PMC:7096777 / 697-1898
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
30 | 228-245 | Species | denotes | novel coronavirus | Tax:2697049 |
31 | 265-312 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
32 | 314-324 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
33 | 796-804 | Species | denotes | patients | Tax:9606 |
34 | 34-43 | Disease | denotes | pneumonia | MESH:D011014 |
35 | 365-385 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
36 | 401-420 | Disease | denotes | coronavirus disease | MESH:D018352 |
37 | 422-430 | Disease | denotes | COVID-19 | MESH:C000657245 |
38 | 485-493 | Disease | denotes | COVID-19 | MESH:C000657245 |
39 | 522-549 | Disease | denotes | respiratory tract infection | MESH:D012141 |
40 | 566-575 | Disease | denotes | pneumonia | MESH:D011014 |
41 | 625-633 | Disease | denotes | COVID-19 | MESH:C000657245 |
42 | 783-792 | Disease | denotes | mortality | MESH:D003643 |
43 | 825-833 | Disease | denotes | COVID-19 | MESH:C000657245 |
44 | 915-923 | Disease | denotes | COVID-19 | MESH:C000657245 |
45 | 1104-1112 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T44 | 234-245 | NCBITaxon:11118 | denotes | coronavirus |
T43 | 265-277 | SP_7 | denotes | severe acute |
T42 | 278-289 | SP_7;UBERON:0001004 | denotes | respiratory |
T41 | 290-312 | SP_7 | denotes | syndrome coronavirus 2 |
T40 | 314-324 | SP_7 | denotes | SARS-CoV-2 |
T39 | 365-375 | SP_7 | denotes | SARS-CoV-2 |
T38 | 401-412 | NCBITaxon:11118 | denotes | coronavirus |
T37 | 422-430 | SP_7 | denotes | COVID-19 |
T36 | 468-479 | NCBITaxon:1 | denotes | individuals |
T35 | 485-493 | SP_7 | denotes | COVID-19 |
T34 | 522-539 | UBERON:0000065 | denotes | respiratory tract |
T32 | 825-833 | SP_7 | denotes | COVID-19 |
T31 | 915-923 | SP_7 | denotes | COVID-19 |
T30 | 1104-1112 | SP_7 | denotes | COVID-19 |
T33 | 625-633 | SP_7 | denotes | COVID-19 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T1 | 522-539 | Body_part | denotes | respiratory tract | http://purl.org/sig/ont/fma/fma265130 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 522-539 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T5 | 34-43 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T6 | 265-312 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T7 | 265-298 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
T8 | 314-322 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T9 | 365-373 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T10 | 376-385 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T11 | 422-430 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T12 | 485-493 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T13 | 522-549 | Disease | denotes | respiratory tract infection | http://purl.obolibrary.org/obo/MONDO_0024355 |
T14 | 540-549 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T15 | 566-575 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T16 | 625-633 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T17 | 825-833 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T18 | 915-923 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T19 | 1104-1112 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3 | 21-22 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T4 | 226-227 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T5 | 386-389 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T6 | 499-500 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T7 | 520-521 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T8 | 648-649 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T9 | 840-845 | http://purl.obolibrary.org/obo/CLO_0053794 | denotes | 4% [1 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5 | 0-116 | Sentence | denotes | On 31 December 2019, a cluster of pneumonia cases of unknown aetiology was reported in Wuhan, Hubei Province, China. |
T6 | 117-330 | Sentence | denotes | On 9 January 2020, the China Center for Disease Control and Prevention reported the causative agent as being a novel coronavirus now referred to as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) [1]. |
T7 | 331-432 | Sentence | denotes | Since, the illness resulting from SARS-CoV-2 infection has been named coronavirus disease (COVID-19). |
T8 | 433-607 | Sentence | denotes | Evidence to date is that ca 80% of individuals with COVID-19 have a mild disease, i.e. a respiratory tract infection with or without pneumonia, and most of these recover [1]. |
T9 | 608-778 | Sentence | denotes | In ca 14% cases, COVID-19 develops into a more severe disease requiring hospitalisation while the remaining 6% cases experience critical illness requiring intensive care. |
T10 | 779-847 | Sentence | denotes | The mortality of patients hospitalised due to COVID-19 is ca 4% [1]. |
T11 | 848-1065 | Sentence | denotes | In this study, we assess the trends in the cumulative incidence of COVID-19 in each European Union/European Economic Area (EU/EEA) country and the United Kingdom (UK) and compare them to that of Hubei Province, China. |
T12 | 1066-1201 | Sentence | denotes | We also compare the current number of COVID-19 cases in EU/EEA countries and the UK with that in Italy during 31 January–15 March 2020. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 34-43 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T2 | 522-549 | Phenotype | denotes | respiratory tract infection | http://purl.obolibrary.org/obo/HP_0011947 |
T3 | 566-575 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |