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PMC:7096777 / 697-9955 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
30 228-245 Species denotes novel coronavirus Tax:2697049
31 265-312 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
32 314-324 Species denotes SARS-CoV-2 Tax:2697049
33 796-804 Species denotes patients Tax:9606
34 34-43 Disease denotes pneumonia MESH:D011014
35 365-385 Disease denotes SARS-CoV-2 infection MESH:C000657245
36 401-420 Disease denotes coronavirus disease MESH:D018352
37 422-430 Disease denotes COVID-19 MESH:C000657245
38 485-493 Disease denotes COVID-19 MESH:C000657245
39 522-549 Disease denotes respiratory tract infection MESH:D012141
40 566-575 Disease denotes pneumonia MESH:D011014
41 625-633 Disease denotes COVID-19 MESH:C000657245
42 783-792 Disease denotes mortality MESH:D003643
43 825-833 Disease denotes COVID-19 MESH:C000657245
44 915-923 Disease denotes COVID-19 MESH:C000657245
45 1104-1112 Disease denotes COVID-19 MESH:C000657245
47 1203-1211 Disease denotes COVID-19 MESH:C000657245
56 1794-1801 Species denotes persons Tax:9606
57 1270-1278 Disease denotes COVID-19 MESH:C000657245
58 1340-1348 Disease denotes COVID-19 MESH:C000657245
59 1514-1522 Disease denotes COVID-19 MESH:C000657245
60 1642-1650 Disease denotes COVID-19 MESH:C000657245
61 1872-1880 Disease denotes COVID-19 MESH:C000657245
62 2045-2051 Disease denotes deaths MESH:D003643
63 2099-2105 Disease denotes deaths MESH:D003643
65 2185-2193 Disease denotes COVID-19 MESH:C000657245
71 2279-2287 Disease denotes COVID-19 MESH:C000657245
72 2543-2551 Disease denotes COVID-19 MESH:C000657245
73 2650-2658 Disease denotes COVID-19 MESH:C000657245
74 2725-2733 Disease denotes COVID-19 MESH:C000657245
75 2788-2796 Disease denotes COVID-19 MESH:C000657245
77 3060-3068 Disease denotes COVID-19 MESH:C000657245
82 3159-3167 Disease denotes COVID-19 MESH:C000657245
83 3330-3338 Disease denotes COVID-19 MESH:C000657245
84 3650-3658 Disease denotes COVID-19 MESH:C000657245
85 3725-3733 Disease denotes COVID-19 MESH:C000657245
87 4101-4109 Disease denotes COVID-19 MESH:C000657245
89 4375-4394 Disease denotes coronavirus disease MESH:D018352
91 4510-4518 Disease denotes COVID-19 MESH:C000657245
93 4649-4657 Disease denotes COVID-19 MESH:C000657245
95 4973-4981 Disease denotes COVID-19 MESH:C000657245
97 5142-5150 Disease denotes COVID-19 MESH:C000657245
99 5355-5374 Disease denotes coronavirus disease MESH:D018352
105 6158-6166 Species denotes patients Tax:9606
106 5809-5812 Chemical denotes EEA
107 5768-5776 Disease denotes COVID-19 MESH:C000657245
108 5876-5884 Disease denotes COVID-19 MESH:C000657245
109 6207-6215 Disease denotes COVID-19 MESH:C000657245
117 6345-6353 Species denotes patients Tax:9606
118 6641-6644 Chemical denotes EEA
119 6359-6367 Disease denotes COVID-19 MESH:C000657245
120 6552-6560 Disease denotes COVID-19 MESH:C000657245
121 6868-6874 Disease denotes deaths MESH:D003643
122 7388-7396 Disease denotes COVID-19 MESH:C000657245
123 7544-7552 Disease denotes COVID-19 MESH:C000657245
131 8175-8185 Species denotes SARS-CoV-2 Tax:2697049
132 8219-8227 Species denotes patients Tax:9606
133 8497-8507 Species denotes SARS-COV-2 Tax:2697049
134 9035-9045 Species denotes SARS-CoV-2 Tax:2697049
135 9189-9197 Species denotes patients Tax:9606
136 7977-7985 Disease denotes COVID-19 MESH:C000657245
137 8233-8241 Disease denotes COVID-19 MESH:C000657245

MyTest

Id Subject Object Predicate Lexical cue
32186277-32070465-29324350 1423-1424 32070465 denotes 2
32186277-32156327-29324351 1695-1696 32156327 denotes 4
32186277-32070465-29324352 1847-1848 32070465 denotes 2
32186277-22777516-29324353 7083-7085 22777516 denotes 14

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T116 5142-5150 SP_7 denotes COVID-19
T114 4101-4109 SP_7 denotes COVID-19
T112 5768-5776 SP_7 denotes COVID-19
T111 5876-5884 SP_7 denotes COVID-19
T110 6207-6215 SP_7 denotes COVID-19
T109 6359-6367 SP_7 denotes COVID-19
T108 6442-6462 CL:0002211 denotes intensive care units
T107 6552-6560 SP_7 denotes COVID-19
T106 6868-6874 GO:0016265 denotes deaths
T105 7388-7396 SP_7 denotes COVID-19
T104 7544-7552 SP_7 denotes COVID-19
T103 7977-7985 SP_7 denotes COVID-19
T102 8175-8185 SP_7 denotes SARS-CoV-2
T101 8233-8241 SP_7 denotes COVID-19
T100 8497-8507 SP_7 denotes SARS-COV-2
T99 8992-8999 GO:0065007 denotes control
T98 9035-9045 SP_7 denotes SARS-CoV-2
T78 3159-3167 SP_7 denotes COVID-19
T77 3330-3338 SP_7 denotes COVID-19
T76 3650-3658 SP_7 denotes COVID-19
T75 3725-3733 SP_7 denotes COVID-19
T70 2279-2287 SP_7 denotes COVID-19
T69 2543-2551 SP_7 denotes COVID-19
T68 2650-2658 SP_7 denotes COVID-19
T67 2725-2733 SP_7 denotes COVID-19
T66 2788-2796 SP_7 denotes COVID-19
T60 1270-1278 SP_7 denotes COVID-19
T59 1340-1348 SP_7 denotes COVID-19
T58 1514-1522 SP_7 denotes COVID-19
T57 1642-1650 SP_7 denotes COVID-19
T56 1794-1801 NCBITaxon:9606 denotes persons
