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PMC:7094172 / 31658-32341 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T525 45-49 SP_9 denotes MERS
T524 50-59 PG_4 denotes N Protein
T523 74-83 CHEBI:36357;CHEBI:36357 denotes compounds
T522 120-124 SP_9 denotes MERS
T521 152-160 SP_9 denotes MERS-CoV
T520 220-224 CHEBI:23888;CHEBI:23888 denotes drug
T519 280-284 CHEBI:23888;CHEBI:23888 denotes drug
T518 359-368 CHEBI:36357;CHEBI:36357 denotes compounds
T517 383-392 PG_4 denotes N protein
T516 398-407 PG_4 denotes N protein
T515 465-473 CHEBI:36357;CHEBI:36357 denotes compound

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T146 52-59 Body_part denotes Protein http://purl.org/sig/ont/fma/fma67257
T147 385-392 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T148 400-407 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T113 163-166 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T235 133-134 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T236 261-269 http://purl.obolibrary.org/obo/OBI_0100026 denotes Organics
T237 261-269 http://purl.obolibrary.org/obo/UBERON_0000468 denotes Organics
T238 442-443 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T239 504-505 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T240 680-682 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T241 680-682 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T294 25-28 Chemical denotes PPI http://purl.obolibrary.org/obo/CHEBI_53266|http://purl.obolibrary.org/obo/CHEBI_60614
T296 52-59 Chemical denotes Protein http://purl.obolibrary.org/obo/CHEBI_16541
T297 108-111 Chemical denotes PPI http://purl.obolibrary.org/obo/CHEBI_53266|http://purl.obolibrary.org/obo/CHEBI_60614
T299 179-182 Chemical denotes H37 http://purl.obolibrary.org/obo/CHEBI_34780
T300 220-224 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T301 280-284 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T302 385-392 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T303 400-407 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T304 569-576 Chemical denotes ligands http://purl.obolibrary.org/obo/CHEBI_52214
T305 680-682 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T243 0-59 Sentence denotes Discovery of Orthosteric PPI Stabilizers for MERS N Protein
T244 60-235 Sentence denotes To screen for compounds that induce hydrophobic PPI between MERS N-NTDs, a model of dimeric MERS-CoV N-NTD without the H37 and M38 residues was used in virtual drug screening.
T245 236-393 Sentence denotes The Sigma-Aldrich, Acros Organics, and ZINC drug databases were screened with LIBDOCK molecular docking software to obtain compounds acting on the N protein.
T246 394-459 Sentence denotes The N protein binding pocket was represented by a set of spheres.
T247 460-528 Sentence denotes Each compound in the database was docked in a pocket comprising W43.
T248 529-683 Sentence denotes The hydrophobic complementarity between ligands and receptors was calculated with PLATINUM.31 Compounds with higher docking scores are listed in Table S2.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
504 152-160 Species denotes MERS-CoV Tax:1335626
505 162-166 Chemical denotes -NTD
506 611-619 Chemical denotes PLATINUM MESH:D010984
507 120-131 Disease denotes MERS N-NTDs MESH:D018352

2_test

Id Subject Object Predicate Lexical cue
32105468-19244385-61929528 620-622 19244385 denotes 31