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PMC:7096775 / 8612-10004 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T3 1281-1290 Body_part denotes Grey line http://purl.org/sig/ont/fma/fma74591

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T66 144-153 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T67 547-555 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T68 859-894 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T69 865-894 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T70 896-900 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T71 908-916 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T72 971-975 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T73 1004-1008 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T74 1032-1036 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T75 1189-1197 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T76 1250-1258 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T77 1321-1330 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T78 1365-1373 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T59 64-65 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T60 167-168 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 338-340 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T62 844-845 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T63 1388-1390 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T74 0-11 Sentence denotes Ventilation
T75 12-136 Sentence denotes Three case series from the province Hubei described a high rate of cases who needed ventilation (20%, 23% and 25%) [5,6,10].
T76 137-216 Sentence denotes German pneumonia patients had a two- to threefold lower ventilation rate of 9%.
T77 217-367 Sentence denotes The two case series from Shenzhen and the province Zhejiang also reported much lower ventilation rates of, respectively, 11% and 2% [9,11] (Figure 2).
T78 368-435 Sentence denotes The median duration of ventilation was 9 days (interquartile range:
T79 436-500 Sentence denotes 7–19, n = 13) for non-invasive and 17 days (interquartile range:
T80 501-597 Sentence denotes 12–19, n = 4) for invasive ventilation in the COVID-19 case series described by Chen et al. [5].
T81 598-715 Sentence denotes In contrast, the median ventilation duration (invasive and non-invasive) in SPP was only 2 days (interquartile range:
T82 716-730 Sentence denotes 1–4, n = 303).
T83 731-926 Sentence denotes The high ventilation rates and the long duration of ventilation (data from one case series) can be attributed to a high rate of acute respiratory distress syndrome (ARDS) among COVID-19 patients.
T84 927-1022 Sentence denotes Again, the difference between Hubei (17–20% ARDS) and outside of Hubei (2–4% ARDS) is striking.
T85 1023-1068 Sentence denotes However, ARDS was observed in only 1% of SPP.
T86 1069-1249 Sentence denotes Figure 2 Reported proportions of patients on ventilation and proportions of patients who were still hospitalised, five COVID-19 case series, China, January–February 2020 (n = 734)
T87 1250-1280 Sentence denotes COVID-19: coronavirus disease.
T88 1281-1349 Sentence denotes Grey line: proportion of ventilation in pneumonia sentinel patients.
T89 1350-1392 Sentence denotes Data from five COVID-19 series [5,6,9-11].

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T22 144-153 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T23 865-885 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T24 1321-1330 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

2_test

Id Subject Object Predicate Lexical cue
32186278-32112886-29336356 128-129 32112886 denotes 5
32186278-32075786-29336357 132-134 32075786 denotes 10
32186278-32404696-29336358 350-351 32404696 denotes 9
32186278-32112886-29336359 594-595 32112886 denotes 5
32186278-32112886-29336360 1382-1383 32112886 denotes 5
32186278-32404696-29336361 1386-1387 32404696 denotes 9
32186278-32075786-29336361 1386-1387 32075786 denotes 9

MyTest

Id Subject Object Predicate Lexical cue
32186278-32112886-29336356 128-129 32112886 denotes 5
32186278-32075786-29336357 132-134 32075786 denotes 10
32186278-32404696-29336358 350-351 32404696 denotes 9
32186278-32112886-29336359 594-595 32112886 denotes 5
32186278-32112886-29336360 1382-1383 32112886 denotes 5
32186278-32404696-29336361 1386-1387 32404696 denotes 9
32186278-32075786-29336361 1386-1387 32075786 denotes 9

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
174 154-162 Species denotes patients Tax:9606
175 917-925 Species denotes patients Tax:9606
176 144-153 Disease denotes pneumonia MESH:D011014
177 547-555 Disease denotes COVID-19 MESH:C000657245
178 859-894 Disease denotes acute respiratory distress syndrome MESH:D012128
179 896-900 Disease denotes ARDS MESH:D012128
180 908-916 Disease denotes COVID-19 MESH:C000657245
181 971-975 Disease denotes ARDS MESH:D012128
182 1004-1008 Disease denotes ARDS MESH:D012128
183 1032-1036 Disease denotes ARDS MESH:D012128
187 1103-1111 Species denotes patients Tax:9606
188 1146-1154 Species denotes patients Tax:9606
189 1189-1197 Disease denotes COVID-19 MESH:C000657245
191 1260-1279 Disease denotes coronavirus disease MESH:D018352
195 1340-1348 Species denotes patients Tax:9606
196 1321-1330 Disease denotes pneumonia MESH:D011014
197 1365-1373 Disease denotes COVID-19 MESH:C000657245