T55 1872-1880 SP_7 denotes COVID-19
T54 2045-2051 GO:0016265 denotes deaths
T53 2099-2105 GO:0016265 denotes deaths
T44 234-245 NCBITaxon:11118 denotes coronavirus
T43 265-277 SP_7 denotes severe acute
T42 278-289 SP_7;UBERON:0001004 denotes respiratory
T41 290-312 SP_7 denotes syndrome coronavirus 2
T40 314-324 SP_7 denotes SARS-CoV-2
T39 365-375 SP_7 denotes SARS-CoV-2
T38 401-412 NCBITaxon:11118 denotes coronavirus
T37 422-430 SP_7 denotes COVID-19
T36 468-479 NCBITaxon:1 denotes individuals
T35 485-493 SP_7 denotes COVID-19
T34 522-539 UBERON:0000065 denotes respiratory tract
T32 825-833 SP_7 denotes COVID-19
T31 915-923 SP_7 denotes COVID-19
T30 1104-1112 SP_7 denotes COVID-19
T33 625-633 SP_7 denotes COVID-19

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 522-539 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T2 9173-9177 Body_part denotes face http://purl.org/sig/ont/fma/fma24728

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 522-539 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T2 9173-9177 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T5 34-43 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T6 265-312 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T7 265-298 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T8 314-322 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T9 365-373 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T10 376-385 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T11 422-430 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T12 485-493 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 522-549 Disease denotes respiratory tract infection http://purl.obolibrary.org/obo/MONDO_0024355
T14 540-549 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T15 566-575 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T16 625-633 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T17 825-833 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T18 915-923 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T19 1104-1112 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 1203-1211 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T21 1270-1278 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T22 1340-1348 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T23 1514-1522 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T24 1642-1650 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T25 1872-1880 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T26 2185-2193 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T27 2279-2287 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T28 2543-2551 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T29 2650-2658 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T30 2725-2733 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T31 2788-2796 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T32 3060-3068 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T33 3159-3167 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T34 3330-3338 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T35 3650-3658 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T36 3725-3733 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T37 4101-4109 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T38 4365-4373 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T39 4510-4518 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T40 4649-4657 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T41 4973-4981 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T42 5142-5150 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T43 5345-5353 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T44 5768-5776 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T45 5876-5884 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T46 6207-6215 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T47 6359-6367 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T48 6552-6560 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T49 7388-7396 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T50 7544-7552 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T51 7977-7985 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T52 8175-8183 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T53 8233-8241 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T54 8497-8501 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T55 9035-9043 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T3 21-22 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 226-227 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 386-389 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T6 499-500 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 520-521 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 648-649 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 840-845 http://purl.obolibrary.org/obo/CLO_0053794 denotes 4% [1
