gene:59272
380 1203-1208 Gene denotes hACE2 Gene:59272
381 1241-1246 Gene denotes hACE2 Gene:59272
382 1145-1146 Gene denotes S Gene:43740568
383 1083-1084 Gene denotes S Gene:43740568
384 859-860 Gene denotes S Gene:43740568
385 769-770 Gene denotes S Gene:43740568
386 182-183 Gene denotes S Gene:43740568
387 74-75 Gene denotes S Gene:43740568
388 63-73 Species denotes SARS-CoV-2 Tax:2697049
389 126-131 Species denotes human Tax:9606
390 171-181 Species denotes SARS-CoV-2 Tax:2697049
391 191-199 Species denotes SARS-CoV Tax:694009
392 344-363 Species denotes Rhinolophus sinicus Tax:89399
393 508-516 Species denotes SARS-CoV Tax:694009
394 579-587 Species denotes MERS-CoV Tax:1335626
395 743-751 Species denotes SARS-CoV Tax:694009
396 758-768 Species denotes SARS-CoV-2 Tax:2697049
397 835-843 Species denotes SARS-CoV Tax:694009
398 848-858 Species denotes SARS-CoV-2 Tax:2697049
399 1072-1082 Species denotes SARS-CoV-2 Tax:2697049
400 1122-1130 Species denotes SARS-CoV Tax:694009
401 1134-1144 Species denotes SARS-CoV-2 Tax:2697049
402 469-478 CellLine denotes 293 cells CVCL:0045
403 527-531 CellLine denotes HeLa CVCL:0030
404 539-543 CellLine denotes HeLa CVCL:0030
405 798-805 CellLine denotes HEK293T CVCL:0063