PMC:7096775 / 2569-4045
Annnotations
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T20 | 94-102 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T21 | 152-160 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T22 | 161-170 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T23 | 416-425 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T24 | 616-625 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T25 | 718-726 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T26 | 737-772 | Disease | denotes | acute respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T27 | 743-772 | Disease | denotes | respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0009971 |
| T28 | 1282-1291 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 13-14 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T9 | 40-41 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T10 | 283-284 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T11 | 306-307 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T12 | 1136-1137 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T13 | 1159-1164 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | males |
| T14 | 1159-1164 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | males |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 295-300 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T19 | 0-7 | Sentence | denotes | Concept |
| T20 | 8-271 | Sentence | denotes | With a simple approach, we give a preliminary assessment of individual seriousness of COVID-19 using well-described case series of hospitalised COVID-19 pneumonia patients from the cities of Wuhan, Beijing, Shenzhen and the provinces of Hubei and Zhejiang [5-12]. |
| T21 | 272-661 | Sentence | denotes | We defined a reference group from a well-known setting: in 73 German sentinel hospitals, we extracted the data of all inpatients diagnosed with pneumonia (International Classification of Diseases, 10th revision codes J12-J18, primary diagnosis [13]) that were admitted during three consecutive weeks, after the start and before the peak of the influenza epidemic in the years 2015 to 2019. |
| T22 | 662-861 | Sentence | denotes | We compared severity parameters that were described for COVID-19 patients (acute respiratory distress syndrome, ventilation, intensive care, case fatality) with those from the German sentinel system. |
| T23 | 862-968 | Sentence | denotes | Furthermore, we stratified parameters by potential risk groups such as age, sex and chronic comorbidities. |
| T24 | 969-1092 | Sentence | denotes | We also compared outcomes and risk factors for critically ill patients (i.e. received intensive care and ventilation) [14]. |
| T25 | 1093-1312 | Sentence | denotes | As the Chinese population is younger, with a larger proportion of males compared with the German population, we applied weights and provided crude and adjusted proportions for the sentinel pneumonia patients (SPP) [15]. |
| T26 | 1313-1476 | Sentence | denotes | This approach, which can be used by other countries using syndromic surveillance, attempts to replicate the uncertainty of initial results for the new coronavirus. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T5 | 161-170 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T6 | 416-425 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T7 | 743-763 | Phenotype | denotes | respiratory distress | http://purl.obolibrary.org/obo/HP_0002098 |
| T8 | 1282-1291 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32186278-32112886-29336346 | 265-266 | 32112886 | denotes | 5 |
| 32186278-32007143-29336346 | 265-266 | 32007143 | denotes | 5 |
| 32186278-32404696-29336346 | 265-266 | 32404696 | denotes | 5 |
| 32186278-32075786-29336346 | 265-266 | 32075786 | denotes | 5 |
| 32186278-32105632-29336347 | 1088-1090 | 32105632 | denotes | 14 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32186278-32112886-29336346 | 265-266 | 32112886 | denotes | 5 |
| 32186278-32007143-29336346 | 265-266 | 32007143 | denotes | 5 |
| 32186278-32404696-29336346 | 265-266 | 32404696 | denotes | 5 |
| 32186278-32075786-29336346 | 265-266 | 32075786 | denotes | 5 |
| 32186278-32105632-29336347 | 1088-1090 | 32105632 | denotes | 14 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 56 | 171-179 | Species | denotes | patients | Tax:9606 |
| 57 | 727-735 | Species | denotes | patients | Tax:9606 |
| 58 | 1031-1039 | Species | denotes | patients | Tax:9606 |
| 59 | 1292-1300 | Species | denotes | patients | Tax:9606 |
| 60 | 1460-1475 | Species | denotes | new coronavirus | Tax:2697049 |
| 61 | 94-102 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 62 | 152-170 | Disease | denotes | COVID-19 pneumonia | MESH:C000657245 |
| 63 | 416-425 | Disease | denotes | pneumonia | MESH:D011014 |
| 64 | 718-726 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 65 | 737-772 | Disease | denotes | acute respiratory distress syndrome | MESH:D012128 |
| 66 | 1016-1030 | Disease | denotes | critically ill | MESH:D016638 |
| 67 | 1282-1291 | Disease | denotes | pneumonia | MESH:D011014 |