T10 1430-1432 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T11 1486-1498 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T12 1523-1524 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 2614-2615 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 2643-2649 http://purl.obolibrary.org/obo/CLO_0001658 denotes active
T15 3945-3946 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 4115-4116 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T17 4221-4222 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T18 4463-4464 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T19 4602-4603 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T20 4774-4777 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T21 4778-4779 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T22 5015-5016 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T23 5034-5035 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T24 5929-5930 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T25 6180-6186 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T26 6236-6243 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T27 6314-6315 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T28 6524-6528 http://purl.obolibrary.org/obo/CLO_0001001 denotes 8=13
T29 6570-6571 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T30 6746-6747 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T31 6812-6817 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T32 6876-6877 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T33 6902-6904 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T34 6912-6913 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T35 7236-7238 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T36 7419-7420 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 7696-7697 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T38 8125-8126 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T39 8415-8416 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T40 8514-8515 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T41 8527-8528 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T42 8544-8545 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T43 8892-8893 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T44 9173-9177 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T45 9178-9179 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T5 0-116 Sentence denotes On 31 December 2019, a cluster of pneumonia cases of unknown aetiology was reported in Wuhan, Hubei Province, China.
T6 117-330 Sentence denotes On 9 January 2020, the China Center for Disease Control and Prevention reported the causative agent as being a novel coronavirus now referred to as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) [1].
T7 331-432 Sentence denotes Since, the illness resulting from SARS-CoV-2 infection has been named coronavirus disease (COVID-19).
T8 433-607 Sentence denotes Evidence to date is that ca 80% of individuals with COVID-19 have a mild disease, i.e. a respiratory tract infection with or without pneumonia, and most of these recover [1].
T9 608-778 Sentence denotes In ca 14% cases, COVID-19 develops into a more severe disease requiring hospitalisation while the remaining 6% cases experience critical illness requiring intensive care.
T10 779-847 Sentence denotes The mortality of patients hospitalised due to COVID-19 is ca 4% [1].
T11 848-1065 Sentence denotes In this study, we assess the trends in the cumulative incidence of COVID-19 in each European Union/European Economic Area (EU/EEA) country and the United Kingdom (UK) and compare them to that of Hubei Province, China.
T12 1066-1201 Sentence denotes We also compare the current number of COVID-19 cases in EU/EEA countries and the UK with that in Italy during 31 January–15 March 2020.
T13 1203-1248 Sentence denotes COVID-19 cases in EU/EEA countries and the UK
T14 1249-1426 Sentence denotes Subsequent to China, COVID-19 underwent further geographical spread and the dynamic of the COVID-19 pandemic in the rest of the world currently follows that of this country [2].
T15 1427-1538 Sentence denotes On 11 March 2020, the Director General of the World Health Organization (WHO) declared COVID-19 a pandemic [3].
T16 1539-1700 Sentence denotes In the 5 March issue of Eurosurveillance 2020, Spiteri et al. reported on the first European confirmed COVID-19 cases according to the WHO case definition [4,5].
T17 1701-1850 Sentence denotes In the EU/EEA, the first three confirmed cases were reported by France on 24 January 2020 in persons returning from Wuhan, Hubei Province, China [2].
T18 1851-2127 Sentence denotes As at 15 March 2020, COVID-19 cases had been detected in all 30 EU/EEA countries and the United Kingdom (UK) [6], whereby between 31 December 2019 and that date included, 39,768 cases and 1,727 deaths had been reported, with 17,750 cases and 1,441 deaths from Italy alone [6].
T19 2129-2199 Sentence denotes Obtaining cumulative number and cumulative incidence of COVID-19 cases
T20 2200-2493 Sentence denotes At the European Centre for Disease Prevention and Control (ECDC), the notified COVID-19 case counts in each country worldwide, obtained from only official sources such as the countries’ Ministry of Health, national and regional health authorities and the WHO, are updated each day at 8:00 a.m.
T21 2494-2610 Sentence denotes These data were used for assessing the trends of COVID-19 in EU/EEA and the UK, and comparing them to that in Italy.
T22 2611-2875 Sentence denotes As a proxy of the prevalence of active COVID-19 cases, we calculated the 14-day truncated cumulative incidence of COVID-19 cases, thus taking into account the natural course of COVID-19, in each EU/EEA country and the UK, during the 1 January–15 March 2020 period.
T23 2876-3048 Sentence denotes We also presented the cumulative number of notified cases of each country as at 15 March 2020 8:00 a.m. compared with that of Italy for the 31 January–15 March 2020 period.
T24 3050-3099 Sentence denotes Trends of COVID-19 in EU/EEA countries and the UK
T25 3100-3266 Sentence denotes The trends in the 14-day truncated cumulative incidence of COVID-19 cases in EU/EEA countries and the UK generally followed that of Hubei Province (China) (Figure 1).
T26 3267-3454 Sentence denotes For the EU/EEA and the UK overall, the cumulative incidence of COVID-19 started to increase around 21 February and then increased sharply around 28 February 2020 (Supplementary material).
T27 3455-3684 Sentence denotes This was mostly driven by the rapid increase in the number of reported cases from Italy, but all other EU/EEA countries and the UK showed similar increasing trends of the cumulative incidence of COVID-19 (Supplementary material).
T28 3685-3840 Sentence denotes Figure 2 shows the cumulative number of COVID-19 cases, in EU/EEA countries and the UK compared with that in Italy for the 31 January–15 March 2020 period.
T29 3841-4024 Sentence denotes It highlights that, as at 15 March 8:00 a.m., 15 other EU/EEA countries and the UK had already reported a total number of cases comparable to that of Italy just 3 weeks prior or less.
T30 4025-4364 Sentence denotes Figure 1 Time distribution of the 14-day truncated cumulative incidence of COVID-19 for (A) 14-day truncated cumulative incidence ≥ 4.0 cases per 100,000 population and > 30 notified casesa and (B) 14-day truncated cumulative incidence < 4.0 cases per 100,000 population or < 30 notified casesb, EU/EEA countriesand the UKc, 15 March 2020
T31 4365-4403 Sentence denotes COVID-19: coronavirus disease; EU/EEA:
T32 4404-4446 Sentence denotes European Union/European Economic Area; UK:
T33 4447-4462 Sentence denotes United Kingdom.
T34 4463-4601 Sentence denotes a The 14-day truncated cumulative incidence of COVID-19 cases distribution in each country is compared with that of Hubei Province, China.
T35 4602-4925 Sentence denotes b The 14-day truncated cumulative incidence of COVID-19 cases distribution in each country is compared with that of Italy (which, unlike the other countries in this panel, has a 14-day truncated cumulative incidence of ≥ 4.0 cases per 100,000 population and > 30 notified cases as at 15 March) and of Hubei Province, China.
T36 4926-5110 Sentence denotes c The 14-day truncated cumulative incidence of COVID-19 cases is shown from the day (D1) a country reported a 14-day truncated cumulative incidence > 0.05 cases per 100,000 population.
T37 5111-5344 Sentence denotes Figure 2 Cumulative number of COVID-19 cases in EU/EEA countries and the UK as at 15 March compared with that in Italy, 31 January–15 March 2020 (total number of cases in the EU/EEA and the UK as at 15 March 2020 8:00 a.m. = 39,768)
T38 5345-5383 Sentence denotes COVID-19: coronavirus disease; EU/EEA:
T39 5384-5426 Sentence denotes European Union/European Economic Area; UK:
T40 5427-5442 Sentence denotes United Kingdom.
T41 5443-5617 Sentence denotes The crimson red bar indicates the position of Italy as at 15 March, while the red, orange and yellow bars indicate the position of Italy 1, 2 and 3 weeks prior, respectively.
T42 5618-5697 Sentence denotes The number of cases in each country as at 15 March is indicated in parentheses.
T43 5699-5709 Sentence denotes Discussion
T44 5710-5824 Sentence denotes Our results indicate that the number of notified cases of COVID-19 is rapidly increasing in the EU/EEA and the UK.
T45 5825-5965 Sentence denotes The observed trends in the cumulative incidence of COVID-19 suggest that the pandemic is progressing at a comparable speed in all countries.
T46 5966-6244 Sentence denotes This is despite countries being at different stages, variations in national public health responses, and possibly different case definitions in countries and different protocols for selecting patients that must be tested for confirmation of COVID-19, including catch-up testing.
T47 6245-6530 Sentence denotes Early March 2020, doctors in the affected regions of Italy described a situation in which ca 10% of patients with COVID-19 required intensive care [7] and media sources reported that hospitals and intensive care units in these regions had already reached their maximum capacity [8=13].
T48 6531-6707 Sentence denotes Data on admission of COVID-19 cases in a hospital and/or an intensive care unit are currently available at EU/EEA level for only 6% and 1% cases, respectively (data not shown).
T49 6708-6875 Sentence denotes They should, however, be collected in a systematic fashion to complement current surveillance data that focus on the number of reported cases and the number of deaths.
T50 6876-7087 Sentence denotes A study performed in 2010–11 showed a large variation in the availability of intensive care and intermediate care beds in Europe, ranging from 29.2 in Germany to 4.2 beds per 100,000 population in Portugal [14].
T51 7088-7240 Sentence denotes This means that countries may have more or less resources than Italy (12.5 intensive care and intermediate care beds per 100,000 population in 2010–11).
T52 7241-7557 Sentence denotes Modelling scenarios related to healthcare capacity saturation, with estimates for each EU/EEA country and the UK of the prevalence of hospitalised COVID-19 cases associated with a > 90% risk of exceeding intensive care bed capacity, are provided in the sixth update of the ECDC rapid risk assessment on COVID-19 [1].
T53 7558-7894 Sentence denotes Since cases have so far clustered in certain regions in EU/EEA countries and the UK, and hospitals and intensive care units usually serve a defined regional catchment population, information about cases and intensive care beds should preferably be made available at the Nomenclature of territorial units for statistics 2 (NUTS-2) level.
T54 7895-8043 Sentence denotes The experience from Italy and the current trends in other countries show that the COVID-19 pandemic is progressing rapidly in the EU/EEA and the UK.
T55 8044-8357 Sentence denotes Countries, hospitals and intensive care units should thus prepare themselves for a scenario of sustained community transmission of SARS-CoV-2 and an increase in the number of patients with COVID-19 requiring healthcare, and in particular intensive care, such as the one occurring in the affected regions of Italy.
T56 8358-8778 Sentence denotes As pointed out in the recent ECDC rapid risk assessment, a rapid, proactive and comprehensive approach is essential to delay the spread of SARS-COV-2, with a shift from a containment to a mitigation approach, as the anticipated rapid increase in the number of cases may not provide decision makers and hospitals enough time to comprehend, accept and adapt their response accordingly if not implemented ahead of time [1].
T57 8779-8882 Sentence denotes The rapid risk assessment also lists the public health measures to mitigate the impact of the pandemic.
T58 8883-9086 Sentence denotes There is a short window of opportunity during which countries have the possibility to further increase their control efforts to slow down the spread of SARS-CoV-2 and decrease the pressure on healthcare.
T59 9087-9258 Sentence denotes Failing this, it is likely that the healthcare systems of other EU/EEA countries will face a surge of patients that require intensive care within the coming days or weeks.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 34-43 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T2 522-549 Phenotype denotes respiratory tract infection http://purl.obolibrary.org/obo/HP_0011947
T3 566-575 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

2_test

Id Subject Object Predicate Lexical cue
32186277-32070465-29324350 1423-1424 32070465 denotes 2
32186277-32156327-29324351 1695-1696 32156327 denotes 4
32186277-32070465-29324352 1847-1848 32070465 denotes 2
32186277-22777516-29324353 7083-7085 22777516 denotes 14